RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 RICTORQ6R327 1708 aa33.21■■■□□ 2.91
SGMS1-210ENST00000619438 DENND4BO75064 1496 aaPredicted RBP33.2■■■□□ 2.9
SGMS1-210ENST00000619438 ADGRL1O94910 1474 aa33.19■■■□□ 2.9
SGMS1-210ENST00000619438 ARHGAP5Q13017 1502 aa33.17■■■□□ 2.9
SGMS1-210ENST00000619438 SCAPERQ9BY12 1400 aa33.15■■■□□ 2.9
SGMS1-210ENST00000619438 CDC42BPBQ9Y5S2 1711 aa33.14■■■□□ 2.9
SGMS1-210ENST00000619438 ZNF777Q9ULD5 760 aaPredicted RBP33.1■■■□□ 2.89
SGMS1-210ENST00000619438 PREX2Q70Z35 1606 aa33.09■■■□□ 2.89
SGMS1-210ENST00000619438 APLP2Q06481 763 aa33.09■■■□□ 2.89
SGMS1-210ENST00000619438 CDC42BPAQ5VT25 1732 aa33.08■■■□□ 2.89
SGMS1-210ENST00000619438 CCNB3Q8WWL7 1395 aa33.08■■■□□ 2.89
SGMS1-210ENST00000619438 CFDP1Q9UEE9 299 aaPredicted RBP33.05■■■□□ 2.88
SGMS1-210ENST00000619438 EHBP1L1Q8N3D4 1523 aa33.04■■■□□ 2.88
SGMS1-210ENST00000619438 POGZQ7Z3K3 1410 aa33.03■■■□□ 2.88
SGMS1-210ENST00000619438 ZMYM4Q5VZL5 1548 aa33.03■■■□□ 2.88
SGMS1-210ENST00000619438 ARHGEF40Q8TER5 1519 aa33.02■■■□□ 2.88
SGMS1-210ENST00000619438 GPATCH8Q9UKJ3 1502 aaKnown RBP33.02■■■□□ 2.88
SGMS1-210ENST00000619438 MYT1LQ9UL68 1186 aa33.01■■■□□ 2.88
SGMS1-210ENST00000619438 TIAM1Q13009 1591 aa33■■■□□ 2.87
SGMS1-210ENST00000619438 AFAP1Q8N556 730 aa33■■■□□ 2.87
SGMS1-210ENST00000619438 ARID4BQ4LE39 1312 aaPredicted RBP32.96■■■□□ 2.87
SGMS1-210ENST00000619438 ZFYVE16Q7Z3T8 1539 aa32.96■■■□□ 2.87
SGMS1-210ENST00000619438 YEATS2Q9ULM3 1422 aa32.95■■■□□ 2.87
SGMS1-210ENST00000619438 KANK4Q5T7N3 995 aaPredicted RBP32.94■■■□□ 2.86
SGMS1-210ENST00000619438 MAGI2Q86UL8 1455 aa32.93■■■□□ 2.86
SGMS1-210ENST00000619438 ZNF518AQ6AHZ1 1483 aa32.93■■■□□ 2.86
SGMS1-210ENST00000619438 LRRC9Q6ZRR7 1453 aa32.93■■■□□ 2.86
SGMS1-210ENST00000619438 ABCC1P33527 1531 aa32.91■■■□□ 2.86
SGMS1-210ENST00000619438 MAP3K1Q13233 1512 aa32.9■■■□□ 2.86
SGMS1-210ENST00000619438 HNRNPMP52272 730 aaKnown RBP eCLIP32.9■■■□□ 2.862e-6■■■■□ 21.2
SGMS1-210ENST00000619438 ITSN2Q9NZM3 1697 aa32.89■■■□□ 2.86
SGMS1-210ENST00000619438 NCOA2Q15596 1464 aa32.89■■■□□ 2.86
SGMS1-210ENST00000619438 ARHGEF12Q9NZN5 1544 aa32.89■■■□□ 2.86
SGMS1-210ENST00000619438 SUPT6HQ7KZ85 1726 aaKnown RBP32.87■■■□□ 2.85
SGMS1-210ENST00000619438 KDM5CP41229 1560 aa32.87■■■□□ 2.85
SGMS1-210ENST00000619438 BCORL1Q5H9F3 1711 aa32.86■■■□□ 2.85
SGMS1-210ENST00000619438 SIGLEC1Q9BZZ2 1709 aa32.86■■■□□ 2.85
SGMS1-210ENST00000619438 SAMD9LQ8IVG5 1584 aa32.86■■■□□ 2.85
SGMS1-210ENST00000619438 TRAPPC8Q9Y2L5 1435 aa32.85■■■□□ 2.85
SGMS1-210ENST00000619438 ADAMTSL3P82987 1691 aa32.84■■■□□ 2.85
SGMS1-210ENST00000619438 ZNF644Q9H582 1327 aaPredicted RBP32.83■■■□□ 2.85
SGMS1-210ENST00000619438 HECW2Q9P2P5 1572 aa32.81■■■□□ 2.84
SGMS1-210ENST00000619438 PLEKHH2Q8IVE3 1493 aa32.81■■■□□ 2.84
SGMS1-210ENST00000619438 KIAA1107Q9UPP5 1409 aa32.79■■■□□ 2.84
SGMS1-210ENST00000619438 SYCP2Q9BX26 1530 aa32.78■■■□□ 2.84
SGMS1-210ENST00000619438 PPARGC1BQ86YN6 1023 aaKnown RBP32.78■■■□□ 2.84
SGMS1-210ENST00000619438 ATP10AO60312 1499 aa32.77■■■□□ 2.84
SGMS1-210ENST00000619438 MADDQ8WXG6 1647 aa32.76■■■□□ 2.83
SGMS1-210ENST00000619438 SPAG9O60271 1321 aaKnown RBP32.76■■■□□ 2.83
SGMS1-210ENST00000619438 ZEB1P37275 1124 aaPredicted RBP32.75■■■□□ 2.83
SGMS1-210ENST00000619438 MLH3Q9UHC1 1453 aa32.73■■■□□ 2.83
SGMS1-210ENST00000619438 C9orf84Q5VXU9 1444 aa32.73■■■□□ 2.83
SGMS1-210ENST00000619438 DIP2CQ9Y2E4 1556 aa32.72■■■□□ 2.83
SGMS1-210ENST00000619438 ABCA6Q8N139 1617 aa32.72■■■□□ 2.83
SGMS1-210ENST00000619438 MLECQ14165 292 aa32.72■■■□□ 2.83
SGMS1-210ENST00000619438 KIDINS220Q9ULH0 1771 aa32.7■■■□□ 2.83
SGMS1-210ENST00000619438 PTPRMP28827 1452 aa32.68■■■□□ 2.82
SGMS1-210ENST00000619438 RIMS1Q86UR5 1692 aaKnown RBP32.67■■■□□ 2.82
SGMS1-210ENST00000619438 RSPH4AQ5TD94 716 aa32.66■■■□□ 2.82
SGMS1-210ENST00000619438 CAMSAP2Q08AD1 1489 aa32.63■■■□□ 2.81
SGMS1-210ENST00000619438 MYOM3Q5VTT5 1437 aa32.62■■■□□ 2.81
SGMS1-210ENST00000619438 MBD5Q9P267 1494 aa32.62■■■□□ 2.81
SGMS1-210ENST00000619438 FER1L4A9Z1Z3 1794 aa32.61■■■□□ 2.81
SGMS1-210ENST00000619438 REREQ9P2R6 1566 aa32.6■■■□□ 2.81
SGMS1-210ENST00000619438 TSPY4P0CV99 314 aa32.59■■■□□ 2.81
SGMS1-210ENST00000619438 TSPY10P0CW01 314 aa32.59■■■□□ 2.81
SGMS1-210ENST00000619438 MIA2Q96PC5 1412 aa32.58■■■□□ 2.81
SGMS1-210ENST00000619438 ATP7AQ04656 1500 aa32.57■■■□□ 2.8
SGMS1-210ENST00000619438 INO80Q9ULG1 1556 aaPredicted RBP32.56■■■□□ 2.8
SGMS1-210ENST00000619438 CCDC141Q6ZP82 1450 aa32.52■■■□□ 2.8
SGMS1-210ENST00000619438 PLPPR3Q6T4P5 718 aa32.52■■■□□ 2.8
SGMS1-210ENST00000619438 AGLP35573 1532 aa32.49■■■□□ 2.79
SGMS1-210ENST00000619438 RTEL1-TNFRSF6BF6WH68 1400 aa32.48■■■□□ 2.79
SGMS1-210ENST00000619438 ESF1Q9H501 851 aaKnown RBP32.48■■■□□ 2.79
SGMS1-210ENST00000619438 A2MP01023 1474 aa32.44■■■□□ 2.78
SGMS1-210ENST00000619438 ARHGEF5Q12774 1597 aa32.43■■■□□ 2.78
SGMS1-210ENST00000619438 FGD6Q6ZV73 1430 aa32.42■■■□□ 2.78
SGMS1-210ENST00000619438 ADGBQ8N7X0 1667 aa32.42■■■□□ 2.78
SGMS1-210ENST00000619438 PLXNC1O60486 1568 aa32.39■■■□□ 2.78
SGMS1-210ENST00000619438 GGT6Q6P531 493 aa32.38■■■□□ 2.77
SGMS1-210ENST00000619438 PTPN23Q9H3S7 1636 aa32.38■■■□□ 2.77
SGMS1-210ENST00000619438 FAM50AQ14320 339 aaKnown RBP32.37■■■□□ 2.77
SGMS1-210ENST00000619438 DHX29Q7Z478 1369 aaKnown RBP32.36■■■□□ 2.77
SGMS1-210ENST00000619438 CEBPAP49715 358 aaPredicted RBP32.34■■■□□ 2.77
SGMS1-210ENST00000619438 KIF3BO15066 747 aa32.31■■■□□ 2.76
SGMS1-210ENST00000619438 TCOF1Q13428 1488 aaKnown RBP32.29■■■□□ 2.76
SGMS1-210ENST00000619438 LMTK3Q96Q04 1460 aa32.29■■■□□ 2.76
SGMS1-210ENST00000619438 C3P01024 1663 aa32.29■■■□□ 2.76
SGMS1-210ENST00000619438 ABCC5O15440 1437 aa32.28■■■□□ 2.76
SGMS1-210ENST00000619438 CHIC2Q9UKJ5 165 aa32.26■■■□□ 2.75
SGMS1-210ENST00000619438 DAPK1P53355 1430 aa32.24■■■□□ 2.75
SGMS1-210ENST00000619438 RRP7BPQ9NSQ0 103 aa32.24■■■□□ 2.75
SGMS1-210ENST00000619438 PPP6R1Q9UPN7 881 aa32.23■■■□□ 2.75
SGMS1-210ENST00000619438 MAST1Q9Y2H9 1570 aa32.23■■■□□ 2.75
SGMS1-210ENST00000619438 CLTCQ00610 1675 aaKnown RBP32.22■■■□□ 2.75
SGMS1-210ENST00000619438 CNTLNQ9NXG0 1405 aa32.22■■■□□ 2.75
SGMS1-210ENST00000619438 PREX1Q8TCU6 1659 aa32.2■■■□□ 2.75
SGMS1-210ENST00000619438 MROH2AA6NES4 1674 aa32.19■■■□□ 2.74
SGMS1-210ENST00000619438 CROCC2H7BZ55 1655 aa32.17■■■□□ 2.74
SGMS1-210ENST00000619438 SHANK2Q9UPX8 1470 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms