RNA–Protein interactions for RNA: ENST00000618048.2

KCNMA1-224, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-224ENST00000618048 SCAPERQ9BY12 1400 aa35.24■■■■□ 3.23
KCNMA1-224ENST00000618048 KIF14Q15058 1648 aa35.23■■■■□ 3.23
KCNMA1-224ENST00000618048 RIMS1Q86UR5 1692 aaKnown RBP35.23■■■■□ 3.23
KCNMA1-224ENST00000618048 TROQ12816 1431 aaPredicted RBP35.2■■■■□ 3.23
KCNMA1-224ENST00000618048 SIGLEC1Q9BZZ2 1709 aa35.18■■■■□ 3.22
KCNMA1-224ENST00000618048 PCF11O94913 1555 aaKnown RBP35.17■■■■□ 3.22
KCNMA1-224ENST00000618048 CLIP1P30622 1438 aa35.17■■■■□ 3.22
KCNMA1-224ENST00000618048 EFCAB2Q5VUJ9 269 aa35.17■■■■□ 3.22
KCNMA1-224ENST00000618048 LRRIQ1Q96JM4 1722 aa35.15■■■■□ 3.22
KCNMA1-224ENST00000618048 LMTK3Q96Q04 1460 aa35.12■■■■□ 3.21
KCNMA1-224ENST00000618048 ARHGAP5Q13017 1502 aa35.11■■■■□ 3.21
KCNMA1-224ENST00000618048 ATP10AO60312 1499 aa35.06■■■■□ 3.2
KCNMA1-224ENST00000618048 ZNF518AQ6AHZ1 1483 aa35.06■■■■□ 3.2
KCNMA1-224ENST00000618048 C9orf84Q5VXU9 1444 aa35.05■■■■□ 3.2
KCNMA1-224ENST00000618048 CCDC18Q5T9S5 1454 aa35.04■■■■□ 3.2
KCNMA1-224ENST00000618048 CASKIN1Q8WXD9 1431 aa35.04■■■■□ 3.2
KCNMA1-224ENST00000618048 FER1L4A9Z1Z3 1794 aa35.03■■■■□ 3.2
KCNMA1-224ENST00000618048 MLECQ14165 292 aa35.03■■■■□ 3.2
KCNMA1-224ENST00000618048 KDM5CP41229 1560 aa35■■■■□ 3.19
KCNMA1-224ENST00000618048 PLPPR3Q6T4P5 718 aa35■■■■□ 3.19
KCNMA1-224ENST00000618048 ARHGEF12Q9NZN5 1544 aa34.97■■■■□ 3.19
KCNMA1-224ENST00000618048 PREX2Q70Z35 1606 aa34.96■■■■□ 3.19
KCNMA1-224ENST00000618048 CDC42BPBQ9Y5S2 1711 aa34.96■■■■□ 3.19
KCNMA1-224ENST00000618048 AFAP1Q8N556 730 aa34.94■■■■□ 3.18
KCNMA1-224ENST00000618048 FYCO1Q9BQS8 1478 aa34.93■■■■□ 3.18
KCNMA1-224ENST00000618048 DIP2CQ9Y2E4 1556 aa34.88■■■■□ 3.17
KCNMA1-224ENST00000618048 ABCC1P33527 1531 aa34.88■■■■□ 3.17
KCNMA1-224ENST00000618048 HSPA2P54652 639 aa34.88■■■■□ 3.17
KCNMA1-224ENST00000618048 MYT1LQ9UL68 1186 aa34.88■■■■□ 3.17
KCNMA1-224ENST00000618048 FBXO41Q8TF61 875 aa34.86■■■■□ 3.17
KCNMA1-224ENST00000618048 MLH3Q9UHC1 1453 aa34.84■■■■□ 3.17
KCNMA1-224ENST00000618048 REREQ9P2R6 1566 aa34.84■■■■□ 3.17
KCNMA1-224ENST00000618048 ITSN2Q9NZM3 1697 aa34.83■■■■□ 3.17
KCNMA1-224ENST00000618048 ABCA6Q8N139 1617 aa34.83■■■■□ 3.17
KCNMA1-224ENST00000618048 TRAPPC8Q9Y2L5 1435 aa34.81■■■■□ 3.16
KCNMA1-224ENST00000618048 CDC42BPAQ5VT25 1732 aa34.81■■■■□ 3.16
KCNMA1-224ENST00000618048 PREX1Q8TCU6 1659 aa34.76■■■■□ 3.16
KCNMA1-224ENST00000618048 CEBPAP49715 358 aaPredicted RBP34.73■■■■□ 3.15
KCNMA1-224ENST00000618048 AGLP35573 1532 aa34.72■■■■□ 3.15
KCNMA1-224ENST00000618048 KIDINS220Q9ULH0 1771 aa34.69■■■■□ 3.14
KCNMA1-224ENST00000618048 SAMD9LQ8IVG5 1584 aa34.68■■■■□ 3.14
KCNMA1-224ENST00000618048 GPATCH8Q9UKJ3 1502 aaKnown RBP34.67■■■■□ 3.14
KCNMA1-224ENST00000618048 ZNF777Q9ULD5 760 aaPredicted RBP34.66■■■■□ 3.14
KCNMA1-224ENST00000618048 SYCP2Q9BX26 1530 aa34.65■■■■□ 3.14
KCNMA1-224ENST00000618048 UHRF1BP1Q6BDS2 1440 aa34.63■■■■□ 3.13
KCNMA1-224ENST00000618048 C3P01024 1663 aa34.6■■■■□ 3.13
KCNMA1-224ENST00000618048 ESF1Q9H501 851 aaKnown RBP34.6■■■■□ 3.13
KCNMA1-224ENST00000618048 MTUS2Q5JR59 1369 aa34.58■■■■□ 3.13
KCNMA1-224ENST00000618048 CCNB3Q8WWL7 1395 aa34.57■■■■□ 3.12
KCNMA1-224ENST00000618048 PLEKHH2Q8IVE3 1493 aa34.56■■■■□ 3.12
KCNMA1-224ENST00000618048 SPAG9O60271 1321 aaKnown RBP34.55■■■■□ 3.12
KCNMA1-224ENST00000618048 CFDP1Q9UEE9 299 aaPredicted RBP34.55■■■■□ 3.12
KCNMA1-224ENST00000618048 KIAA1107Q9UPP5 1409 aa34.55■■■■□ 3.12
KCNMA1-224ENST00000618048 SETD1BQ9UPS6 1966 aaKnown RBP34.54■■■■□ 3.12
KCNMA1-224ENST00000618048 CNTLNQ9NXG0 1405 aa34.54■■■■□ 3.12
KCNMA1-224ENST00000618048 HNRNPMP52272 730 aaKnown RBP eCLIP34.53■■■■□ 3.12
KCNMA1-224ENST00000618048 ATP7AQ04656 1500 aa34.52■■■■□ 3.12
KCNMA1-224ENST00000618048 INO80Q9ULG1 1556 aaPredicted RBP34.49■■■■□ 3.11
KCNMA1-224ENST00000618048 STRCQ7RTU9 1775 aa34.49■■■■□ 3.11
KCNMA1-224ENST00000618048 CERKQ8TCT0 537 aa34.48■■■■□ 3.11
KCNMA1-224ENST00000618048 EHBP1L1Q8N3D4 1523 aa34.47■■■■□ 3.11
KCNMA1-224ENST00000618048 TIAM1Q13009 1591 aa34.45■■■■□ 3.11
KCNMA1-224ENST00000618048 DMRT2Q9Y5R5 561 aa34.45■■■■□ 3.11
KCNMA1-224ENST00000618048 SUPT6HQ7KZ85 1726 aaKnown RBP34.44■■■■□ 3.1
KCNMA1-224ENST00000618048 CEP162Q5TB80 1403 aa34.44■■■■□ 3.1
KCNMA1-224ENST00000618048 MROH2AA6NES4 1674 aa34.44■■■■□ 3.1
KCNMA1-224ENST00000618048 PLXNC1O60486 1568 aa34.43■■■■□ 3.1
KCNMA1-224ENST00000618048 A2MP01023 1474 aa34.4■■■■□ 3.1
KCNMA1-224ENST00000618048 NPATQ14207 1427 aa34.37■■■■□ 3.09
KCNMA1-224ENST00000618048 ZMYM3Q14202 1370 aa34.34■■■■□ 3.09
KCNMA1-224ENST00000618048 ZNF644Q9H582 1327 aaPredicted RBP34.33■■■■□ 3.09
KCNMA1-224ENST00000618048 PTPRTO14522 1441 aa34.33■■■■□ 3.09
KCNMA1-224ENST00000618048 ADGBQ8N7X0 1667 aa34.33■■■■□ 3.09
KCNMA1-224ENST00000618048 CLTCQ00610 1675 aaKnown RBP34.31■■■■□ 3.08
KCNMA1-224ENST00000618048 MBD5Q9P267 1494 aa34.31■■■■□ 3.08
KCNMA1-224ENST00000618048 NCOA1Q15788 1441 aa34.28■■■■□ 3.08
KCNMA1-224ENST00000618048 GGT6Q6P531 493 aa34.25■■■■□ 3.07
KCNMA1-224ENST00000618048 RTEL1-TNFRSF6BF6WH68 1400 aa34.24■■■■□ 3.07
KCNMA1-224ENST00000618048 NCOA2Q15596 1464 aa34.23■■■■□ 3.07
KCNMA1-224ENST00000618048 CAMSAP1Q5T5Y3 1602 aa34.22■■■■□ 3.07
KCNMA1-224ENST00000618048 MYO3AQ8NEV4 1616 aa34.2■■■■□ 3.07
KCNMA1-224ENST00000618048 PTPRKQ15262 1439 aa34.19■■■■□ 3.06
KCNMA1-224ENST00000618048 CAMSAP2Q08AD1 1489 aa34.19■■■■□ 3.06
KCNMA1-224ENST00000618048 CCDC141Q6ZP82 1450 aa34.19■■■■□ 3.06
KCNMA1-224ENST00000618048 ZNF142P52746 1687 aaPredicted RBP34.19■■■■□ 3.06
KCNMA1-224ENST00000618048 PPP6R1Q9UPN7 881 aa34.18■■■■□ 3.06
KCNMA1-224ENST00000618048 DHX29Q7Z478 1369 aaKnown RBP34.15■■■■□ 3.06
KCNMA1-224ENST00000618048 CEP170BQ9Y4F5 1589 aaPredicted RBP34.14■■■■□ 3.06
KCNMA1-224ENST00000618048 LTBP4Q8N2S1 1624 aa34.12■■■■□ 3.05
KCNMA1-224ENST00000618048 VPS8Q8N3P4 1428 aa34.1■■■■□ 3.05
KCNMA1-224ENST00000618048 PLA2R1Q13018 1463 aa34.09■■■■□ 3.05
KCNMA1-224ENST00000618048 RSPH4AQ5TD94 716 aa34.08■■■■□ 3.05
KCNMA1-224ENST00000618048 ARHGEF5Q12774 1597 aa34.06■■■■□ 3.04
KCNMA1-224ENST00000618048 NCKAP5LQ9HCH0 1330 aa34.04■■■■□ 3.04
KCNMA1-224ENST00000618048 LRRC9Q6ZRR7 1453 aa34.04■■■■□ 3.04
KCNMA1-224ENST00000618048 KIF3BO15066 747 aa34.04■■■■□ 3.04
KCNMA1-224ENST00000618048 FAM135AQ9P2D6 1515 aa34.04■■■■□ 3.04
KCNMA1-224ENST00000618048 IQSEC2Q5JU85 1478 aa34.03■■■■□ 3.04
KCNMA1-224ENST00000618048 KDM5DQ9BY66 1539 aa34.03■■■■□ 3.04
KCNMA1-224ENST00000618048 TCOF1Q13428 1488 aaKnown RBP34.01■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms