RNA–Protein interactions for RNA: ENST00000618553.1

APOBEC3A-205, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-205ENST00000618553 CDK11AQ9UQ88 783 aaPredicted RBP20.4■□□□□ 0.86
APOBEC3A-205ENST00000618553 MAP3K4Q9Y6R4 1608 aa20.38■□□□□ 0.85
APOBEC3A-205ENST00000618553 KIF14Q15058 1648 aa20.36■□□□□ 0.85
APOBEC3A-205ENST00000618553 WDR7Q9Y4E6 1490 aa20.35■□□□□ 0.85
APOBEC3A-205ENST00000618553 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
APOBEC3A-205ENST00000618553 NCOA2Q15596 1464 aa20.32■□□□□ 0.84
APOBEC3A-205ENST00000618553 PLEKHD1A6NEE1 506 aa20.32■□□□□ 0.84
APOBEC3A-205ENST00000618553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
APOBEC3A-205ENST00000618553 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
APOBEC3A-205ENST00000618553 HECW2Q9P2P5 1572 aa20.29■□□□□ 0.84
APOBEC3A-205ENST00000618553 ABCA9Q8IUA7 1624 aa20.27■□□□□ 0.83
APOBEC3A-205ENST00000618553 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
APOBEC3A-205ENST00000618553 TEX14Q8IWB6 1497 aa20.26■□□□□ 0.83
APOBEC3A-205ENST00000618553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.26■□□□□ 0.83
APOBEC3A-205ENST00000618553 TTC37Q6PGP7 1564 aa20.24■□□□□ 0.83
APOBEC3A-205ENST00000618553 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
APOBEC3A-205ENST00000618553 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
APOBEC3A-205ENST00000618553 MYOM3Q5VTT5 1437 aa20.22■□□□□ 0.83
APOBEC3A-205ENST00000618553 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
APOBEC3A-205ENST00000618553 PREX2Q70Z35 1606 aa20.22■□□□□ 0.83
APOBEC3A-205ENST00000618553 MYO5CQ9NQX4 1742 aa20.22■□□□□ 0.83
APOBEC3A-205ENST00000618553 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
APOBEC3A-205ENST00000618553 ARAP3Q8WWN8 1544 aa20.21■□□□□ 0.83
APOBEC3A-205ENST00000618553 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
APOBEC3A-205ENST00000618553 MIA2Q96PC5 1412 aa20.19■□□□□ 0.82
APOBEC3A-205ENST00000618553 CDC42BPBQ9Y5S2 1711 aa20.17■□□□□ 0.82
APOBEC3A-205ENST00000618553 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
APOBEC3A-205ENST00000618553 CCNB3Q8WWL7 1395 aa20.17■□□□□ 0.82
APOBEC3A-205ENST00000618553 FGD6Q6ZV73 1430 aa20.17■□□□□ 0.82
APOBEC3A-205ENST00000618553 TCOF1Q13428 1488 aaKnown RBP20.14■□□□□ 0.81
APOBEC3A-205ENST00000618553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.14■□□□□ 0.81
APOBEC3A-205ENST00000618553 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
APOBEC3A-205ENST00000618553 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
APOBEC3A-205ENST00000618553 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
APOBEC3A-205ENST00000618553 PLCH2O75038 1416 aa20.12■□□□□ 0.81
APOBEC3A-205ENST00000618553 CFAP74Q9C0B2 1584 aa20.08■□□□□ 0.8
APOBEC3A-205ENST00000618553 C1QBPQ07021 282 aaKnown RBP20.06■□□□□ 0.8
APOBEC3A-205ENST00000618553 TRIM26Q12899 539 aaPredicted RBP20.06■□□□□ 0.8
APOBEC3A-205ENST00000618553 ARHGAP5Q13017 1502 aa20.06■□□□□ 0.8
APOBEC3A-205ENST00000618553 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
APOBEC3A-205ENST00000618553 CAMSAP2Q08AD1 1489 aa20.05■□□□□ 0.8
APOBEC3A-205ENST00000618553 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
APOBEC3A-205ENST00000618553 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
APOBEC3A-205ENST00000618553 PLEKHH2Q8IVE3 1493 aa20.02■□□□□ 0.8
APOBEC3A-205ENST00000618553 ARHGEF5Q12774 1597 aa20.01■□□□□ 0.79
APOBEC3A-205ENST00000618553 FANCAO15360 1455 aa20.01■□□□□ 0.79
APOBEC3A-205ENST00000618553 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
APOBEC3A-205ENST00000618553 ABCC1P33527 1531 aa20.01■□□□□ 0.79
APOBEC3A-205ENST00000618553 KIAA1107Q9UPP5 1409 aa20■□□□□ 0.79
APOBEC3A-205ENST00000618553 NEO1Q92859 1461 aa19.99■□□□□ 0.79
APOBEC3A-205ENST00000618553 CROCC2H7BZ55 1655 aa19.98■□□□□ 0.79
APOBEC3A-205ENST00000618553 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
APOBEC3A-205ENST00000618553 MBD5Q9P267 1494 aa19.96■□□□□ 0.79
APOBEC3A-205ENST00000618553 ADAMTSL3P82987 1691 aa19.95■□□□□ 0.78
APOBEC3A-205ENST00000618553 SYCP2Q9BX26 1530 aa19.95■□□□□ 0.78
APOBEC3A-205ENST00000618553 SHANK2Q9UPX8 1470 aa19.93■□□□□ 0.78
APOBEC3A-205ENST00000618553 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
APOBEC3A-205ENST00000618553 FBXO41Q8TF61 875 aa19.92■□□□□ 0.78
APOBEC3A-205ENST00000618553 DAPK1P53355 1430 aa19.92■□□□□ 0.78
APOBEC3A-205ENST00000618553 AKNAQ7Z591 1439 aa19.92■□□□□ 0.78
APOBEC3A-205ENST00000618553 PTPRMP28827 1452 aa19.92■□□□□ 0.78
APOBEC3A-205ENST00000618553 ARHGEF12Q9NZN5 1544 aa19.92■□□□□ 0.78
APOBEC3A-205ENST00000618553 FAM50AQ14320 339 aaKnown RBP19.91■□□□□ 0.78
APOBEC3A-205ENST00000618553 CCDC141Q6ZP82 1450 aa19.91■□□□□ 0.78
APOBEC3A-205ENST00000618553 MAST1Q9Y2H9 1570 aa19.91■□□□□ 0.78
APOBEC3A-205ENST00000618553 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
APOBEC3A-205ENST00000618553 ABCC5O15440 1437 aa19.9■□□□□ 0.78
APOBEC3A-205ENST00000618553 ADGBQ8N7X0 1667 aa19.88■□□□□ 0.77
APOBEC3A-205ENST00000618553 RSPH4AQ5TD94 716 aa19.88■□□□□ 0.77
APOBEC3A-205ENST00000618553 PTPRKQ15262 1439 aa19.87■□□□□ 0.77
APOBEC3A-205ENST00000618553 ZNF777Q9ULD5 760 aaPredicted RBP19.87■□□□□ 0.77
APOBEC3A-205ENST00000618553 BCORL1Q5H9F3 1711 aa19.87■□□□□ 0.77
APOBEC3A-205ENST00000618553 KDM5CP41229 1560 aa19.87■□□□□ 0.77
APOBEC3A-205ENST00000618553 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
APOBEC3A-205ENST00000618553 RICTORQ6R327 1708 aa19.85■□□□□ 0.77
APOBEC3A-205ENST00000618553 FRMPD1Q5SYB0 1578 aa19.85■□□□□ 0.77
APOBEC3A-205ENST00000618553 MADDQ8WXG6 1647 aa19.84■□□□□ 0.77
APOBEC3A-205ENST00000618553 ZNF518AQ6AHZ1 1483 aa19.84■□□□□ 0.77
APOBEC3A-205ENST00000618553 POGZQ7Z3K3 1410 aa19.84■□□□□ 0.77
APOBEC3A-205ENST00000618553 SCAPERQ9BY12 1400 aa19.84■□□□□ 0.77
APOBEC3A-205ENST00000618553 ROCK1Q13464 1354 aa19.83■□□□□ 0.77
APOBEC3A-205ENST00000618553 TRAPPC8Q9Y2L5 1435 aa19.83■□□□□ 0.76
APOBEC3A-205ENST00000618553 PLXNC1O60486 1568 aa19.83■□□□□ 0.76
APOBEC3A-205ENST00000618553 INO80Q9ULG1 1556 aaPredicted RBP19.83■□□□□ 0.76
APOBEC3A-205ENST00000618553 GCC2Q8IWJ2 1684 aa19.81■□□□□ 0.76
APOBEC3A-205ENST00000618553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.81■□□□□ 0.76
APOBEC3A-205ENST00000618553 C9orf84Q5VXU9 1444 aa19.81■□□□□ 0.76
APOBEC3A-205ENST00000618553 DENND4BO75064 1496 aaPredicted RBP19.8■□□□□ 0.76
APOBEC3A-205ENST00000618553 RTEL1-TNFRSF6BF6WH68 1400 aa19.8■□□□□ 0.76
APOBEC3A-205ENST00000618553 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
APOBEC3A-205ENST00000618553 PCGF6Q9BYE7 350 aa19.8■□□□□ 0.76
APOBEC3A-205ENST00000618553 ZMYM4Q5VZL5 1548 aa19.8■□□□□ 0.76
APOBEC3A-205ENST00000618553 ZFYVE16Q7Z3T8 1539 aa19.8■□□□□ 0.76
APOBEC3A-205ENST00000618553 ARID4BQ4LE39 1312 aaPredicted RBP19.78■□□□□ 0.76
APOBEC3A-205ENST00000618553 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
APOBEC3A-205ENST00000618553 LMTK3Q96Q04 1460 aa19.78■□□□□ 0.76
APOBEC3A-205ENST00000618553 RIMS1Q86UR5 1692 aaKnown RBP19.78■□□□□ 0.76
APOBEC3A-205ENST00000618553 NCOA1Q15788 1441 aa19.76■□□□□ 0.75
APOBEC3A-205ENST00000618553 MLH3Q9UHC1 1453 aa19.76■□□□□ 0.75
APOBEC3A-205ENST00000618553 ATP7AQ04656 1500 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms