RNA–Protein interactions for RNA: ENST00000619917.4

POLR2E-214, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5 BASIC

Gene POLR2E, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-214ENST00000619917 VPS8Q8N3P4 1428 aa34.51■■■■□ 3.12
POLR2E-214ENST00000619917 MTUS2Q5JR59 1369 aa34.49■■■■□ 3.11
POLR2E-214ENST00000619917 CDC42BPBQ9Y5S2 1711 aa34.49■■■■□ 3.11
POLR2E-214ENST00000619917 PREX2Q70Z35 1606 aa34.46■■■■□ 3.11
POLR2E-214ENST00000619917 POGZQ7Z3K3 1410 aa34.44■■■■□ 3.1
POLR2E-214ENST00000619917 CDC42BPAQ5VT25 1732 aa34.43■■■■□ 3.1
POLR2E-214ENST00000619917 GPATCH8Q9UKJ3 1502 aaKnown RBP34.41■■■■□ 3.1
POLR2E-214ENST00000619917 ZMYM4Q5VZL5 1548 aa34.4■■■■□ 3.1
POLR2E-214ENST00000619917 EHBP1L1Q8N3D4 1523 aa34.39■■■■□ 3.1
POLR2E-214ENST00000619917 YEATS2Q9ULM3 1422 aa34.36■■■■□ 3.09
POLR2E-214ENST00000619917 ARHGEF40Q8TER5 1519 aa34.35■■■■□ 3.09
POLR2E-214ENST00000619917 TIAM1Q13009 1591 aa34.35■■■■□ 3.09
POLR2E-214ENST00000619917 ARHGEF12Q9NZN5 1544 aa34.35■■■■□ 3.09
POLR2E-214ENST00000619917 AFAP1Q8N556 730 aa34.34■■■■□ 3.09
POLR2E-214ENST00000619917 CCNB3Q8WWL7 1395 aa34.34■■■■□ 3.09
POLR2E-214ENST00000619917 ZNF777Q9ULD5 760 aaPredicted RBP34.32■■■■□ 3.08
POLR2E-214ENST00000619917 MAGI2Q86UL8 1455 aa34.32■■■■□ 3.08
POLR2E-214ENST00000619917 ABCC1P33527 1531 aa34.31■■■■□ 3.08
POLR2E-214ENST00000619917 ZFYVE16Q7Z3T8 1539 aa34.31■■■■□ 3.08
POLR2E-214ENST00000619917 ZNF518AQ6AHZ1 1483 aa34.29■■■■□ 3.08
POLR2E-214ENST00000619917 TRAPPC8Q9Y2L5 1435 aa34.29■■■■□ 3.08
POLR2E-214ENST00000619917 CFDP1Q9UEE9 299 aaPredicted RBP34.28■■■■□ 3.08
POLR2E-214ENST00000619917 SAMD9LQ8IVG5 1584 aa34.27■■■■□ 3.08
POLR2E-214ENST00000619917 KDM5CP41229 1560 aa34.26■■■■□ 3.07
POLR2E-214ENST00000619917 ITSN2Q9NZM3 1697 aa34.24■■■■□ 3.07
POLR2E-214ENST00000619917 ARID4BQ4LE39 1312 aaPredicted RBP34.24■■■■□ 3.07
POLR2E-214ENST00000619917 NCOA2Q15596 1464 aa34.23■■■■□ 3.07
POLR2E-214ENST00000619917 LRRC9Q6ZRR7 1453 aa34.23■■■■□ 3.07
POLR2E-214ENST00000619917 KANK4Q5T7N3 995 aaPredicted RBP34.23■■■■□ 3.07
POLR2E-214ENST00000619917 MAP3K1Q13233 1512 aa34.21■■■■□ 3.07
POLR2E-214ENST00000619917 SIGLEC1Q9BZZ2 1709 aa34.19■■■■□ 3.06
POLR2E-214ENST00000619917 HNRNPMP52272 730 aaKnown RBP eCLIP34.19■■■■□ 3.06
POLR2E-214ENST00000619917 SUPT6HQ7KZ85 1726 aaKnown RBP34.18■■■■□ 3.06
POLR2E-214ENST00000619917 SYCP2Q9BX26 1530 aa34.18■■■■□ 3.06
POLR2E-214ENST00000619917 ZNF644Q9H582 1327 aaPredicted RBP34.17■■■■□ 3.06
POLR2E-214ENST00000619917 ATP10AO60312 1499 aa34.16■■■■□ 3.06
POLR2E-214ENST00000619917 MYT1LQ9UL68 1186 aa34.15■■■■□ 3.06
POLR2E-214ENST00000619917 ADAMTSL3P82987 1691 aa34.15■■■■□ 3.06
POLR2E-214ENST00000619917 HECW2Q9P2P5 1572 aa34.15■■■■□ 3.06
POLR2E-214ENST00000619917 MLH3Q9UHC1 1453 aa34.14■■■■□ 3.06
POLR2E-214ENST00000619917 KIAA1107Q9UPP5 1409 aa34.14■■■■□ 3.06
POLR2E-214ENST00000619917 BCORL1Q5H9F3 1711 aa34.14■■■■□ 3.06
POLR2E-214ENST00000619917 PLEKHH2Q8IVE3 1493 aa34.12■■■■□ 3.05
POLR2E-214ENST00000619917 C9orf84Q5VXU9 1444 aa34.11■■■■□ 3.05
POLR2E-214ENST00000619917 DIP2CQ9Y2E4 1556 aa34.08■■■■□ 3.05
POLR2E-214ENST00000619917 ABCA6Q8N139 1617 aa34.06■■■■□ 3.04
POLR2E-214ENST00000619917 APLP2Q06481 763 aa34.05■■■■□ 3.04
POLR2E-214ENST00000619917 KIDINS220Q9ULH0 1771 aa34.05■■■■□ 3.04
POLR2E-214ENST00000619917 MLECQ14165 292 aa34.04■■■■□ 3.04
POLR2E-214ENST00000619917 MADDQ8WXG6 1647 aa34.04■■■■□ 3.04
POLR2E-214ENST00000619917 MBD5Q9P267 1494 aa34.03■■■■□ 3.04
POLR2E-214ENST00000619917 SPAG9O60271 1321 aaKnown RBP34.03■■■■□ 3.04
POLR2E-214ENST00000619917 PTPRMP28827 1452 aa34■■■■□ 3.03
POLR2E-214ENST00000619917 CAMSAP2Q08AD1 1489 aa33.98■■■■□ 3.03
POLR2E-214ENST00000619917 REREQ9P2R6 1566 aa33.97■■■■□ 3.03
POLR2E-214ENST00000619917 ATP7AQ04656 1500 aa33.94■■■■□ 3.02
POLR2E-214ENST00000619917 INO80Q9ULG1 1556 aaPredicted RBP33.93■■■■□ 3.02
POLR2E-214ENST00000619917 RIMS1Q86UR5 1692 aaKnown RBP33.92■■■■□ 3.02
POLR2E-214ENST00000619917 MYOM3Q5VTT5 1437 aa33.91■■■■□ 3.02
POLR2E-214ENST00000619917 AGLP35573 1532 aa33.88■■■■□ 3.01
POLR2E-214ENST00000619917 CCDC141Q6ZP82 1450 aa33.86■■■■□ 3.01
POLR2E-214ENST00000619917 MIA2Q96PC5 1412 aa33.86■■■■□ 3.01
POLR2E-214ENST00000619917 RSPH4AQ5TD94 716 aa33.83■■■■□ 3.01
POLR2E-214ENST00000619917 FER1L4A9Z1Z3 1794 aa33.83■■■■□ 3.01
POLR2E-214ENST00000619917 RTEL1-TNFRSF6BF6WH68 1400 aa33.82■■■■□ 3
POLR2E-214ENST00000619917 PLPPR3Q6T4P5 718 aa33.81■■■■□ 3
POLR2E-214ENST00000619917 ARHGEF5Q12774 1597 aa33.81■■■■□ 3
POLR2E-214ENST00000619917 A2MP01023 1474 aa33.8■■■■□ 3
POLR2E-214ENST00000619917 PLXNC1O60486 1568 aa33.77■■■■□ 3
POLR2E-214ENST00000619917 TSPY4P0CV99 314 aa33.72■■■□□ 2.99
POLR2E-214ENST00000619917 TSPY10P0CW01 314 aa33.72■■■□□ 2.99
POLR2E-214ENST00000619917 ADGBQ8N7X0 1667 aa33.71■■■□□ 2.99
POLR2E-214ENST00000619917 CEBPAP49715 358 aaPredicted RBP33.71■■■□□ 2.99
POLR2E-214ENST00000619917 FGD6Q6ZV73 1430 aa33.7■■■□□ 2.99
POLR2E-214ENST00000619917 PTPN23Q9H3S7 1636 aa33.69■■■□□ 2.98
POLR2E-214ENST00000619917 DHX29Q7Z478 1369 aaKnown RBP33.68■■■□□ 2.98
POLR2E-214ENST00000619917 TCOF1Q13428 1488 aaKnown RBP33.63■■■□□ 2.97
POLR2E-214ENST00000619917 MAST1Q9Y2H9 1570 aa33.63■■■□□ 2.97
POLR2E-214ENST00000619917 GGT6Q6P531 493 aa33.62■■■□□ 2.97
POLR2E-214ENST00000619917 ESF1Q9H501 851 aaKnown RBP33.62■■■□□ 2.97
POLR2E-214ENST00000619917 ABCC5O15440 1437 aa33.61■■■□□ 2.97
POLR2E-214ENST00000619917 LMTK3Q96Q04 1460 aa33.58■■■□□ 2.97
POLR2E-214ENST00000619917 PPARGC1BQ86YN6 1023 aaKnown RBP33.58■■■□□ 2.97
POLR2E-214ENST00000619917 CNTLNQ9NXG0 1405 aa33.57■■■□□ 2.96
POLR2E-214ENST00000619917 KIF3BO15066 747 aa33.56■■■□□ 2.96
POLR2E-214ENST00000619917 C3P01024 1663 aa33.55■■■□□ 2.96
POLR2E-214ENST00000619917 DAPK1P53355 1430 aa33.54■■■□□ 2.96
POLR2E-214ENST00000619917 DNMT1P26358 1616 aaKnown RBP33.51■■■□□ 2.96
POLR2E-214ENST00000619917 SHANK2Q9UPX8 1470 aa33.5■■■□□ 2.95
POLR2E-214ENST00000619917 ZMYM3Q14202 1370 aa33.5■■■□□ 2.95
POLR2E-214ENST00000619917 CROCC2H7BZ55 1655 aa33.5■■■□□ 2.95
POLR2E-214ENST00000619917 CLTCQ00610 1675 aaKnown RBP33.48■■■□□ 2.95
POLR2E-214ENST00000619917 FAM50AQ14320 339 aaKnown RBP33.48■■■□□ 2.95
POLR2E-214ENST00000619917 PPP6R1Q9UPN7 881 aa33.48■■■□□ 2.95
POLR2E-214ENST00000619917 HSPA2P54652 639 aa33.47■■■□□ 2.95
POLR2E-214ENST00000619917 MROH2AA6NES4 1674 aa33.46■■■□□ 2.95
POLR2E-214ENST00000619917 CHIC2Q9UKJ5 165 aa33.44■■■□□ 2.94
POLR2E-214ENST00000619917 RRP7BPQ9NSQ0 103 aa33.43■■■□□ 2.94
POLR2E-214ENST00000619917 KIF15Q9NS87 1388 aa33.42■■■□□ 2.94
POLR2E-214ENST00000619917 PREX1Q8TCU6 1659 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms