RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 CDC42BPBQ9Y5S2 1711 aa36.14■■■■□ 3.38
ARHGEF1-223ENST00000617585 POGZQ7Z3K3 1410 aa36.13■■■■□ 3.37
ARHGEF1-223ENST00000617585 ADAMTSL3P82987 1691 aa36.11■■■■□ 3.37
ARHGEF1-223ENST00000617585 CEP162Q5TB80 1403 aa36.09■■■■□ 3.37
ARHGEF1-223ENST00000617585 ARHGAP5Q13017 1502 aa36.08■■■■□ 3.37
ARHGEF1-223ENST00000617585 PREX2Q70Z35 1606 aa36.08■■■■□ 3.37
ARHGEF1-223ENST00000617585 BCORL1Q5H9F3 1711 aa36.08■■■■□ 3.37
ARHGEF1-223ENST00000617585 ZFYVE16Q7Z3T8 1539 aa36.06■■■■□ 3.36
ARHGEF1-223ENST00000617585 CDC42BPAQ5VT25 1732 aa36.03■■■■□ 3.36
ARHGEF1-223ENST00000617585 YEATS2Q9ULM3 1422 aa36.01■■■■□ 3.36
ARHGEF1-223ENST00000617585 ZNF518AQ6AHZ1 1483 aa35.99■■■■□ 3.35
ARHGEF1-223ENST00000617585 KDM5CP41229 1560 aa35.98■■■■□ 3.35
ARHGEF1-223ENST00000617585 SIGLEC1Q9BZZ2 1709 aa35.95■■■■□ 3.35
ARHGEF1-223ENST00000617585 ABCC1P33527 1531 aa35.93■■■■□ 3.34
ARHGEF1-223ENST00000617585 ARID4BQ4LE39 1312 aaPredicted RBP35.91■■■■□ 3.34
ARHGEF1-223ENST00000617585 PTPRMP28827 1452 aa35.91■■■■□ 3.34
ARHGEF1-223ENST00000617585 MADDQ8WXG6 1647 aa35.9■■■■□ 3.34
ARHGEF1-223ENST00000617585 GPATCH8Q9UKJ3 1502 aaKnown RBP35.89■■■■□ 3.34
ARHGEF1-223ENST00000617585 ITSN2Q9NZM3 1697 aa35.89■■■■□ 3.34
ARHGEF1-223ENST00000617585 ATP10AO60312 1499 aa35.89■■■■□ 3.34
ARHGEF1-223ENST00000617585 ARHGEF12Q9NZN5 1544 aa35.88■■■■□ 3.33
ARHGEF1-223ENST00000617585 AFAP1Q8N556 730 aa35.87■■■■□ 3.33
ARHGEF1-223ENST00000617585 LOC105371045A0A1W2PR82 267 aa35.86■■■■□ 3.33
ARHGEF1-223ENST00000617585 HECW2Q9P2P5 1572 aa35.85■■■■□ 3.33
ARHGEF1-223ENST00000617585 C9orf84Q5VXU9 1444 aa35.84■■■■□ 3.33
ARHGEF1-223ENST00000617585 MTUS2Q5JR59 1369 aa35.84■■■■□ 3.33
ARHGEF1-223ENST00000617585 MLH3Q9UHC1 1453 aa35.84■■■■□ 3.33
ARHGEF1-223ENST00000617585 EHBP1L1Q8N3D4 1523 aa35.82■■■■□ 3.32
ARHGEF1-223ENST00000617585 TRAPPC8Q9Y2L5 1435 aa35.81■■■■□ 3.32
ARHGEF1-223ENST00000617585 SAMD9LQ8IVG5 1584 aa35.81■■■■□ 3.32
ARHGEF1-223ENST00000617585 REREQ9P2R6 1566 aa35.79■■■■□ 3.32
ARHGEF1-223ENST00000617585 RIMS1Q86UR5 1692 aaKnown RBP35.78■■■■□ 3.32
ARHGEF1-223ENST00000617585 DIP2CQ9Y2E4 1556 aa35.77■■■■□ 3.32
ARHGEF1-223ENST00000617585 CCNB3Q8WWL7 1395 aa35.75■■■■□ 3.31
ARHGEF1-223ENST00000617585 ABCA6Q8N139 1617 aa35.73■■■■□ 3.31
ARHGEF1-223ENST00000617585 VPS8Q8N3P4 1428 aa35.73■■■■□ 3.31
ARHGEF1-223ENST00000617585 KIAA1107Q9UPP5 1409 aa35.73■■■■□ 3.31
ARHGEF1-223ENST00000617585 KIDINS220Q9ULH0 1771 aa35.72■■■■□ 3.31
ARHGEF1-223ENST00000617585 TIAM1Q13009 1591 aa35.72■■■■□ 3.31
ARHGEF1-223ENST00000617585 PLEKHH2Q8IVE3 1493 aa35.71■■■■□ 3.31
ARHGEF1-223ENST00000617585 FER1L4A9Z1Z3 1794 aa35.69■■■■□ 3.3
ARHGEF1-223ENST00000617585 SYCP2Q9BX26 1530 aa35.69■■■■□ 3.3
ARHGEF1-223ENST00000617585 CFDP1Q9UEE9 299 aaPredicted RBP35.69■■■■□ 3.3
ARHGEF1-223ENST00000617585 ZNF777Q9ULD5 760 aaPredicted RBP35.66■■■■□ 3.3
ARHGEF1-223ENST00000617585 AGLP35573 1532 aa35.64■■■■□ 3.3
ARHGEF1-223ENST00000617585 SUPT6HQ7KZ85 1726 aaKnown RBP35.63■■■■□ 3.29
ARHGEF1-223ENST00000617585 MYT1LQ9UL68 1186 aa35.61■■■■□ 3.29
ARHGEF1-223ENST00000617585 HNRNPMP52272 730 aaKnown RBP eCLIP35.6■■■■□ 3.29
ARHGEF1-223ENST00000617585 MLECQ14165 292 aa35.6■■■■□ 3.29
ARHGEF1-223ENST00000617585 MAP3K1Q13233 1512 aa35.59■■■■□ 3.29
ARHGEF1-223ENST00000617585 NCOA2Q15596 1464 aa35.57■■■■□ 3.28
ARHGEF1-223ENST00000617585 INO80Q9ULG1 1556 aaPredicted RBP35.55■■■■□ 3.28
ARHGEF1-223ENST00000617585 SPAG9O60271 1321 aaKnown RBP35.54■■■■□ 3.28
ARHGEF1-223ENST00000617585 LRRC9Q6ZRR7 1453 aa35.53■■■■□ 3.28
ARHGEF1-223ENST00000617585 MBD5Q9P267 1494 aa35.53■■■■□ 3.28
ARHGEF1-223ENST00000617585 ATP7AQ04656 1500 aa35.52■■■■□ 3.28
ARHGEF1-223ENST00000617585 LMTK3Q96Q04 1460 aa35.52■■■■□ 3.28
ARHGEF1-223ENST00000617585 ZNF644Q9H582 1327 aaPredicted RBP35.49■■■■□ 3.27
ARHGEF1-223ENST00000617585 PLXNC1O60486 1568 aa35.43■■■■□ 3.26
ARHGEF1-223ENST00000617585 RTEL1-TNFRSF6BF6WH68 1400 aa35.4■■■■□ 3.26
ARHGEF1-223ENST00000617585 ADGBQ8N7X0 1667 aa35.4■■■■□ 3.26
ARHGEF1-223ENST00000617585 CAMSAP2Q08AD1 1489 aa35.39■■■■□ 3.26
ARHGEF1-223ENST00000617585 SETD1BQ9UPS6 1966 aaKnown RBP35.38■■■■□ 3.25
ARHGEF1-223ENST00000617585 A2MP01023 1474 aa35.37■■■■□ 3.25
ARHGEF1-223ENST00000617585 KANK4Q5T7N3 995 aaPredicted RBP35.36■■■■□ 3.25
ARHGEF1-223ENST00000617585 RSPH4AQ5TD94 716 aa35.36■■■■□ 3.25
ARHGEF1-223ENST00000617585 C3P01024 1663 aa35.35■■■■□ 3.25
ARHGEF1-223ENST00000617585 PREX1Q8TCU6 1659 aa35.34■■■■□ 3.25
ARHGEF1-223ENST00000617585 CCDC141Q6ZP82 1450 aa35.34■■■■□ 3.25
ARHGEF1-223ENST00000617585 CNTLNQ9NXG0 1405 aa35.33■■■■□ 3.25
ARHGEF1-223ENST00000617585 ARHGEF5Q12774 1597 aa35.33■■■■□ 3.25
ARHGEF1-223ENST00000617585 CEBPAP49715 358 aaPredicted RBP35.32■■■■□ 3.24
ARHGEF1-223ENST00000617585 PLPPR3Q6T4P5 718 aa35.32■■■■□ 3.24
ARHGEF1-223ENST00000617585 MROH2AA6NES4 1674 aa35.3■■■■□ 3.24
ARHGEF1-223ENST00000617585 MIA2Q96PC5 1412 aa35.26■■■■□ 3.24
ARHGEF1-223ENST00000617585 ESF1Q9H501 851 aaKnown RBP35.25■■■■□ 3.23
ARHGEF1-223ENST00000617585 MYOM3Q5VTT5 1437 aa35.24■■■■□ 3.23
ARHGEF1-223ENST00000617585 DHX29Q7Z478 1369 aaKnown RBP35.23■■■■□ 3.23
ARHGEF1-223ENST00000617585 HSPA2P54652 639 aa35.2■■■■□ 3.23
ARHGEF1-223ENST00000617585 PPP6R1Q9UPN7 881 aa35.2■■■■□ 3.23
ARHGEF1-223ENST00000617585 MAST1Q9Y2H9 1570 aa35.17■■■■□ 3.22
ARHGEF1-223ENST00000617585 APLP2Q06481 763 aa35.16■■■■□ 3.22
ARHGEF1-223ENST00000617585 CLTCQ00610 1675 aaKnown RBP35.16■■■■□ 3.22
ARHGEF1-223ENST00000617585 UHRF1BP1Q6BDS2 1440 aa35.15■■■■□ 3.22
ARHGEF1-223ENST00000617585 ZMYM3Q14202 1370 aa35.14■■■■□ 3.22
ARHGEF1-223ENST00000617585 TSPY4P0CV99 314 aa35.13■■■■□ 3.21
ARHGEF1-223ENST00000617585 TSPY10P0CW01 314 aa35.13■■■■□ 3.21
ARHGEF1-223ENST00000617585 NPATQ14207 1427 aa35.13■■■■□ 3.21
ARHGEF1-223ENST00000617585 GGT6Q6P531 493 aa35.1■■■■□ 3.21
ARHGEF1-223ENST00000617585 FAM135AQ9P2D6 1515 aa35.06■■■■□ 3.2
ARHGEF1-223ENST00000617585 STRCQ7RTU9 1775 aa35.05■■■■□ 3.2
ARHGEF1-223ENST00000617585 PTPN23Q9H3S7 1636 aa35.03■■■■□ 3.2
ARHGEF1-223ENST00000617585 PTPRKQ15262 1439 aa35■■■■□ 3.19
ARHGEF1-223ENST00000617585 KIF3BO15066 747 aa35■■■■□ 3.19
ARHGEF1-223ENST00000617585 ILDR1Q86SU0 546 aaPredicted RBP34.99■■■■□ 3.19
ARHGEF1-223ENST00000617585 TCOF1Q13428 1488 aaKnown RBP34.98■■■■□ 3.19
ARHGEF1-223ENST00000617585 CROCC2H7BZ55 1655 aa34.97■■■■□ 3.19
ARHGEF1-223ENST00000617585 FGD6Q6ZV73 1430 aa34.97■■■■□ 3.19
ARHGEF1-223ENST00000617585 SHANK2Q9UPX8 1470 aa34.96■■■■□ 3.19
ARHGEF1-223ENST00000617585 EIF2AK4Q9P2K8 1649 aaKnown RBP34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms