RNA–Protein interactions for RNA: ENST00000617138.4

MDK-213, Transcript of midkine, humanhuman

TSL 2 BASIC

Gene MDK, Length 635 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-213ENST00000617138 ARHGEF40Q8TER5 1519 aa33.62■■■□□ 2.97
MDK-213ENST00000617138 ARHGAP5Q13017 1502 aa33.6■■■□□ 2.97
MDK-213ENST00000617138 LRRIQ1Q96JM4 1722 aa33.59■■■□□ 2.97
MDK-213ENST00000617138 ZFYVE16Q7Z3T8 1539 aa33.56■■■□□ 2.96
MDK-213ENST00000617138 CEP162Q5TB80 1403 aa33.53■■■□□ 2.96
MDK-213ENST00000617138 ZNF518AQ6AHZ1 1483 aa33.53■■■□□ 2.96
MDK-213ENST00000617138 YEATS2Q9ULM3 1422 aa33.49■■■□□ 2.95
MDK-213ENST00000617138 ADAMTSL3P82987 1691 aa33.48■■■□□ 2.95
MDK-213ENST00000617138 BCORL1Q5H9F3 1711 aa33.45■■■□□ 2.95
MDK-213ENST00000617138 PTPRMP28827 1452 aa33.45■■■□□ 2.95
MDK-213ENST00000617138 MTUS2Q5JR59 1369 aa33.44■■■□□ 2.94
MDK-213ENST00000617138 ATP10AO60312 1499 aa33.44■■■□□ 2.94
MDK-213ENST00000617138 AFAP1Q8N556 730 aa33.43■■■□□ 2.94
MDK-213ENST00000617138 PREX2Q70Z35 1606 aa33.42■■■□□ 2.94
MDK-213ENST00000617138 C9orf84Q5VXU9 1444 aa33.4■■■□□ 2.94
MDK-213ENST00000617138 MYT1LQ9UL68 1186 aa33.4■■■□□ 2.94
MDK-213ENST00000617138 KDM5CP41229 1560 aa33.38■■■□□ 2.93
MDK-213ENST00000617138 CDC42BPBQ9Y5S2 1711 aa33.38■■■□□ 2.93
MDK-213ENST00000617138 CCNB3Q8WWL7 1395 aa33.35■■■□□ 2.93
MDK-213ENST00000617138 GPATCH8Q9UKJ3 1502 aaKnown RBP33.35■■■□□ 2.93
MDK-213ENST00000617138 MLH3Q9UHC1 1453 aa33.35■■■□□ 2.93
MDK-213ENST00000617138 HECW2Q9P2P5 1572 aa33.34■■■□□ 2.93
MDK-213ENST00000617138 ABCC1P33527 1531 aa33.34■■■□□ 2.93
MDK-213ENST00000617138 CFDP1Q9UEE9 299 aaPredicted RBP33.33■■■□□ 2.93
MDK-213ENST00000617138 MADDQ8WXG6 1647 aa33.32■■■□□ 2.92
MDK-213ENST00000617138 ZNF777Q9ULD5 760 aaPredicted RBP33.31■■■□□ 2.92
MDK-213ENST00000617138 LOC105371045A0A1W2PR82 267 aa33.3■■■□□ 2.92
MDK-213ENST00000617138 TRAPPC8Q9Y2L5 1435 aa33.29■■■□□ 2.92
MDK-213ENST00000617138 PLEKHH2Q8IVE3 1493 aa33.29■■■□□ 2.92
MDK-213ENST00000617138 CDC42BPAQ5VT25 1732 aa33.28■■■□□ 2.92
MDK-213ENST00000617138 MLECQ14165 292 aa33.28■■■□□ 2.92
MDK-213ENST00000617138 ARHGEF12Q9NZN5 1544 aa33.28■■■□□ 2.92
MDK-213ENST00000617138 EHBP1L1Q8N3D4 1523 aa33.27■■■□□ 2.92
MDK-213ENST00000617138 KIAA1107Q9UPP5 1409 aa33.27■■■□□ 2.92
MDK-213ENST00000617138 REREQ9P2R6 1566 aa33.22■■■□□ 2.91
MDK-213ENST00000617138 ITSN2Q9NZM3 1697 aa33.21■■■□□ 2.91
MDK-213ENST00000617138 VPS8Q8N3P4 1428 aa33.2■■■□□ 2.91
MDK-213ENST00000617138 DIP2CQ9Y2E4 1556 aa33.19■■■□□ 2.9
MDK-213ENST00000617138 RIMS1Q86UR5 1692 aaKnown RBP33.18■■■□□ 2.9
MDK-213ENST00000617138 SPAG9O60271 1321 aaKnown RBP33.18■■■□□ 2.9
MDK-213ENST00000617138 SAMD9LQ8IVG5 1584 aa33.17■■■□□ 2.9
MDK-213ENST00000617138 SIGLEC1Q9BZZ2 1709 aa33.17■■■□□ 2.9
MDK-213ENST00000617138 HNRNPMP52272 730 aaKnown RBP eCLIP33.17■■■□□ 2.9
MDK-213ENST00000617138 SYCP2Q9BX26 1530 aa33.15■■■□□ 2.9
MDK-213ENST00000617138 AGLP35573 1532 aa33.13■■■□□ 2.89
MDK-213ENST00000617138 ABCA6Q8N139 1617 aa33.11■■■□□ 2.89
MDK-213ENST00000617138 ESF1Q9H501 851 aaKnown RBP33.1■■■□□ 2.89
MDK-213ENST00000617138 TIAM1Q13009 1591 aa33.09■■■□□ 2.89
MDK-213ENST00000617138 FER1L4A9Z1Z3 1794 aa33.08■■■□□ 2.89
MDK-213ENST00000617138 PLPPR3Q6T4P5 718 aa33.07■■■□□ 2.88
MDK-213ENST00000617138 KIDINS220Q9ULH0 1771 aa33.06■■■□□ 2.88
MDK-213ENST00000617138 NCOA2Q15596 1464 aa33.05■■■□□ 2.88
MDK-213ENST00000617138 LMTK3Q96Q04 1460 aa33.05■■■□□ 2.88
MDK-213ENST00000617138 RSPH4AQ5TD94 716 aa33.04■■■□□ 2.88
MDK-213ENST00000617138 MAP3K1Q13233 1512 aa33.02■■■□□ 2.88
MDK-213ENST00000617138 SUPT6HQ7KZ85 1726 aaKnown RBP33.02■■■□□ 2.88
MDK-213ENST00000617138 ZNF644Q9H582 1327 aaPredicted RBP33.02■■■□□ 2.88
MDK-213ENST00000617138 ATP7AQ04656 1500 aa33.01■■■□□ 2.87
MDK-213ENST00000617138 LRRC9Q6ZRR7 1453 aa32.99■■■□□ 2.87
MDK-213ENST00000617138 CNTLNQ9NXG0 1405 aa32.99■■■□□ 2.87
MDK-213ENST00000617138 MBD5Q9P267 1494 aa32.99■■■□□ 2.87
MDK-213ENST00000617138 RTEL1-TNFRSF6BF6WH68 1400 aa32.96■■■□□ 2.87
MDK-213ENST00000617138 APLP2Q06481 763 aa32.95■■■□□ 2.87
MDK-213ENST00000617138 CEBPAP49715 358 aaPredicted RBP32.94■■■□□ 2.86
MDK-213ENST00000617138 INO80Q9ULG1 1556 aaPredicted RBP32.94■■■□□ 2.86
MDK-213ENST00000617138 A2MP01023 1474 aa32.93■■■□□ 2.86
MDK-213ENST00000617138 PPP6R1Q9UPN7 881 aa32.9■■■□□ 2.86
MDK-213ENST00000617138 CCDC141Q6ZP82 1450 aa32.89■■■□□ 2.86
MDK-213ENST00000617138 CAMSAP2Q08AD1 1489 aa32.88■■■□□ 2.85
MDK-213ENST00000617138 HSPA2P54652 639 aa32.87■■■□□ 2.85
MDK-213ENST00000617138 TSPY4P0CV99 314 aa32.86■■■□□ 2.85
MDK-213ENST00000617138 TSPY10P0CW01 314 aa32.86■■■□□ 2.85
MDK-213ENST00000617138 PLXNC1O60486 1568 aa32.86■■■□□ 2.85
MDK-213ENST00000617138 KANK4Q5T7N3 995 aaPredicted RBP32.85■■■□□ 2.85
MDK-213ENST00000617138 UHRF1BP1Q6BDS2 1440 aa32.85■■■□□ 2.85
MDK-213ENST00000617138 MIA2Q96PC5 1412 aa32.82■■■□□ 2.84
MDK-213ENST00000617138 DHX29Q7Z478 1369 aaKnown RBP32.82■■■□□ 2.84
MDK-213ENST00000617138 ADGBQ8N7X0 1667 aa32.79■■■□□ 2.84
MDK-213ENST00000617138 PREX1Q8TCU6 1659 aa32.79■■■□□ 2.84
MDK-213ENST00000617138 GGT6Q6P531 493 aa32.79■■■□□ 2.84
MDK-213ENST00000617138 SETD1BQ9UPS6 1966 aaKnown RBP32.79■■■□□ 2.84
MDK-213ENST00000617138 MYOM3Q5VTT5 1437 aa32.77■■■□□ 2.84
MDK-213ENST00000617138 ZMYM3Q14202 1370 aa32.77■■■□□ 2.84
MDK-213ENST00000617138 ARHGEF5Q12774 1597 aa32.77■■■□□ 2.84
MDK-213ENST00000617138 NPATQ14207 1427 aa32.76■■■□□ 2.83
MDK-213ENST00000617138 ILDR1Q86SU0 546 aaPredicted RBP32.74■■■□□ 2.83
MDK-213ENST00000617138 C3P01024 1663 aa32.73■■■□□ 2.83
MDK-213ENST00000617138 DMRT2Q9Y5R5 561 aa32.73■■■□□ 2.83
MDK-213ENST00000617138 MROH2AA6NES4 1674 aa32.72■■■□□ 2.83
MDK-213ENST00000617138 KIF3BO15066 747 aa32.67■■■□□ 2.82
MDK-213ENST00000617138 FAM135AQ9P2D6 1515 aa32.62■■■□□ 2.81
MDK-213ENST00000617138 MAST1Q9Y2H9 1570 aa32.59■■■□□ 2.81
MDK-213ENST00000617138 CLTCQ00610 1675 aaKnown RBP32.57■■■□□ 2.8
MDK-213ENST00000617138 FBXO41Q8TF61 875 aa32.57■■■□□ 2.8
MDK-213ENST00000617138 PTPRKQ15262 1439 aa32.57■■■□□ 2.8
MDK-213ENST00000617138 WASHC2CQ9Y4E1 1318 aa32.56■■■□□ 2.8
MDK-213ENST00000617138 KDM5DQ9BY66 1539 aa32.51■■■□□ 2.8
MDK-213ENST00000617138 FGD6Q6ZV73 1430 aa32.51■■■□□ 2.79
MDK-213ENST00000617138 SHANK2Q9UPX8 1470 aa32.49■■■□□ 2.79
MDK-213ENST00000617138 PTPRTO14522 1441 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms