RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 SPRYD3Q8NCJ5 442 aa5□□□□□ -1.61
LTN1-207ENST00000614971 ST20-MTHFSA0A0A6YYL1 179 aa5□□□□□ -1.61
LTN1-207ENST00000614971 LTV1Q96GA3 475 aaPredicted RBP4.99□□□□□ -1.61
LTN1-207ENST00000614971 AMER1Q5JTC6 1135 aaPredicted RBP4.99□□□□□ -1.61
LTN1-207ENST00000614971 FTSJ3Q8IY81 847 aaKnown RBP4.99□□□□□ -1.61
LTN1-207ENST00000614971 CLUAP1Q96AJ1 413 aa4.99□□□□□ -1.61
LTN1-207ENST00000614971 ZNF330Q9Y3S2 320 aaPredicted RBP4.99□□□□□ -1.61
LTN1-207ENST00000614971 EFCAB2Q5VUJ9 269 aa4.99□□□□□ -1.61
LTN1-207ENST00000614971 TMF1P82094 1093 aa4.98□□□□□ -1.61
LTN1-207ENST00000614971 MORC1Q86VD1 984 aa4.98□□□□□ -1.61
LTN1-207ENST00000614971 WASHC2CQ9Y4E1 1318 aa4.98□□□□□ -1.61
LTN1-207ENST00000614971 ROCK2O75116 1388 aaKnown RBP4.98□□□□□ -1.61
LTN1-207ENST00000614971 UPF2Q9HAU5 1272 aaKnown RBP4.98□□□□□ -1.61
LTN1-207ENST00000614971 MAPK8IP3Q9UPT6 1336 aa4.98□□□□□ -1.61
LTN1-207ENST00000614971 EIF5BO60841 1220 aaKnown RBP4.98□□□□□ -1.61
LTN1-207ENST00000614971 BCL2L13Q9BXK5 485 aa4.98□□□□□ -1.61
LTN1-207ENST00000614971 IGF1RP08069 1367 aa4.98□□□□□ -1.61
LTN1-207ENST00000614971 FGD5Q6ZNL6 1462 aa4.98□□□□□ -1.61
LTN1-207ENST00000614971 ELL2O00472 640 aaPredicted RBP4.98□□□□□ -1.61
LTN1-207ENST00000614971 U2AF1L5P0DN76 240 aaPredicted RBP4.98□□□□□ -1.61
LTN1-207ENST00000614971 U2AF1Q01081 240 aaKnown RBP eCLIP4.98□□□□□ -1.613e-9■■■■□ 22.1
LTN1-207ENST00000614971 CFAP53Q96M91 514 aa4.98□□□□□ -1.61
LTN1-207ENST00000614971 SPAG9O60271 1321 aaKnown RBP4.98□□□□□ -1.61
LTN1-207ENST00000614971 AFAP1Q8N556 730 aa4.97□□□□□ -1.61
LTN1-207ENST00000614971 CARMIL2Q6F5E8 1435 aa4.97□□□□□ -1.61
LTN1-207ENST00000614971 TCERG1O14776 1098 aaKnown RBP4.97□□□□□ -1.61
LTN1-207ENST00000614971 PLIN1O60240 522 aa4.97□□□□□ -1.61
LTN1-207ENST00000614971 ZNF428Q96B54 188 aa4.96□□□□□ -1.62
LTN1-207ENST00000614971 FMN1Q68DA7 1419 aa4.96□□□□□ -1.62
LTN1-207ENST00000614971 RTN4Q9NQC3 1192 aaKnown RBP4.96□□□□□ -1.62
LTN1-207ENST00000614971 DHX57Q6P158 1386 aaKnown RBP4.96□□□□□ -1.62
LTN1-207ENST00000614971 TMEM132EQ6IEE7 984 aa4.96□□□□□ -1.62
LTN1-207ENST00000614971 MYH16Q9H6N6 1097 aa4.95□□□□□ -1.62
LTN1-207ENST00000614971 PHLDB1Q86UU1 1377 aa4.95□□□□□ -1.62
LTN1-207ENST00000614971 MINK1Q8N4C8 1332 aaPredicted RBP4.95□□□□□ -1.62
LTN1-207ENST00000614971 TULP1O00294 542 aaPredicted RBP4.95□□□□□ -1.62
LTN1-207ENST00000614971 CDCA8Q53HL2 280 aa4.95□□□□□ -1.62
LTN1-207ENST00000614971 KANK1Q14678 1352 aa4.94□□□□□ -1.62
LTN1-207ENST00000614971 PTPRGP23470 1445 aa4.94□□□□□ -1.62
LTN1-207ENST00000614971 NUTM2GQ5VZR2 741 aa4.94□□□□□ -1.62
LTN1-207ENST00000614971 PANK3Q9H999 370 aa4.94□□□□□ -1.62
LTN1-207ENST00000614971 NUDCQ9Y266 331 aa4.94□□□□□ -1.62
LTN1-207ENST00000614971 ANKRD30AQ9BXX3 1397 aa4.94□□□□□ -1.62
LTN1-207ENST00000614971 FAM69CQ0P6D2 419 aa4.94□□□□□ -1.62
LTN1-207ENST00000614971 GAPVD1Q14C86 1478 aa4.93□□□□□ -1.62
LTN1-207ENST00000614971 NPHP1O15259 732 aa4.93□□□□□ -1.62
LTN1-207ENST00000614971 NCLP19338 710 aaKnown RBP4.93□□□□□ -1.62
LTN1-207ENST00000614971 NECTIN2Q92692 538 aa4.93□□□□□ -1.62
LTN1-207ENST00000614971 OSCARQ8IYS5 282 aa4.92□□□□□ -1.62
LTN1-207ENST00000614971 CSB-PGBD3P0DP91 1061 aa4.92□□□□□ -1.62
LTN1-207ENST00000614971 CCDC9Q9Y3X0 531 aaKnown RBP4.92□□□□□ -1.62
LTN1-207ENST00000614971 NGDNQ8NEJ9 315 aaKnown RBP4.92□□□□□ -1.62
LTN1-207ENST00000614971 PRDM2Q13029 1718 aa4.92□□□□□ -1.62
LTN1-207ENST00000614971 SYNJ1O43426 1573 aa4.92□□□□□ -1.62
LTN1-207ENST00000614971 OS9Q13438 667 aaPredicted RBP4.92□□□□□ -1.62
LTN1-207ENST00000614971 ARAP1Q96P48 1450 aa4.92□□□□□ -1.62
LTN1-207ENST00000614971 RAPGEF3O95398 923 aa4.91□□□□□ -1.62
LTN1-207ENST00000614971 SLC4A10Q6U841 1118 aa4.91□□□□□ -1.62
LTN1-207ENST00000614971 PPP4R2Q9NY27 417 aa4.91□□□□□ -1.62
LTN1-207ENST00000614971 NAP1L2Q9ULW6 460 aaPredicted RBP4.91□□□□□ -1.62
LTN1-207ENST00000614971 NBPF1Q3BBV0 1214 aa4.91□□□□□ -1.62
LTN1-207ENST00000614971 RBM33Q96EV2 1170 aaKnown RBP4.91□□□□□ -1.62
LTN1-207ENST00000614971 RCAN3Q9UKA8 241 aa4.91□□□□□ -1.62
LTN1-207ENST00000614971 KTN1Q86UP2 1357 aaKnown RBP4.9□□□□□ -1.62
LTN1-207ENST00000614971 NGEFQ8N5V2 710 aa4.9□□□□□ -1.62
LTN1-207ENST00000614971 ITPRIPQ8IWB1 547 aa4.9□□□□□ -1.62
LTN1-207ENST00000614971 RBM19Q9Y4C8 960 aaKnown RBP4.9□□□□□ -1.63
LTN1-207ENST00000614971 SLC4A3P48751 1232 aa4.9□□□□□ -1.63
LTN1-207ENST00000614971 CCDC18Q5T9S5 1454 aa4.9□□□□□ -1.63
LTN1-207ENST00000614971 HDGFL2Q7Z4V5 671 aaPredicted RBP4.9□□□□□ -1.63
LTN1-207ENST00000614971 SLKQ9H2G2 1235 aaPredicted RBP4.9□□□□□ -1.63
LTN1-207ENST00000614971 APAF1O14727 1248 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 CCDC184Q52MB2 194 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 FOXD4L1Q9NU39 408 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 CFAP70Q5T0N1 1121 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 CABP2Q9NPB3 220 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 CFTRP13569 1480 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 HMOX1P09601 288 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 NOL8Q76FK4 1167 aaKnown RBP4.89□□□□□ -1.63
LTN1-207ENST00000614971 RTF1Q92541 710 aaKnown RBP4.89□□□□□ -1.63
LTN1-207ENST00000614971 GGNBP2Q9H3C7 697 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 CCDC144AA2RUR9 1427 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 PRKRIP1Q9H875 184 aaPredicted RBP4.89□□□□□ -1.63
LTN1-207ENST00000614971 KIF21BO75037 1637 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 PLCB2Q00722 1185 aa4.89□□□□□ -1.63
LTN1-207ENST00000614971 USP47Q96K76 1375 aa4.88□□□□□ -1.63
LTN1-207ENST00000614971 SMC4Q9NTJ3 1288 aa4.88□□□□□ -1.63
LTN1-207ENST00000614971 USP35Q9P2H5 1018 aa4.88□□□□□ -1.63
LTN1-207ENST00000614971 AMPHP49418 695 aa4.88□□□□□ -1.63
LTN1-207ENST00000614971 PRG4Q92954 1404 aaPredicted RBP4.88□□□□□ -1.63
LTN1-207ENST00000614971 NBPF8Q3BBV2 869 aa4.88□□□□□ -1.63
LTN1-207ENST00000614971 CHMP3Q9Y3E7 222 aa4.88□□□□□ -1.63
LTN1-207ENST00000614971 CC2D2AQ9P2K1 1620 aa4.88□□□□□ -1.63
LTN1-207ENST00000614971 KIF15Q9NS87 1388 aa4.88□□□□□ -1.63
LTN1-207ENST00000614971 KAT6BQ8WYB5 2073 aa4.87□□□□□ -1.63
LTN1-207ENST00000614971 KCNJ4P48050 445 aa4.87□□□□□ -1.63
LTN1-207ENST00000614971 GZF1Q9H116 711 aaPredicted RBP4.87□□□□□ -1.63
LTN1-207ENST00000614971 EXOC6Q8TAG9 804 aa4.87□□□□□ -1.63
LTN1-207ENST00000614971 CDCA7LQ96GN5 454 aa4.87□□□□□ -1.63
LTN1-207ENST00000614971 CCER2I3L3R5 266 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms