RNA–Protein interactions for RNA: ENST00000619352.4

HMGN2-210, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-210ENST00000619352 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
HMGN2-210ENST00000619352 LSM11P83369 360 aaKnown RBP eCLIP12.42□□□□□ -0.424e-7■□□□□ 10.2
HMGN2-210ENST00000619352 SOX12O15370 315 aa12.41□□□□□ -0.42
HMGN2-210ENST00000619352 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
HMGN2-210ENST00000619352 ARSIQ5FYB1 569 aa12.4□□□□□ -0.42
HMGN2-210ENST00000619352 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
HMGN2-210ENST00000619352 PBX2P40425 430 aa12.36□□□□□ -0.43
HMGN2-210ENST00000619352 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
HMGN2-210ENST00000619352 PLA2G2EQ9NZK7 142 aa12.34□□□□□ -0.43
HMGN2-210ENST00000619352 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
HMGN2-210ENST00000619352 KHSRPQ92945 711 aaKnown RBP eCLIP12.29□□□□□ -0.443e-7■■■■□ 22.7
HMGN2-210ENST00000619352 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
HMGN2-210ENST00000619352 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
HMGN2-210ENST00000619352 KIF3CO14782 793 aa12.2□□□□□ -0.46
HMGN2-210ENST00000619352 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
HMGN2-210ENST00000619352 SLC34A2O95436 690 aa12.18□□□□□ -0.46
HMGN2-210ENST00000619352 NUDT7P0C024 238 aa12.18□□□□□ -0.46
HMGN2-210ENST00000619352 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
HMGN2-210ENST00000619352 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
HMGN2-210ENST00000619352 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
HMGN2-210ENST00000619352 LHX6Q9UPM6 363 aa12.17□□□□□ -0.46
HMGN2-210ENST00000619352 NLRP6P59044 892 aa12.16□□□□□ -0.46
HMGN2-210ENST00000619352 ADGRD1Q6QNK2 874 aa12.15□□□□□ -0.46
HMGN2-210ENST00000619352 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
HMGN2-210ENST00000619352 FBXO22Q8NEZ5 403 aa12.14□□□□□ -0.47
HMGN2-210ENST00000619352 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
HMGN2-210ENST00000619352 ARHGAP33O14559 1287 aa12.12□□□□□ -0.47
HMGN2-210ENST00000619352 TK2O00142 265 aa12.11□□□□□ -0.47
HMGN2-210ENST00000619352 PCDHGA4Q9Y5G9 962 aa12.11□□□□□ -0.47
HMGN2-210ENST00000619352 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
HMGN2-210ENST00000619352 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
HMGN2-210ENST00000619352 HRO43593 1189 aa12.08□□□□□ -0.48
HMGN2-210ENST00000619352 RGS20O76081 388 aa12.07□□□□□ -0.48
HMGN2-210ENST00000619352 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
HMGN2-210ENST00000619352 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
HMGN2-210ENST00000619352 MFRPQ9BY79 579 aa12□□□□□ -0.49
HMGN2-210ENST00000619352 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
HMGN2-210ENST00000619352 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
HMGN2-210ENST00000619352 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
HMGN2-210ENST00000619352 TMC2Q8TDI7 906 aa11.94□□□□□ -0.5
HMGN2-210ENST00000619352 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
HMGN2-210ENST00000619352 PTCD2Q8WV60 388 aaKnown RBP11.93□□□□□ -0.5
HMGN2-210ENST00000619352 STK24Q9Y6E0 443 aa11.92□□□□□ -0.5
HMGN2-210ENST00000619352 PSEN2P49810 448 aa11.91□□□□□ -0.5
HMGN2-210ENST00000619352 IRX2Q9BZI1 471 aaPredicted RBP11.9□□□□□ -0.5
HMGN2-210ENST00000619352 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
HMGN2-210ENST00000619352 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
HMGN2-210ENST00000619352 STK25O00506 426 aa11.83□□□□□ -0.52
HMGN2-210ENST00000619352 A0A0G2JS52 829 aa11.82□□□□□ -0.52
HMGN2-210ENST00000619352 VPS9D1Q9Y2B5 631 aa11.81□□□□□ -0.52
HMGN2-210ENST00000619352 KCNH8Q96L42 1107 aa11.8□□□□□ -0.52
HMGN2-210ENST00000619352 SLC4A5Q9BY07 1137 aa11.8□□□□□ -0.52
HMGN2-210ENST00000619352 PTPN5P54829 565 aa11.78□□□□□ -0.52
HMGN2-210ENST00000619352 FOXK1P85037 733 aa11.78□□□□□ -0.52
HMGN2-210ENST00000619352 TBC1D12O60347 775 aa11.76□□□□□ -0.53
HMGN2-210ENST00000619352 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
HMGN2-210ENST00000619352 KCNK17Q96T54 332 aa11.75□□□□□ -0.53
HMGN2-210ENST00000619352 BHMG1C9JSJ3 638 aaPredicted RBP11.74□□□□□ -0.53
HMGN2-210ENST00000619352 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
HMGN2-210ENST00000619352 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
HMGN2-210ENST00000619352 PPP1R37O75864 691 aa11.7□□□□□ -0.54
HMGN2-210ENST00000619352 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
HMGN2-210ENST00000619352 GPHNQ9NQX3 736 aaPredicted RBP11.69□□□□□ -0.54
HMGN2-210ENST00000619352 ECM2O94769 699 aaPredicted RBP11.68□□□□□ -0.54
HMGN2-210ENST00000619352 WNT2BQ93097 391 aa11.64□□□□□ -0.55
HMGN2-210ENST00000619352 DSG2Q14126 1118 aa11.62□□□□□ -0.55
HMGN2-210ENST00000619352 GOLGA8CPA6NN73 597 aa11.61□□□□□ -0.55
HMGN2-210ENST00000619352 RGL2O15211 777 aa11.61□□□□□ -0.55
HMGN2-210ENST00000619352 ITGBL1O95965 494 aaPredicted RBP11.61□□□□□ -0.55
HMGN2-210ENST00000619352 MRPL50Q8N5N7 158 aaKnown RBP11.61□□□□□ -0.55
HMGN2-210ENST00000619352 ZBED2Q9BTP6 218 aa11.61□□□□□ -0.55
HMGN2-210ENST00000619352 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
HMGN2-210ENST00000619352 ZNF454Q8N9F8 522 aa11.59□□□□□ -0.55
HMGN2-210ENST00000619352 PTPREP23469 700 aa11.58□□□□□ -0.56
HMGN2-210ENST00000619352 Q6ZNB5 142 aa11.57□□□□□ -0.56
HMGN2-210ENST00000619352 FOSBP53539 338 aa11.56□□□□□ -0.56
HMGN2-210ENST00000619352 NBPF3Q9H094 633 aa11.56□□□□□ -0.56
HMGN2-210ENST00000619352 BCANQ96GW7 911 aa11.55□□□□□ -0.56
HMGN2-210ENST00000619352 PKD2Q13563 968 aa11.53□□□□□ -0.56
HMGN2-210ENST00000619352 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.57
HMGN2-210ENST00000619352 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
HMGN2-210ENST00000619352 ANO8Q9HCE9 1232 aaPredicted RBP11.51□□□□□ -0.57
HMGN2-210ENST00000619352 LAPTM4AQ15012 233 aa11.5□□□□□ -0.57
HMGN2-210ENST00000619352 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
HMGN2-210ENST00000619352 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
HMGN2-210ENST00000619352 ZDHHC16Q969W1 377 aa11.45□□□□□ -0.58
HMGN2-210ENST00000619352 ANKK1Q8NFD2 765 aa11.44□□□□□ -0.58
HMGN2-210ENST00000619352 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGN2-210ENST00000619352 RABGEF1Q9UJ41 708 aa11.44□□□□□ -0.58
HMGN2-210ENST00000619352 LCE2BO14633 110 aa11.42□□□□□ -0.58
HMGN2-210ENST00000619352 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
HMGN2-210ENST00000619352 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
HMGN2-210ENST00000619352 TRAF7Q6Q0C0 670 aa11.4□□□□□ -0.58
HMGN2-210ENST00000619352 LAPTM4BQ86VI4 370 aa11.4□□□□□ -0.58
HMGN2-210ENST00000619352 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
HMGN2-210ENST00000619352 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.58
HMGN2-210ENST00000619352 SOWAHBA6NEL2 793 aa11.39□□□□□ -0.59
HMGN2-210ENST00000619352 PPP1R3GB7ZBB8 358 aa11.39□□□□□ -0.59
HMGN2-210ENST00000619352 KCNC4Q03721 635 aa11.39□□□□□ -0.59
HMGN2-210ENST00000619352 HS6ST3Q8IZP7 471 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms