RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 GCC2Q8IWJ2 1684 aa16.42■□□□□ 0.22
C11orf54-215ENST00000617482 C11orf95C9JLR9 678 aaPredicted RBP16.4■□□□□ 0.22
C11orf54-215ENST00000617482 DAPK1P53355 1430 aa16.39■□□□□ 0.21
C11orf54-215ENST00000617482 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
C11orf54-215ENST00000617482 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
C11orf54-215ENST00000617482 NBPF8Q3BBV2 869 aa16.38■□□□□ 0.21
C11orf54-215ENST00000617482 ABCC5O15440 1437 aa16.38■□□□□ 0.21
C11orf54-215ENST00000617482 CCDC184Q52MB2 194 aa16.37■□□□□ 0.21
C11orf54-215ENST00000617482 ANKRD30BQ9BXX2 1392 aa16.37■□□□□ 0.21
C11orf54-215ENST00000617482 FBLN2P98095 1184 aa16.36■□□□□ 0.21
C11orf54-215ENST00000617482 CDK11AQ9UQ88 783 aaPredicted RBP16.36■□□□□ 0.21
C11orf54-215ENST00000617482 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
C11orf54-215ENST00000617482 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
C11orf54-215ENST00000617482 ROCK1Q13464 1354 aa16.35■□□□□ 0.21
C11orf54-215ENST00000617482 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
C11orf54-215ENST00000617482 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
C11orf54-215ENST00000617482 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
C11orf54-215ENST00000617482 KIAA0556O60303 1618 aa16.33■□□□□ 0.21
C11orf54-215ENST00000617482 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
C11orf54-215ENST00000617482 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.2
C11orf54-215ENST00000617482 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
C11orf54-215ENST00000617482 CCDC7Q96M83 1385 aa16.32■□□□□ 0.2
C11orf54-215ENST00000617482 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
C11orf54-215ENST00000617482 CFDP1Q9UEE9 299 aaPredicted RBP16.32■□□□□ 0.2
C11orf54-215ENST00000617482 RPRD2Q5VT52 1461 aaKnown RBP16.32■□□□□ 0.2
C11orf54-215ENST00000617482 PRG4Q92954 1404 aaPredicted RBP16.31■□□□□ 0.2
C11orf54-215ENST00000617482 FAM9BQ8IZU0 186 aa16.31■□□□□ 0.2
C11orf54-215ENST00000617482 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
C11orf54-215ENST00000617482 NCOA1Q15788 1441 aa16.3■□□□□ 0.2
C11orf54-215ENST00000617482 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
C11orf54-215ENST00000617482 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
C11orf54-215ENST00000617482 DNMT1P26358 1616 aaKnown RBP16.28■□□□□ 0.2
C11orf54-215ENST00000617482 MRS2Q9HD23 443 aa16.28■□□□□ 0.2
C11orf54-215ENST00000617482 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.2
C11orf54-215ENST00000617482 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.19
C11orf54-215ENST00000617482 KIF7Q2M1P5 1343 aa16.27■□□□□ 0.19
C11orf54-215ENST00000617482 ZNF326Q5BKZ1 582 aaKnown RBP16.26■□□□□ 0.19
C11orf54-215ENST00000617482 ANP32EQ9BTT0 268 aa16.26■□□□□ 0.19
C11orf54-215ENST00000617482 PLB1Q6P1J6 1458 aa16.25■□□□□ 0.19
C11orf54-215ENST00000617482 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
C11orf54-215ENST00000617482 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
C11orf54-215ENST00000617482 TROQ12816 1431 aaPredicted RBP16.24■□□□□ 0.19
C11orf54-215ENST00000617482 SPATA31E1Q6ZUB1 1445 aa16.23■□□□□ 0.19
C11orf54-215ENST00000617482 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
C11orf54-215ENST00000617482 DAXXQ9UER7 740 aaPredicted RBP16.23■□□□□ 0.19
C11orf54-215ENST00000617482 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
C11orf54-215ENST00000617482 PZPP20742 1482 aa16.22■□□□□ 0.19
C11orf54-215ENST00000617482 PKD2Q13563 968 aa16.22■□□□□ 0.19
C11orf54-215ENST00000617482 GPATCH8Q9UKJ3 1502 aaKnown RBP16.21■□□□□ 0.19
C11orf54-215ENST00000617482 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
C11orf54-215ENST00000617482 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
C11orf54-215ENST00000617482 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
C11orf54-215ENST00000617482 KIF14Q15058 1648 aa16.18■□□□□ 0.18
C11orf54-215ENST00000617482 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
C11orf54-215ENST00000617482 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
C11orf54-215ENST00000617482 ANKRD30AQ9BXX3 1397 aa16.16■□□□□ 0.18
C11orf54-215ENST00000617482 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
C11orf54-215ENST00000617482 CARMIL2Q6F5E8 1435 aa16.15■□□□□ 0.18
C11orf54-215ENST00000617482 USP47Q96K76 1375 aa16.14■□□□□ 0.17
C11orf54-215ENST00000617482 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
C11orf54-215ENST00000617482 PPP4R2Q9NY27 417 aa16.13■□□□□ 0.17
C11orf54-215ENST00000617482 NUP155O75694 1391 aa16.12■□□□□ 0.17
C11orf54-215ENST00000617482 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
C11orf54-215ENST00000617482 ITSN2Q9NZM3 1697 aa16.1■□□□□ 0.17
C11orf54-215ENST00000617482 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
C11orf54-215ENST00000617482 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
C11orf54-215ENST00000617482 TSPY4P0CV99 314 aa16.1■□□□□ 0.17
C11orf54-215ENST00000617482 TSPY10P0CW01 314 aa16.1■□□□□ 0.17
C11orf54-215ENST00000617482 DHX29Q7Z478 1369 aaKnown RBP16.1■□□□□ 0.17
C11orf54-215ENST00000617482 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
C11orf54-215ENST00000617482 SENP3-EIF4A1A0A087X0R7 540 aa16.09■□□□□ 0.17
C11orf54-215ENST00000617482 HNRNPMP52272 730 aaKnown RBP eCLIP16.09■□□□□ 0.17
C11orf54-215ENST00000617482 NUP160Q12769 1436 aa16.09■□□□□ 0.17
C11orf54-215ENST00000617482 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
C11orf54-215ENST00000617482 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.17
C11orf54-215ENST00000617482 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.16
C11orf54-215ENST00000617482 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
C11orf54-215ENST00000617482 MSH5O43196 834 aa16.06■□□□□ 0.16
C11orf54-215ENST00000617482 ATP10BO94823 1461 aa16.06■□□□□ 0.16
C11orf54-215ENST00000617482 ADCY10Q96PN6 1610 aa16.06■□□□□ 0.16
C11orf54-215ENST00000617482 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
C11orf54-215ENST00000617482 DCAF11Q8TEB1 546 aa16.05■□□□□ 0.16
C11orf54-215ENST00000617482 CROCC2H7BZ55 1655 aa16.04■□□□□ 0.16
C11orf54-215ENST00000617482 POLR1AO95602 1720 aaPredicted RBP16.03■□□□□ 0.16
C11orf54-215ENST00000617482 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
C11orf54-215ENST00000617482 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
C11orf54-215ENST00000617482 ARID4BQ4LE39 1312 aaPredicted RBP16.02■□□□□ 0.16
C11orf54-215ENST00000617482 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
C11orf54-215ENST00000617482 CDC42BPAQ5VT25 1732 aa16.02■□□□□ 0.15
C11orf54-215ENST00000617482 TMC1Q8TDI8 760 aa16.02■□□□□ 0.15
C11orf54-215ENST00000617482 ABCA8O94911 1581 aa16.01■□□□□ 0.15
C11orf54-215ENST00000617482 KDM5CP41229 1560 aa16.01■□□□□ 0.15
C11orf54-215ENST00000617482 UHRF1BP1Q6BDS2 1440 aa16■□□□□ 0.15
C11orf54-215ENST00000617482 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
C11orf54-215ENST00000617482 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
C11orf54-215ENST00000617482 RALGAPBQ86X10 1494 aa15.98■□□□□ 0.15
C11orf54-215ENST00000617482 SHANK2Q9UPX8 1470 aa15.98■□□□□ 0.15
C11orf54-215ENST00000617482 NUDCQ9Y266 331 aa15.98■□□□□ 0.15
C11orf54-215ENST00000617482 SMG6Q86US8 1419 aaKnown RBP15.98■□□□□ 0.15
C11orf54-215ENST00000617482 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms