RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 AKNAQ7Z591 1439 aa28.99■■■□□ 2.23
CIRBP-245ENST00000621399 GPATCH8Q9UKJ3 1502 aaKnown RBP28.99■■■□□ 2.23
CIRBP-245ENST00000621399 NCOA2Q15596 1464 aa28.98■■■□□ 2.23
CIRBP-245ENST00000621399 SUPT6HQ7KZ85 1726 aaKnown RBP28.97■■■□□ 2.23
CIRBP-245ENST00000621399 CFAP74Q9C0B2 1584 aa28.96■■■□□ 2.23
CIRBP-245ENST00000621399 CFDP1Q9UEE9 299 aaPredicted RBP28.95■■■□□ 2.22
CIRBP-245ENST00000621399 PREX2Q70Z35 1606 aa28.94■■■□□ 2.22
CIRBP-245ENST00000621399 ZNF777Q9ULD5 760 aaPredicted RBP28.93■■■□□ 2.22
CIRBP-245ENST00000621399 CDC42BPAQ5VT25 1732 aa28.91■■■□□ 2.22
CIRBP-245ENST00000621399 CDC42BPBQ9Y5S2 1711 aa28.91■■■□□ 2.22
CIRBP-245ENST00000621399 RAPGEF3O95398 923 aa28.9■■■□□ 2.22
CIRBP-245ENST00000621399 ADGRL1O94910 1474 aa28.9■■■□□ 2.22
CIRBP-245ENST00000621399 SCAPERQ9BY12 1400 aa28.88■■■□□ 2.21
CIRBP-245ENST00000621399 DENND4BO75064 1496 aaPredicted RBP28.87■■■□□ 2.21
CIRBP-245ENST00000621399 PPARGC1BQ86YN6 1023 aaKnown RBP28.82■■■□□ 2.2
CIRBP-245ENST00000621399 ITSN2Q9NZM3 1697 aa28.82■■■□□ 2.2
CIRBP-245ENST00000621399 ZNF644Q9H582 1327 aaPredicted RBP28.79■■■□□ 2.2
CIRBP-245ENST00000621399 MYOM3Q5VTT5 1437 aa28.78■■■□□ 2.2
CIRBP-245ENST00000621399 POGZQ7Z3K3 1410 aa28.77■■■□□ 2.2
CIRBP-245ENST00000621399 SAMD9LQ8IVG5 1584 aa28.77■■■□□ 2.2
CIRBP-245ENST00000621399 ABCC1P33527 1531 aa28.77■■■□□ 2.2
CIRBP-245ENST00000621399 HNRNPMP52272 730 aaKnown RBP eCLIP28.76■■■□□ 2.19
CIRBP-245ENST00000621399 PLEKHH2Q8IVE3 1493 aa28.76■■■□□ 2.19
CIRBP-245ENST00000621399 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
CIRBP-245ENST00000621399 ARHGEF12Q9NZN5 1544 aa28.74■■■□□ 2.19
CIRBP-245ENST00000621399 KIAA1107Q9UPP5 1409 aa28.74■■■□□ 2.19
CIRBP-245ENST00000621399 FRMPD1Q5SYB0 1578 aa28.74■■■□□ 2.19
CIRBP-245ENST00000621399 MIA2Q96PC5 1412 aa28.72■■■□□ 2.19
CIRBP-245ENST00000621399 ZNF518AQ6AHZ1 1483 aa28.72■■■□□ 2.19
CIRBP-245ENST00000621399 RICTORQ6R327 1708 aa28.72■■■□□ 2.19
CIRBP-245ENST00000621399 TRAPPC8Q9Y2L5 1435 aa28.71■■■□□ 2.19
CIRBP-245ENST00000621399 SYCP2Q9BX26 1530 aa28.7■■■□□ 2.19
CIRBP-245ENST00000621399 CAMSAP2Q08AD1 1489 aa28.69■■■□□ 2.18
CIRBP-245ENST00000621399 MYT1LQ9UL68 1186 aa28.67■■■□□ 2.18
CIRBP-245ENST00000621399 FGD6Q6ZV73 1430 aa28.65■■■□□ 2.18
CIRBP-245ENST00000621399 ZMYM4Q5VZL5 1548 aa28.64■■■□□ 2.18
CIRBP-245ENST00000621399 MAGI2Q86UL8 1455 aa28.63■■■□□ 2.17
CIRBP-245ENST00000621399 MBD5Q9P267 1494 aa28.63■■■□□ 2.17
CIRBP-245ENST00000621399 KDM5CP41229 1560 aa28.62■■■□□ 2.17
CIRBP-245ENST00000621399 RSPH4AQ5TD94 716 aa28.61■■■□□ 2.17
CIRBP-245ENST00000621399 SPAG9O60271 1321 aaKnown RBP28.6■■■□□ 2.17
CIRBP-245ENST00000621399 YEATS2Q9ULM3 1422 aa28.59■■■□□ 2.17
CIRBP-245ENST00000621399 ZFYVE16Q7Z3T8 1539 aa28.59■■■□□ 2.17
CIRBP-245ENST00000621399 MLH3Q9UHC1 1453 aa28.58■■■□□ 2.17
CIRBP-245ENST00000621399 PTPN23Q9H3S7 1636 aa28.57■■■□□ 2.16
CIRBP-245ENST00000621399 CCDC141Q6ZP82 1450 aa28.55■■■□□ 2.16
CIRBP-245ENST00000621399 TCOF1Q13428 1488 aaKnown RBP28.54■■■□□ 2.16
CIRBP-245ENST00000621399 FAM50AQ14320 339 aaKnown RBP28.54■■■□□ 2.16
CIRBP-245ENST00000621399 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
CIRBP-245ENST00000621399 ARHGEF40Q8TER5 1519 aa28.53■■■□□ 2.16
CIRBP-245ENST00000621399 TSPY4P0CV99 314 aa28.53■■■□□ 2.16
CIRBP-245ENST00000621399 TSPY10P0CW01 314 aa28.53■■■□□ 2.16
CIRBP-245ENST00000621399 ARHGEF5Q12774 1597 aa28.52■■■□□ 2.16
CIRBP-245ENST00000621399 ATP10AO60312 1499 aa28.49■■■□□ 2.15
CIRBP-245ENST00000621399 KDM4FA0A1W2PPD8 638 aa28.49■■■□□ 2.15
CIRBP-245ENST00000621399 ARID4BQ4LE39 1312 aaPredicted RBP28.47■■■□□ 2.15
CIRBP-245ENST00000621399 ATP7AQ04656 1500 aa28.46■■■□□ 2.15
CIRBP-245ENST00000621399 RTEL1-TNFRSF6BF6WH68 1400 aa28.45■■■□□ 2.15
CIRBP-245ENST00000621399 KIDINS220Q9ULH0 1771 aa28.45■■■□□ 2.14
CIRBP-245ENST00000621399 INO80Q9ULG1 1556 aaPredicted RBP28.44■■■□□ 2.14
CIRBP-245ENST00000621399 ABCC5O15440 1437 aa28.43■■■□□ 2.14
CIRBP-245ENST00000621399 C9orf84Q5VXU9 1444 aa28.43■■■□□ 2.14
CIRBP-245ENST00000621399 DIP2CQ9Y2E4 1556 aa28.43■■■□□ 2.14
CIRBP-245ENST00000621399 ABCA6Q8N139 1617 aa28.42■■■□□ 2.14
CIRBP-245ENST00000621399 DAPK1P53355 1430 aa28.41■■■□□ 2.14
CIRBP-245ENST00000621399 DNMT1P26358 1616 aaKnown RBP28.37■■■□□ 2.13
CIRBP-245ENST00000621399 RRBP1Q9P2E9 1410 aaKnown RBP28.36■■■□□ 2.13
CIRBP-245ENST00000621399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.36■■■□□ 2.13
CIRBP-245ENST00000621399 CHIC2Q9UKJ5 165 aa28.35■■■□□ 2.13
CIRBP-245ENST00000621399 MAST1Q9Y2H9 1570 aa28.35■■■□□ 2.13
CIRBP-245ENST00000621399 SHANK2Q9UPX8 1470 aa28.34■■■□□ 2.13
CIRBP-245ENST00000621399 A2MP01023 1474 aa28.34■■■□□ 2.13
CIRBP-245ENST00000621399 REREQ9P2R6 1566 aa28.33■■■□□ 2.12
CIRBP-245ENST00000621399 ITGAEP38570 1179 aa28.32■■■□□ 2.12
CIRBP-245ENST00000621399 MLECQ14165 292 aa28.32■■■□□ 2.12
CIRBP-245ENST00000621399 SIGLEC1Q9BZZ2 1709 aa28.29■■■□□ 2.12
CIRBP-245ENST00000621399 CROCC2H7BZ55 1655 aa28.29■■■□□ 2.12
CIRBP-245ENST00000621399 DHX29Q7Z478 1369 aaKnown RBP28.29■■■□□ 2.12
CIRBP-245ENST00000621399 RRP7BPQ9NSQ0 103 aa28.28■■■□□ 2.12
CIRBP-245ENST00000621399 ANKRD30AQ9BXX3 1397 aa28.27■■■□□ 2.12
CIRBP-245ENST00000621399 ADGBQ8N7X0 1667 aa28.27■■■□□ 2.12
CIRBP-245ENST00000621399 AGLP35573 1532 aa28.27■■■□□ 2.12
CIRBP-245ENST00000621399 PTPRKQ15262 1439 aa28.25■■■□□ 2.11
CIRBP-245ENST00000621399 PLXNC1O60486 1568 aa28.24■■■□□ 2.11
CIRBP-245ENST00000621399 KIF15Q9NS87 1388 aa28.24■■■□□ 2.11
CIRBP-245ENST00000621399 BCORL1Q5H9F3 1711 aa28.22■■■□□ 2.11
CIRBP-245ENST00000621399 NCOA1Q15788 1441 aa28.21■■■□□ 2.11
CIRBP-245ENST00000621399 KIF3BO15066 747 aa28.2■■■□□ 2.1
CIRBP-245ENST00000621399 ADGRL2O95490 1459 aa28.19■■■□□ 2.1
CIRBP-245ENST00000621399 DUOX2Q9NRD8 1548 aa28.18■■■□□ 2.1
CIRBP-245ENST00000621399 GGT6Q6P531 493 aa28.18■■■□□ 2.1
CIRBP-245ENST00000621399 ADAMTSL3P82987 1691 aa28.16■■■□□ 2.1
CIRBP-245ENST00000621399 ROCK1Q13464 1354 aa28.14■■■□□ 2.1
CIRBP-245ENST00000621399 ESF1Q9H501 851 aaKnown RBP28.14■■■□□ 2.1
CIRBP-245ENST00000621399 MADDQ8WXG6 1647 aa28.11■■■□□ 2.09
CIRBP-245ENST00000621399 ERBINQ96RT1 1412 aa28.11■■■□□ 2.09
CIRBP-245ENST00000621399 PPP6R1Q9UPN7 881 aa28.07■■■□□ 2.08
CIRBP-245ENST00000621399 ANKRD50Q9ULJ7 1429 aa28.06■■■□□ 2.08
CIRBP-245ENST00000621399 EIF2AK4Q9P2K8 1649 aaKnown RBP28.05■■■□□ 2.08
CIRBP-245ENST00000621399 PTPRMP28827 1452 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms