RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 TIAM1Q13009 1591 aa29.76■■■□□ 2.35
SUSD3-205ENST00000617293 CDC42BPAQ5VT25 1732 aa29.74■■■□□ 2.35
SUSD3-205ENST00000617293 SCAPERQ9BY12 1400 aa29.74■■■□□ 2.35
SUSD3-205ENST00000617293 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
SUSD3-205ENST00000617293 CCNB3Q8WWL7 1395 aa29.71■■■□□ 2.35
SUSD3-205ENST00000617293 FRMPD1Q5SYB0 1578 aa29.71■■■□□ 2.35
SUSD3-205ENST00000617293 RICTORQ6R327 1708 aa29.7■■■□□ 2.34
SUSD3-205ENST00000617293 GPATCH8Q9UKJ3 1502 aaKnown RBP29.7■■■□□ 2.34
SUSD3-205ENST00000617293 APLP2Q06481 763 aa29.69■■■□□ 2.34
SUSD3-205ENST00000617293 ZNF777Q9ULD5 760 aaPredicted RBP29.68■■■□□ 2.34
SUSD3-205ENST00000617293 MAP3K1Q13233 1512 aa29.66■■■□□ 2.34
SUSD3-205ENST00000617293 KANK4Q5T7N3 995 aaPredicted RBP29.65■■■□□ 2.34
SUSD3-205ENST00000617293 CFDP1Q9UEE9 299 aaPredicted RBP29.65■■■□□ 2.34
SUSD3-205ENST00000617293 LRRC9Q6ZRR7 1453 aa29.65■■■□□ 2.34
SUSD3-205ENST00000617293 POGZQ7Z3K3 1410 aa29.63■■■□□ 2.33
SUSD3-205ENST00000617293 SUPT6HQ7KZ85 1726 aaKnown RBP29.63■■■□□ 2.33
SUSD3-205ENST00000617293 NCOA2Q15596 1464 aa29.61■■■□□ 2.33
SUSD3-205ENST00000617293 AFAP1Q8N556 730 aa29.6■■■□□ 2.33
SUSD3-205ENST00000617293 ABCC1P33527 1531 aa29.57■■■□□ 2.32
SUSD3-205ENST00000617293 KDM4FA0A1W2PPD8 638 aa29.57■■■□□ 2.32
SUSD3-205ENST00000617293 ZMYM4Q5VZL5 1548 aa29.56■■■□□ 2.32
SUSD3-205ENST00000617293 ZNF518AQ6AHZ1 1483 aa29.56■■■□□ 2.32
SUSD3-205ENST00000617293 SAMD9LQ8IVG5 1584 aa29.56■■■□□ 2.32
SUSD3-205ENST00000617293 ARHGEF12Q9NZN5 1544 aa29.55■■■□□ 2.32
SUSD3-205ENST00000617293 MYT1LQ9UL68 1186 aa29.55■■■□□ 2.32
SUSD3-205ENST00000617293 ITSN2Q9NZM3 1697 aa29.55■■■□□ 2.32
SUSD3-205ENST00000617293 MAGI2Q86UL8 1455 aa29.53■■■□□ 2.32
SUSD3-205ENST00000617293 TRAPPC8Q9Y2L5 1435 aa29.53■■■□□ 2.32
SUSD3-205ENST00000617293 HNRNPMP52272 730 aaKnown RBP eCLIP29.52■■■□□ 2.32
SUSD3-205ENST00000617293 YEATS2Q9ULM3 1422 aa29.52■■■□□ 2.32
SUSD3-205ENST00000617293 ZFYVE16Q7Z3T8 1539 aa29.51■■■□□ 2.32
SUSD3-205ENST00000617293 ARHGEF40Q8TER5 1519 aa29.5■■■□□ 2.31
SUSD3-205ENST00000617293 ZNF644Q9H582 1327 aaPredicted RBP29.49■■■□□ 2.31
SUSD3-205ENST00000617293 SYCP2Q9BX26 1530 aa29.49■■■□□ 2.31
SUSD3-205ENST00000617293 PLEKHH2Q8IVE3 1493 aa29.48■■■□□ 2.31
SUSD3-205ENST00000617293 KDM5CP41229 1560 aa29.47■■■□□ 2.31
SUSD3-205ENST00000617293 ARID4BQ4LE39 1312 aaPredicted RBP29.47■■■□□ 2.31
SUSD3-205ENST00000617293 KIAA1107Q9UPP5 1409 aa29.45■■■□□ 2.31
SUSD3-205ENST00000617293 HECW2Q9P2P5 1572 aa29.42■■■□□ 2.3
SUSD3-205ENST00000617293 MLH3Q9UHC1 1453 aa29.41■■■□□ 2.3
SUSD3-205ENST00000617293 ATP10AO60312 1499 aa29.4■■■□□ 2.3
SUSD3-205ENST00000617293 SPAG9O60271 1321 aaKnown RBP29.38■■■□□ 2.29
SUSD3-205ENST00000617293 CAMSAP2Q08AD1 1489 aa29.36■■■□□ 2.29
SUSD3-205ENST00000617293 MYOM3Q5VTT5 1437 aa29.36■■■□□ 2.29
SUSD3-205ENST00000617293 C9orf84Q5VXU9 1444 aa29.35■■■□□ 2.29
SUSD3-205ENST00000617293 MBD5Q9P267 1494 aa29.35■■■□□ 2.29
SUSD3-205ENST00000617293 KIDINS220Q9ULH0 1771 aa29.34■■■□□ 2.29
SUSD3-205ENST00000617293 SIGLEC1Q9BZZ2 1709 aa29.32■■■□□ 2.28
SUSD3-205ENST00000617293 DIP2CQ9Y2E4 1556 aa29.32■■■□□ 2.28
SUSD3-205ENST00000617293 ABCA6Q8N139 1617 aa29.31■■■□□ 2.28
SUSD3-205ENST00000617293 MIA2Q96PC5 1412 aa29.31■■■□□ 2.28
SUSD3-205ENST00000617293 BCORL1Q5H9F3 1711 aa29.31■■■□□ 2.28
SUSD3-205ENST00000617293 MLECQ14165 292 aa29.29■■■□□ 2.28
SUSD3-205ENST00000617293 RSPH4AQ5TD94 716 aa29.29■■■□□ 2.28
SUSD3-205ENST00000617293 ATP7AQ04656 1500 aa29.26■■■□□ 2.27
SUSD3-205ENST00000617293 ADAMTSL3P82987 1691 aa29.26■■■□□ 2.27
SUSD3-205ENST00000617293 CCDC141Q6ZP82 1450 aa29.25■■■□□ 2.27
SUSD3-205ENST00000617293 INO80Q9ULG1 1556 aaPredicted RBP29.23■■■□□ 2.27
SUSD3-205ENST00000617293 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
SUSD3-205ENST00000617293 TSPY4P0CV99 314 aa29.22■■■□□ 2.27
SUSD3-205ENST00000617293 TSPY10P0CW01 314 aa29.22■■■□□ 2.27
SUSD3-205ENST00000617293 REREQ9P2R6 1566 aa29.22■■■□□ 2.27
SUSD3-205ENST00000617293 ARHGEF5Q12774 1597 aa29.21■■■□□ 2.27
SUSD3-205ENST00000617293 MADDQ8WXG6 1647 aa29.2■■■□□ 2.26
SUSD3-205ENST00000617293 PTPN23Q9H3S7 1636 aa29.19■■■□□ 2.26
SUSD3-205ENST00000617293 RTEL1-TNFRSF6BF6WH68 1400 aa29.19■■■□□ 2.26
SUSD3-205ENST00000617293 FGD6Q6ZV73 1430 aa29.19■■■□□ 2.26
SUSD3-205ENST00000617293 A2MP01023 1474 aa29.14■■■□□ 2.26
SUSD3-205ENST00000617293 AGLP35573 1532 aa29.14■■■□□ 2.25
SUSD3-205ENST00000617293 PTPRMP28827 1452 aa29.13■■■□□ 2.25
SUSD3-205ENST00000617293 RIMS1Q86UR5 1692 aaKnown RBP29.12■■■□□ 2.25
SUSD3-205ENST00000617293 ADGBQ8N7X0 1667 aa29.12■■■□□ 2.25
SUSD3-205ENST00000617293 FER1L4A9Z1Z3 1794 aa29.1■■■□□ 2.25
SUSD3-205ENST00000617293 TCOF1Q13428 1488 aaKnown RBP29.1■■■□□ 2.25
SUSD3-205ENST00000617293 PLPPR3Q6T4P5 718 aa29.09■■■□□ 2.25
SUSD3-205ENST00000617293 FAM50AQ14320 339 aaKnown RBP29.08■■■□□ 2.25
SUSD3-205ENST00000617293 PLXNC1O60486 1568 aa29.05■■■□□ 2.24
SUSD3-205ENST00000617293 ABCC5O15440 1437 aa29.05■■■□□ 2.24
SUSD3-205ENST00000617293 DHX29Q7Z478 1369 aaKnown RBP29.05■■■□□ 2.24
SUSD3-205ENST00000617293 MAST1Q9Y2H9 1570 aa29.05■■■□□ 2.24
SUSD3-205ENST00000617293 ESF1Q9H501 851 aaKnown RBP29.04■■■□□ 2.24
SUSD3-205ENST00000617293 GGT6Q6P531 493 aa29.02■■■□□ 2.24
SUSD3-205ENST00000617293 DAPK1P53355 1430 aa29.02■■■□□ 2.24
SUSD3-205ENST00000617293 DNMT1P26358 1616 aaKnown RBP29.01■■■□□ 2.23
SUSD3-205ENST00000617293 CROCC2H7BZ55 1655 aa28.99■■■□□ 2.23
SUSD3-205ENST00000617293 KIF3BO15066 747 aa28.98■■■□□ 2.23
SUSD3-205ENST00000617293 CHIC2Q9UKJ5 165 aa28.97■■■□□ 2.23
SUSD3-205ENST00000617293 SHANK2Q9UPX8 1470 aa28.97■■■□□ 2.23
SUSD3-205ENST00000617293 CEBPAP49715 358 aaPredicted RBP28.96■■■□□ 2.23
SUSD3-205ENST00000617293 RRP7BPQ9NSQ0 103 aa28.94■■■□□ 2.22
SUSD3-205ENST00000617293 CNTLNQ9NXG0 1405 aa28.9■■■□□ 2.22
SUSD3-205ENST00000617293 KIF15Q9NS87 1388 aa28.89■■■□□ 2.22
SUSD3-205ENST00000617293 PPP6R1Q9UPN7 881 aa28.89■■■□□ 2.22
SUSD3-205ENST00000617293 ANKRD30AQ9BXX3 1397 aa28.88■■■□□ 2.21
SUSD3-205ENST00000617293 DUOX2Q9NRD8 1548 aa28.87■■■□□ 2.21
SUSD3-205ENST00000617293 C3P01024 1663 aa28.85■■■□□ 2.21
SUSD3-205ENST00000617293 CLTCQ00610 1675 aaKnown RBP28.85■■■□□ 2.21
SUSD3-205ENST00000617293 ITGAEP38570 1179 aa28.84■■■□□ 2.21
SUSD3-205ENST00000617293 ZMYM3Q14202 1370 aa28.83■■■□□ 2.21
SUSD3-205ENST00000617293 NCOA1Q15788 1441 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms