RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 PTPRGP23470 1445 aa19.94■□□□□ 0.78
TNFRSF11A-206ENST00000617039 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
TNFRSF11A-206ENST00000617039 MYOM3Q5VTT5 1437 aa19.93■□□□□ 0.78
TNFRSF11A-206ENST00000617039 WASHC2AQ641Q2 1341 aa19.93■□□□□ 0.78
TNFRSF11A-206ENST00000617039 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
TNFRSF11A-206ENST00000617039 CASKIN1Q8WXD9 1431 aa19.92■□□□□ 0.78
TNFRSF11A-206ENST00000617039 ESF1Q9H501 851 aaKnown RBP19.91■□□□□ 0.78
TNFRSF11A-206ENST00000617039 NBR1Q14596 966 aa19.9■□□□□ 0.78
TNFRSF11A-206ENST00000617039 WDR43Q15061 677 aaKnown RBP eCLIP19.9■□□□□ 0.78
TNFRSF11A-206ENST00000617039 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
TNFRSF11A-206ENST00000617039 SOX12O15370 315 aa19.88■□□□□ 0.77
TNFRSF11A-206ENST00000617039 DAXXQ9UER7 740 aaPredicted RBP19.88■□□□□ 0.77
TNFRSF11A-206ENST00000617039 NBPF1Q3BBV0 1214 aa19.87■□□□□ 0.77
TNFRSF11A-206ENST00000617039 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
TNFRSF11A-206ENST00000617039 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
TNFRSF11A-206ENST00000617039 ANKRD30AQ9BXX3 1397 aa19.87■□□□□ 0.77
TNFRSF11A-206ENST00000617039 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
TNFRSF11A-206ENST00000617039 TIMELESSQ9UNS1 1208 aa19.86■□□□□ 0.77
TNFRSF11A-206ENST00000617039 KNSTRNQ9Y448 316 aa19.86■□□□□ 0.77
TNFRSF11A-206ENST00000617039 ARID4BQ4LE39 1312 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF11A-206ENST00000617039 SNAPC4Q5SXM2 1469 aa19.85■□□□□ 0.77
TNFRSF11A-206ENST00000617039 ROCK2O75116 1388 aaKnown RBP19.85■□□□□ 0.77
TNFRSF11A-206ENST00000617039 EFCAB2Q5VUJ9 269 aa19.85■□□□□ 0.77
TNFRSF11A-206ENST00000617039 PLB1Q6P1J6 1458 aa19.84■□□□□ 0.77
TNFRSF11A-206ENST00000617039 PRKRIP1Q9H875 184 aaPredicted RBP19.83■□□□□ 0.77
TNFRSF11A-206ENST00000617039 MYT1Q01538 1121 aa19.82■□□□□ 0.76
TNFRSF11A-206ENST00000617039 NUTM2FA1L443 756 aa19.81■□□□□ 0.76
TNFRSF11A-206ENST00000617039 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
TNFRSF11A-206ENST00000617039 DNMBPQ6XZF7 1577 aa19.81■□□□□ 0.76
TNFRSF11A-206ENST00000617039 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
TNFRSF11A-206ENST00000617039 CCDC146Q8IYE0 955 aa19.8■□□□□ 0.76
TNFRSF11A-206ENST00000617039 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
TNFRSF11A-206ENST00000617039 TRAK1Q9UPV9 953 aa19.79■□□□□ 0.76
TNFRSF11A-206ENST00000617039 SPAG9O60271 1321 aaKnown RBP19.79■□□□□ 0.76
TNFRSF11A-206ENST00000617039 TSHZ2Q9NRE2 1034 aa19.78■□□□□ 0.76
TNFRSF11A-206ENST00000617039 CCER2I3L3R5 266 aa19.78■□□□□ 0.76
TNFRSF11A-206ENST00000617039 PLIN1O60240 522 aa19.77■□□□□ 0.76
TNFRSF11A-206ENST00000617039 UACAQ9BZF9 1416 aa19.76■□□□□ 0.75
TNFRSF11A-206ENST00000617039 NAIPQ13075 1403 aa19.76■□□□□ 0.75
TNFRSF11A-206ENST00000617039 ZBTB7CA1YPR0 619 aa19.75■□□□□ 0.75
TNFRSF11A-206ENST00000617039 PANK3Q9H999 370 aa19.74■□□□□ 0.75
TNFRSF11A-206ENST00000617039 FYCO1Q9BQS8 1478 aa19.74■□□□□ 0.75
TNFRSF11A-206ENST00000617039 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
TNFRSF11A-206ENST00000617039 USP47Q96K76 1375 aa19.73■□□□□ 0.75
TNFRSF11A-206ENST00000617039 KIF15Q9NS87 1388 aa19.72■□□□□ 0.75
TNFRSF11A-206ENST00000617039 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
TNFRSF11A-206ENST00000617039 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
TNFRSF11A-206ENST00000617039 TMF1P82094 1093 aa19.71■□□□□ 0.75
TNFRSF11A-206ENST00000617039 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
TNFRSF11A-206ENST00000617039 RBM19Q9Y4C8 960 aaKnown RBP19.7■□□□□ 0.74
TNFRSF11A-206ENST00000617039 U2SURPO15042 1029 aaKnown RBP19.69■□□□□ 0.74
TNFRSF11A-206ENST00000617039 LAS1LQ9Y4W2 734 aaKnown RBP19.69■□□□□ 0.74
TNFRSF11A-206ENST00000617039 RGS3P49796 1198 aa19.69■□□□□ 0.74
TNFRSF11A-206ENST00000617039 RRP7AQ9Y3A4 280 aaKnown RBP19.69■□□□□ 0.74
TNFRSF11A-206ENST00000617039 EPRSP07814 1512 aaKnown RBP19.68■□□□□ 0.74
TNFRSF11A-206ENST00000617039 ANKRD50Q9ULJ7 1429 aa19.68■□□□□ 0.74
TNFRSF11A-206ENST00000617039 C14orf37Q86TY3 774 aa19.67■□□□□ 0.74
TNFRSF11A-206ENST00000617039 POGKQ9P215 609 aa19.67■□□□□ 0.74
TNFRSF11A-206ENST00000617039 SRPK2P78362 688 aaKnown RBP19.66■□□□□ 0.74
TNFRSF11A-206ENST00000617039 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF11A-206ENST00000617039 WASHC2CQ9Y4E1 1318 aa19.64■□□□□ 0.73
TNFRSF11A-206ENST00000617039 ARXQ96QS3 562 aa19.64■□□□□ 0.73
TNFRSF11A-206ENST00000617039 HFM1A2PYH4 1435 aa19.63■□□□□ 0.73
TNFRSF11A-206ENST00000617039 RAPGEF3O95398 923 aa19.63■□□□□ 0.73
TNFRSF11A-206ENST00000617039 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
TNFRSF11A-206ENST00000617039 CCDC7Q96M83 1385 aa19.61■□□□□ 0.73
TNFRSF11A-206ENST00000617039 RTL5Q5HYW3 569 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF11A-206ENST00000617039 ANP32AP39687 249 aaKnown RBP19.61■□□□□ 0.73
TNFRSF11A-206ENST00000617039 CCDC144AA2RUR9 1427 aa19.61■□□□□ 0.73
TNFRSF11A-206ENST00000617039 CDCA7LQ96GN5 454 aa19.61■□□□□ 0.73
TNFRSF11A-206ENST00000617039 CFAP70Q5T0N1 1121 aa19.6■□□□□ 0.73
TNFRSF11A-206ENST00000617039 PPP4R2Q9NY27 417 aa19.6■□□□□ 0.73
TNFRSF11A-206ENST00000617039 BCL2L13Q9BXK5 485 aa19.59■□□□□ 0.73
TNFRSF11A-206ENST00000617039 MAPKBP1O60336 1514 aa19.57■□□□□ 0.72
TNFRSF11A-206ENST00000617039 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
TNFRSF11A-206ENST00000617039 NEFMP07197 916 aa19.56■□□□□ 0.72
TNFRSF11A-206ENST00000617039 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
TNFRSF11A-206ENST00000617039 CLUAP1Q96AJ1 413 aa19.56■□□□□ 0.72
TNFRSF11A-206ENST00000617039 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
TNFRSF11A-206ENST00000617039 DAPK1P53355 1430 aa19.55■□□□□ 0.72
TNFRSF11A-206ENST00000617039 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
TNFRSF11A-206ENST00000617039 MORC1Q86VD1 984 aa19.54■□□□□ 0.72
TNFRSF11A-206ENST00000617039 ABCC5O15440 1437 aa19.54■□□□□ 0.72
TNFRSF11A-206ENST00000617039 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
TNFRSF11A-206ENST00000617039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.53■□□□□ 0.72
TNFRSF11A-206ENST00000617039 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.72
TNFRSF11A-206ENST00000617039 IQGAP2Q13576 1575 aa19.52■□□□□ 0.71
TNFRSF11A-206ENST00000617039 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF11A-206ENST00000617039 KTN1Q86UP2 1357 aaKnown RBP19.51■□□□□ 0.71
TNFRSF11A-206ENST00000617039 RCAN3Q9UKA8 241 aa19.5■□□□□ 0.71
TNFRSF11A-206ENST00000617039 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
TNFRSF11A-206ENST00000617039 KIAA0586Q9BVV6 1533 aa19.5■□□□□ 0.71
TNFRSF11A-206ENST00000617039 EXOC6Q8TAG9 804 aa19.5■□□□□ 0.71
TNFRSF11A-206ENST00000617039 GRIN2AQ12879 1464 aa19.49■□□□□ 0.71
TNFRSF11A-206ENST00000617039 MINK1Q8N4C8 1332 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF11A-206ENST00000617039 U2AF1L5P0DN76 240 aaPredicted RBP19.48■□□□□ 0.71
TNFRSF11A-206ENST00000617039 U2AF1Q01081 240 aaKnown RBP eCLIP19.48■□□□□ 0.71
TNFRSF11A-206ENST00000617039 KANK1Q14678 1352 aa19.48■□□□□ 0.71
TNFRSF11A-206ENST00000617039 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
TNFRSF11A-206ENST00000617039 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms