RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 LRRIQ1Q96JM4 1722 aa18.27■□□□□ 0.52
TARDBP-221ENST00000619555 TROQ12816 1431 aaPredicted RBP18.27■□□□□ 0.52
TARDBP-221ENST00000619555 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
TARDBP-221ENST00000619555 POGZQ7Z3K3 1410 aa18.26■□□□□ 0.51
TARDBP-221ENST00000619555 SIGLEC1Q9BZZ2 1709 aa18.25■□□□□ 0.51
TARDBP-221ENST00000619555 MAGI2Q86UL8 1455 aa18.25■□□□□ 0.51
TARDBP-221ENST00000619555 RIMS1Q86UR5 1692 aaKnown RBP18.23■□□□□ 0.51
TARDBP-221ENST00000619555 MLECQ14165 292 aa18.23■□□□□ 0.51
TARDBP-221ENST00000619555 CLIP1P30622 1438 aa18.23■□□□□ 0.51
TARDBP-221ENST00000619555 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
TARDBP-221ENST00000619555 CASKIN1Q8WXD9 1431 aa18.22■□□□□ 0.51
TARDBP-221ENST00000619555 PCF11O94913 1555 aaKnown RBP18.21■□□□□ 0.51
TARDBP-221ENST00000619555 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
TARDBP-221ENST00000619555 AFAP1Q8N556 730 aa18.19■□□□□ 0.5
TARDBP-221ENST00000619555 ATP10AO60312 1499 aa18.18■□□□□ 0.5
TARDBP-221ENST00000619555 CCDC18Q5T9S5 1454 aa18.16■□□□□ 0.5
TARDBP-221ENST00000619555 LMTK3Q96Q04 1460 aa18.16■□□□□ 0.5
TARDBP-221ENST00000619555 CDC42BPBQ9Y5S2 1711 aa18.16■□□□□ 0.5
TARDBP-221ENST00000619555 C9orf84Q5VXU9 1444 aa18.15■□□□□ 0.5
TARDBP-221ENST00000619555 ZNF518AQ6AHZ1 1483 aa18.14■□□□□ 0.5
TARDBP-221ENST00000619555 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
TARDBP-221ENST00000619555 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
TARDBP-221ENST00000619555 HSPA2P54652 639 aa18.12■□□□□ 0.49
TARDBP-221ENST00000619555 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
TARDBP-221ENST00000619555 KDM5CP41229 1560 aa18.12■□□□□ 0.49
TARDBP-221ENST00000619555 ARHGEF12Q9NZN5 1544 aa18.11■□□□□ 0.49
TARDBP-221ENST00000619555 PREX2Q70Z35 1606 aa18.11■□□□□ 0.49
TARDBP-221ENST00000619555 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
TARDBP-221ENST00000619555 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
TARDBP-221ENST00000619555 CEBPAP49715 358 aaPredicted RBP18.08■□□□□ 0.48
TARDBP-221ENST00000619555 CDC42BPAQ5VT25 1732 aa18.08■□□□□ 0.48
TARDBP-221ENST00000619555 ABCC1P33527 1531 aa18.08■□□□□ 0.48
TARDBP-221ENST00000619555 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
TARDBP-221ENST00000619555 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
TARDBP-221ENST00000619555 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
TARDBP-221ENST00000619555 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
TARDBP-221ENST00000619555 ABCA6Q8N139 1617 aa18.05■□□□□ 0.48
TARDBP-221ENST00000619555 GPATCH8Q9UKJ3 1502 aaKnown RBP18.03■□□□□ 0.48
TARDBP-221ENST00000619555 REREQ9P2R6 1566 aa18.01■□□□□ 0.47
TARDBP-221ENST00000619555 FBXO41Q8TF61 875 aa18.01■□□□□ 0.47
TARDBP-221ENST00000619555 KIDINS220Q9ULH0 1771 aa18■□□□□ 0.47
TARDBP-221ENST00000619555 HNRNPMP52272 730 aaKnown RBP eCLIP18■□□□□ 0.47
TARDBP-221ENST00000619555 SAMD9LQ8IVG5 1584 aa18■□□□□ 0.47
TARDBP-221ENST00000619555 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
TARDBP-221ENST00000619555 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
TARDBP-221ENST00000619555 AGLP35573 1532 aa17.98■□□□□ 0.47
TARDBP-221ENST00000619555 SYCP2Q9BX26 1530 aa17.98■□□□□ 0.47
TARDBP-221ENST00000619555 MTUS2Q5JR59 1369 aa17.97■□□□□ 0.47
TARDBP-221ENST00000619555 SETD1BQ9UPS6 1966 aaKnown RBP17.97■□□□□ 0.47
TARDBP-221ENST00000619555 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
TARDBP-221ENST00000619555 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
TARDBP-221ENST00000619555 SPAG9O60271 1321 aaKnown RBP17.96■□□□□ 0.46
TARDBP-221ENST00000619555 ESF1Q9H501 851 aaKnown RBP17.95■□□□□ 0.46
TARDBP-221ENST00000619555 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
TARDBP-221ENST00000619555 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
TARDBP-221ENST00000619555 C3P01024 1663 aa17.92■□□□□ 0.46
TARDBP-221ENST00000619555 ZNF644Q9H582 1327 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-221ENST00000619555 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
TARDBP-221ENST00000619555 PLEKHH2Q8IVE3 1493 aa17.91■□□□□ 0.46
TARDBP-221ENST00000619555 SUPT6HQ7KZ85 1726 aaKnown RBP17.89■□□□□ 0.45
TARDBP-221ENST00000619555 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
TARDBP-221ENST00000619555 TIAM1Q13009 1591 aa17.88■□□□□ 0.45
TARDBP-221ENST00000619555 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
TARDBP-221ENST00000619555 CERKQ8TCT0 537 aa17.87■□□□□ 0.45
TARDBP-221ENST00000619555 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
TARDBP-221ENST00000619555 STRCQ7RTU9 1775 aa17.86■□□□□ 0.45
TARDBP-221ENST00000619555 LOC105371045A0A1W2PR82 267 aa17.86■□□□□ 0.45
TARDBP-221ENST00000619555 INO80Q9ULG1 1556 aaPredicted RBP17.86■□□□□ 0.45
TARDBP-221ENST00000619555 A2MP01023 1474 aa17.85■□□□□ 0.45
TARDBP-221ENST00000619555 ZMYM3Q14202 1370 aa17.84■□□□□ 0.45
TARDBP-221ENST00000619555 MBD5Q9P267 1494 aa17.83■□□□□ 0.45
TARDBP-221ENST00000619555 GGT6Q6P531 493 aa17.83■□□□□ 0.44
TARDBP-221ENST00000619555 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
TARDBP-221ENST00000619555 PLXNC1O60486 1568 aa17.83■□□□□ 0.44
TARDBP-221ENST00000619555 NCOA2Q15596 1464 aa17.81■□□□□ 0.44
TARDBP-221ENST00000619555 MROH2AA6NES4 1674 aa17.8■□□□□ 0.44
TARDBP-221ENST00000619555 CLTCQ00610 1675 aaKnown RBP17.79■□□□□ 0.44
TARDBP-221ENST00000619555 ADGBQ8N7X0 1667 aa17.78■□□□□ 0.44
TARDBP-221ENST00000619555 NPATQ14207 1427 aa17.78■□□□□ 0.44
TARDBP-221ENST00000619555 RTEL1-TNFRSF6BF6WH68 1400 aa17.77■□□□□ 0.44
TARDBP-221ENST00000619555 PTPRTO14522 1441 aa17.76■□□□□ 0.43
TARDBP-221ENST00000619555 DHX29Q7Z478 1369 aaKnown RBP17.75■□□□□ 0.43
TARDBP-221ENST00000619555 CAMSAP2Q08AD1 1489 aa17.75■□□□□ 0.43
TARDBP-221ENST00000619555 NCOA1Q15788 1441 aa17.74■□□□□ 0.43
TARDBP-221ENST00000619555 VPS8Q8N3P4 1428 aa17.74■□□□□ 0.43
TARDBP-221ENST00000619555 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
TARDBP-221ENST00000619555 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
TARDBP-221ENST00000619555 PTPRKQ15262 1439 aa17.73■□□□□ 0.43
TARDBP-221ENST00000619555 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
TARDBP-221ENST00000619555 KIF3BO15066 747 aa17.72■□□□□ 0.43
TARDBP-221ENST00000619555 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
TARDBP-221ENST00000619555 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
TARDBP-221ENST00000619555 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.43
TARDBP-221ENST00000619555 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
TARDBP-221ENST00000619555 MYO3AQ8NEV4 1616 aa17.69■□□□□ 0.42
TARDBP-221ENST00000619555 TSPY4P0CV99 314 aa17.67■□□□□ 0.42
TARDBP-221ENST00000619555 TSPY10P0CW01 314 aa17.67■□□□□ 0.42
TARDBP-221ENST00000619555 ARHGEF5Q12774 1597 aa17.66■□□□□ 0.42
TARDBP-221ENST00000619555 LTBP4Q8N2S1 1624 aa17.66■□□□□ 0.42
TARDBP-221ENST00000619555 FBXO31Q5XUX0 539 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms