RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 CDK13Q14004 1512 aaKnown RBP14.63□□□□□ -0.07
CDH1-214ENST00000621016 NBPF8Q3BBV2 869 aa14.63□□□□□ -0.07
CDH1-214ENST00000621016 CFAP43Q8NDM7 1665 aa14.62□□□□□ -0.07
CDH1-214ENST00000621016 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
CDH1-214ENST00000621016 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
CDH1-214ENST00000621016 MYT1LQ9UL68 1186 aa14.61□□□□□ -0.07
CDH1-214ENST00000621016 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
CDH1-214ENST00000621016 CFDP1Q9UEE9 299 aaPredicted RBP14.6□□□□□ -0.07
CDH1-214ENST00000621016 ZMYND15Q9H091 742 aa14.59□□□□□ -0.07
CDH1-214ENST00000621016 PTPN23Q9H3S7 1636 aa14.58□□□□□ -0.08
CDH1-214ENST00000621016 CDK11AQ9UQ88 783 aaPredicted RBP14.58□□□□□ -0.08
CDH1-214ENST00000621016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDH1-214ENST00000621016 MAGI3Q5TCQ9 1506 aa14.57□□□□□ -0.08
CDH1-214ENST00000621016 B4GALNT3Q6L9W6 998 aa14.56□□□□□ -0.08
CDH1-214ENST00000621016 GRIN2BQ13224 1484 aa14.56□□□□□ -0.08
CDH1-214ENST00000621016 CUL7Q14999 1698 aa14.55□□□□□ -0.08
CDH1-214ENST00000621016 FANCIQ9NVI1 1328 aa14.54□□□□□ -0.08
CDH1-214ENST00000621016 PKD2Q13563 968 aa14.53□□□□□ -0.08
CDH1-214ENST00000621016 PRKRIP1Q9H875 184 aaPredicted RBP14.53□□□□□ -0.08
CDH1-214ENST00000621016 CTTNBP2Q8WZ74 1663 aa14.53□□□□□ -0.08
CDH1-214ENST00000621016 EPRSP07814 1512 aaKnown RBP14.52□□□□□ -0.09
CDH1-214ENST00000621016 ZNF608Q9ULD9 1512 aaPredicted RBP14.52□□□□□ -0.09
CDH1-214ENST00000621016 BRPF3Q9ULD4 1205 aa14.51□□□□□ -0.09
CDH1-214ENST00000621016 KDM6BO15054 1643 aa14.51□□□□□ -0.09
CDH1-214ENST00000621016 RGL3Q3MIN7 710 aa14.5□□□□□ -0.09
CDH1-214ENST00000621016 SUPT6HQ7KZ85 1726 aaKnown RBP14.5□□□□□ -0.09
CDH1-214ENST00000621016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
CDH1-214ENST00000621016 NOP58Q9Y2X3 529 aaKnown RBP14.49□□□□□ -0.09
CDH1-214ENST00000621016 KIF7Q2M1P5 1343 aa14.49□□□□□ -0.09
CDH1-214ENST00000621016 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
CDH1-214ENST00000621016 EHBP1L1Q8N3D4 1523 aa14.48□□□□□ -0.09
CDH1-214ENST00000621016 THOC2Q8NI27 1593 aaKnown RBP14.48□□□□□ -0.09
CDH1-214ENST00000621016 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
CDH1-214ENST00000621016 LRRIQ1Q96JM4 1722 aa14.47□□□□□ -0.09
CDH1-214ENST00000621016 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
CDH1-214ENST00000621016 UGGT2Q9NYU1 1516 aa14.47□□□□□ -0.09
CDH1-214ENST00000621016 HNRNPMP52272 730 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDH1-214ENST00000621016 DENND4BO75064 1496 aaPredicted RBP14.45□□□□□ -0.1
CDH1-214ENST00000621016 KIF21AQ7Z4S6 1674 aa14.45□□□□□ -0.1
CDH1-214ENST00000621016 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
CDH1-214ENST00000621016 SAMD9Q5K651 1589 aa14.44□□□□□ -0.1
CDH1-214ENST00000621016 PLEKHD1A6NEE1 506 aa14.44□□□□□ -0.1
CDH1-214ENST00000621016 DCAF11Q8TEB1 546 aa14.44□□□□□ -0.1
CDH1-214ENST00000621016 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
CDH1-214ENST00000621016 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
CDH1-214ENST00000621016 TMC1Q8TDI8 760 aa14.43□□□□□ -0.1
CDH1-214ENST00000621016 ABCC5O15440 1437 aa14.42□□□□□ -0.1
CDH1-214ENST00000621016 IQGAP2Q13576 1575 aa14.42□□□□□ -0.1
CDH1-214ENST00000621016 ANKRD30BQ9BXX2 1392 aa14.42□□□□□ -0.1
CDH1-214ENST00000621016 DAPK1P53355 1430 aa14.42□□□□□ -0.1
CDH1-214ENST00000621016 TSPY4P0CV99 314 aa14.41□□□□□ -0.1
CDH1-214ENST00000621016 TSPY10P0CW01 314 aa14.41□□□□□ -0.1
CDH1-214ENST00000621016 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
CDH1-214ENST00000621016 LAS1LQ9Y4W2 734 aaKnown RBP14.41□□□□□ -0.1
CDH1-214ENST00000621016 NUP155O75694 1391 aa14.4□□□□□ -0.1
CDH1-214ENST00000621016 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
CDH1-214ENST00000621016 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
CDH1-214ENST00000621016 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
CDH1-214ENST00000621016 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
CDH1-214ENST00000621016 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
CDH1-214ENST00000621016 GLIPR1L2Q4G1C9 344 aa14.38□□□□□ -0.11
CDH1-214ENST00000621016 HECW1Q76N89 1606 aa14.38□□□□□ -0.11
CDH1-214ENST00000621016 MIA2Q96PC5 1412 aa14.37□□□□□ -0.11
CDH1-214ENST00000621016 USP47Q96K76 1375 aa14.36□□□□□ -0.11
CDH1-214ENST00000621016 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
CDH1-214ENST00000621016 NUP153P49790 1475 aaKnown RBP14.35□□□□□ -0.11
CDH1-214ENST00000621016 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
CDH1-214ENST00000621016 NCOA1Q15788 1441 aa14.33□□□□□ -0.11
CDH1-214ENST00000621016 PDE4CQ08493 712 aa14.33□□□□□ -0.12
CDH1-214ENST00000621016 AKNAQ7Z591 1439 aa14.33□□□□□ -0.12
CDH1-214ENST00000621016 TCOF1Q13428 1488 aaKnown RBP14.33□□□□□ -0.12
CDH1-214ENST00000621016 NPM2Q86SE8 214 aaKnown RBP14.32□□□□□ -0.12
CDH1-214ENST00000621016 RPRD2Q5VT52 1461 aaKnown RBP14.32□□□□□ -0.12
CDH1-214ENST00000621016 CC2D1BQ5T0F9 858 aaKnown RBP14.31□□□□□ -0.12
CDH1-214ENST00000621016 ZBED9Q6R2W3 1325 aa14.31□□□□□ -0.12
CDH1-214ENST00000621016 WDR62O43379 1518 aa14.31□□□□□ -0.12
CDH1-214ENST00000621016 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
CDH1-214ENST00000621016 RBM10P98175 930 aaKnown RBP14.31□□□□□ -0.12
CDH1-214ENST00000621016 NEFMP07197 916 aa14.3□□□□□ -0.12
CDH1-214ENST00000621016 DISP1Q96F81 1524 aa14.3□□□□□ -0.12
CDH1-214ENST00000621016 ANKRD30AQ9BXX3 1397 aa14.3□□□□□ -0.12
CDH1-214ENST00000621016 BCL11BQ9C0K0 894 aaPredicted RBP14.3□□□□□ -0.12
CDH1-214ENST00000621016 ARID4BQ4LE39 1312 aaPredicted RBP14.3□□□□□ -0.12
CDH1-214ENST00000621016 KIAA0586Q9BVV6 1533 aa14.3□□□□□ -0.12
CDH1-214ENST00000621016 NBPF1Q3BBV0 1214 aa14.29□□□□□ -0.12
CDH1-214ENST00000621016 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
CDH1-214ENST00000621016 ANKRD50Q9ULJ7 1429 aa14.29□□□□□ -0.12
CDH1-214ENST00000621016 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
CDH1-214ENST00000621016 CAMSAP2Q08AD1 1489 aa14.27□□□□□ -0.13
CDH1-214ENST00000621016 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.13
CDH1-214ENST00000621016 GRIN2AQ12879 1464 aa14.26□□□□□ -0.13
CDH1-214ENST00000621016 ROCK1Q13464 1354 aa14.26□□□□□ -0.13
CDH1-214ENST00000621016 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
CDH1-214ENST00000621016 GPATCH8Q9UKJ3 1502 aaKnown RBP14.25□□□□□ -0.13
CDH1-214ENST00000621016 TEX14Q8IWB6 1497 aa14.25□□□□□ -0.13
CDH1-214ENST00000621016 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
CDH1-214ENST00000621016 KIAA1107Q9UPP5 1409 aa14.24□□□□□ -0.13
CDH1-214ENST00000621016 ROCK2O75116 1388 aaKnown RBP14.24□□□□□ -0.13
CDH1-214ENST00000621016 PZPP20742 1482 aa14.24□□□□□ -0.13
CDH1-214ENST00000621016 CARMIL2Q6F5E8 1435 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms