RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	B4GALNT3	Q6L9W6	998 aa		19.79	■□□□□ 0.76
SMTN-223	ENST00000619644	KDM5B	Q9UGL1	1544 aa		19.77	■□□□□ 0.76
SMTN-223	ENST00000619644	CCDC7	Q96M83	1385 aa		19.77	■□□□□ 0.75
SMTN-223	ENST00000619644	CNTLN	Q9NXG0	1405 aa		19.77	■□□□□ 0.75
SMTN-223	ENST00000619644	DENND4B	O75064	1496 aa	Predicted RBP	19.76	■□□□□ 0.75
SMTN-223	ENST00000619644	MYT1L	Q9UL68	1186 aa		19.76	■□□□□ 0.75
SMTN-223	ENST00000619644	HECW1	Q76N89	1606 aa		19.75	■□□□□ 0.75
SMTN-223	ENST00000619644	THOC2	Q8NI27	1593 aa	Known RBP	19.75	■□□□□ 0.75
SMTN-223	ENST00000619644	CFDP1	Q9UEE9	299 aa	Predicted RBP	19.74	■□□□□ 0.75
SMTN-223	ENST00000619644	KIF7	Q2M1P5	1343 aa		19.73	■□□□□ 0.75
SMTN-223	ENST00000619644	DEK	P35659	375 aa	Known RBP	19.73	■□□□□ 0.75
SMTN-223	ENST00000619644	IQGAP2	Q13576	1575 aa		19.73	■□□□□ 0.75
SMTN-223	ENST00000619644	KIF21A	Q7Z4S6	1674 aa		19.73	■□□□□ 0.75
SMTN-223	ENST00000619644	PPP4R2	Q9NY27	417 aa		19.71	■□□□□ 0.75
SMTN-223	ENST00000619644	ERICH6B	Q5W0A0	696 aa		19.7	■□□□□ 0.74
SMTN-223	ENST00000619644	TCOF1	Q13428	1488 aa	Known RBP	19.7	■□□□□ 0.74
SMTN-223	ENST00000619644	MIA2	Q96PC5	1412 aa		19.7	■□□□□ 0.74
SMTN-223	ENST00000619644	KDM2A	Q9Y2K7	1162 aa		19.69	■□□□□ 0.74
SMTN-223	ENST00000619644	DAPK1	P53355	1430 aa		19.69	■□□□□ 0.74
SMTN-223	ENST00000619644	ARHGEF11	O15085	1522 aa		19.68	■□□□□ 0.74
SMTN-223	ENST00000619644	ANKRD30B	Q9BXX2	1392 aa		19.68	■□□□□ 0.74
SMTN-223	ENST00000619644	PKD2	Q13563	968 aa		19.66	■□□□□ 0.74
SMTN-223	ENST00000619644	ABCC5	O15440	1437 aa		19.65	■□□□□ 0.74
SMTN-223	ENST00000619644	NCOA1	Q15788	1441 aa		19.65	■□□□□ 0.74
SMTN-223	ENST00000619644	GCC2	Q8IWJ2	1684 aa		19.65	■□□□□ 0.74
SMTN-223	ENST00000619644	CHMP7	Q8WUX9	453 aa	Predicted RBP	19.64	■□□□□ 0.73
SMTN-223	ENST00000619644	TARBP1	Q13395	1621 aa	Known RBP	19.64	■□□□□ 0.73
SMTN-223	ENST00000619644	ZNF608	Q9ULD9	1512 aa	Predicted RBP	19.62	■□□□□ 0.73
SMTN-223	ENST00000619644	ZBED9	Q6R2W3	1325 aa		19.62	■□□□□ 0.73
SMTN-223	ENST00000619644	PRG4	Q92954	1404 aa	Predicted RBP	19.62	■□□□□ 0.73
SMTN-223	ENST00000619644	RPRD2	Q5VT52	1461 aa	Known RBP	19.62	■□□□□ 0.73
SMTN-223	ENST00000619644	WDR62	O43379	1518 aa		19.61	■□□□□ 0.73
SMTN-223	ENST00000619644	SALL2	Q9Y467	1007 aa	Predicted RBP	19.61	■□□□□ 0.73
SMTN-223	ENST00000619644	AKNA	Q7Z591	1439 aa		19.61	■□□□□ 0.73
SMTN-223	ENST00000619644	PBRM1	Q86U86	1689 aa		19.6	■□□□□ 0.73
SMTN-223	ENST00000619644	TMC1	Q8TDI8	760 aa		19.59	■□□□□ 0.73
SMTN-223	ENST00000619644	NOP58	Q9Y2X3	529 aa	Known RBP	19.59	■□□□□ 0.73
SMTN-223	ENST00000619644	PRKCSH	P14314	528 aa	Predicted RBP	19.57	■□□□□ 0.72
SMTN-223	ENST00000619644	NBR1	Q14596	966 aa		19.57	■□□□□ 0.72
SMTN-223	ENST00000619644	CARD11	Q9BXL7	1154 aa		19.57	■□□□□ 0.72
SMTN-223	ENST00000619644	USP47	Q96K76	1375 aa		19.57	■□□□□ 0.72
SMTN-223	ENST00000619644	ADAMTS12	P58397	1594 aa		19.56	■□□□□ 0.72
SMTN-223	ENST00000619644	ROCK1	Q13464	1354 aa		19.56	■□□□□ 0.72
SMTN-223	ENST00000619644	NUP153	P49790	1475 aa	Known RBP	19.54	■□□□□ 0.72
SMTN-223	ENST00000619644	CCDC136	Q96JN2	1154 aa		19.54	■□□□□ 0.72
SMTN-223	ENST00000619644	TEX14	Q8IWB6	1497 aa		19.54	■□□□□ 0.72
SMTN-223	ENST00000619644	PAK3	O75914	559 aa	Predicted RBP	19.53	■□□□□ 0.72
SMTN-223	ENST00000619644	NUP155	O75694	1391 aa		19.52	■□□□□ 0.71
SMTN-223	ENST00000619644	MRC2	Q9UBG0	1479 aa		19.52	■□□□□ 0.71
SMTN-223	ENST00000619644	DCAF11	Q8TEB1	546 aa		19.51	■□□□□ 0.71
SMTN-223	ENST00000619644	PLB1	Q6P1J6	1458 aa		19.51	■□□□□ 0.71
SMTN-223	ENST00000619644	PLEKHD1	A6NEE1	506 aa		19.51	■□□□□ 0.71
SMTN-223	ENST00000619644	TSPY4	P0CV99	314 aa		19.5	■□□□□ 0.71
SMTN-223	ENST00000619644	TSPY10	P0CW01	314 aa		19.5	■□□□□ 0.71
SMTN-223	ENST00000619644	DISP1	Q96F81	1524 aa		19.49	■□□□□ 0.71
SMTN-223	ENST00000619644	KIAA0586	Q9BVV6	1533 aa		19.49	■□□□□ 0.71
SMTN-223	ENST00000619644	RGL3	Q3MIN7	710 aa		19.49	■□□□□ 0.71
SMTN-223	ENST00000619644	CAMSAP2	Q08AD1	1489 aa		19.49	■□□□□ 0.71
SMTN-223	ENST00000619644	DNMT1	P26358	1616 aa	Known RBP	19.48	■□□□□ 0.71
SMTN-223	ENST00000619644	ANKRD30A	Q9BXX3	1397 aa		19.48	■□□□□ 0.71
SMTN-223	ENST00000619644	SPATA31E1	Q6ZUB1	1445 aa		19.48	■□□□□ 0.71
SMTN-223	ENST00000619644	ST20-MTHFS	A0A0A6YYL1	179 aa		19.48	■□□□□ 0.71
SMTN-223	ENST00000619644	HNRNPM	P52272	730 aa	Known RBP eCLIP	19.47	■□□□□ 0.71
SMTN-223	ENST00000619644	NUDC	Q9Y266	331 aa		19.47	■□□□□ 0.71
SMTN-223	ENST00000619644	TRO	Q12816	1431 aa	Predicted RBP	19.46	■□□□□ 0.71
SMTN-223	ENST00000619644	KIAA0556	O60303	1618 aa		19.46	■□□□□ 0.71
SMTN-223	ENST00000619644	JPH4	Q96JJ6	628 aa		19.46	■□□□□ 0.71
SMTN-223	ENST00000619644	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	19.46	■□□□□ 0.71	1e-7	■□□□□ 10.9
SMTN-223	ENST00000619644	PZP	P20742	1482 aa		19.46	■□□□□ 0.71
SMTN-223	ENST00000619644	KIAA1107	Q9UPP5	1409 aa		19.46	■□□□□ 0.71
SMTN-223	ENST00000619644	RAPGEF6	Q8TEU7	1601 aa		19.45	■□□□□ 0.7
SMTN-223	ENST00000619644	ANKRD50	Q9ULJ7	1429 aa		19.44	■□□□□ 0.7
SMTN-223	ENST00000619644	GRIN2A	Q12879	1464 aa		19.42	■□□□□ 0.7
SMTN-223	ENST00000619644	IFT140	Q96RY7	1462 aa		19.42	■□□□□ 0.7
SMTN-223	ENST00000619644	DHX29	Q7Z478	1369 aa	Known RBP	19.41	■□□□□ 0.7
SMTN-223	ENST00000619644	GPATCH8	Q9UKJ3	1502 aa	Known RBP	19.41	■□□□□ 0.7
SMTN-223	ENST00000619644	PNISR	Q8TF01	805 aa	Known RBP	19.39	■□□□□ 0.69
SMTN-223	ENST00000619644	ERCC6	Q03468	1493 aa		19.39	■□□□□ 0.69
SMTN-223	ENST00000619644	ANP32A	P39687	249 aa	Known RBP	19.38	■□□□□ 0.69
SMTN-223	ENST00000619644	KIF14	Q15058	1648 aa		19.37	■□□□□ 0.69
SMTN-223	ENST00000619644	IPO9	Q96P70	1041 aa	Known RBP	19.37	■□□□□ 0.69
SMTN-223	ENST00000619644	RTL5	Q5HYW3	569 aa	Predicted RBP	19.37	■□□□□ 0.69
SMTN-223	ENST00000619644	NPM2	Q86SE8	214 aa	Known RBP	19.36	■□□□□ 0.69
SMTN-223	ENST00000619644	ANO8	Q9HCE9	1232 aa	Predicted RBP	19.36	■□□□□ 0.69
SMTN-223	ENST00000619644	CARMIL2	Q6F5E8	1435 aa		19.36	■□□□□ 0.69
SMTN-223	ENST00000619644	SMG6	Q86US8	1419 aa	Known RBP	19.36	■□□□□ 0.69
SMTN-223	ENST00000619644	ROCK2	O75116	1388 aa	Known RBP	19.35	■□□□□ 0.69
SMTN-223	ENST00000619644	CC2D1B	Q5T0F9	858 aa	Known RBP	19.34	■□□□□ 0.69
SMTN-223	ENST00000619644	BCORL1	Q5H9F3	1711 aa		19.34	■□□□□ 0.69
SMTN-223	ENST00000619644	ZBTB47	Q9UFB7	747 aa	Predicted RBP	19.32	■□□□□ 0.68
SMTN-223	ENST00000619644	C9orf84	Q5VXU9	1444 aa		19.32	■□□□□ 0.68
SMTN-223	ENST00000619644	KIF15	Q9NS87	1388 aa		19.32	■□□□□ 0.68
SMTN-223	ENST00000619644	NBPF1	Q3BBV0	1214 aa		19.29	■□□□□ 0.68
SMTN-223	ENST00000619644	EIF4G3	O43432	1585 aa	Known RBP	19.29	■□□□□ 0.68
SMTN-223	ENST00000619644	MYBBP1A	Q9BQG0	1328 aa	Known RBP	19.29	■□□□□ 0.68
SMTN-223	ENST00000619644	EXOC6	Q8TAG9	804 aa		19.28	■□□□□ 0.68
SMTN-223	ENST00000619644	ITSN2	Q9NZM3	1697 aa		19.27	■□□□□ 0.67
SMTN-223	ENST00000619644	ARID4B	Q4LE39	1312 aa	Predicted RBP	19.26	■□□□□ 0.67
SMTN-223	ENST00000619644	MBD5	Q9P267	1494 aa		19.26	■□□□□ 0.67
SMTN-223	ENST00000619644	RALBP1	Q15311	655 aa		19.26	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms