RNA–Protein interactions for RNA: ENST00000614000.4

SYNRG-220, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 4,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-220ENST00000614000 ASXL2Q76L83 1435 aa8.21□□□□□ -1.09
SYNRG-220ENST00000614000 INO80Q9ULG1 1556 aaPredicted RBP8.2□□□□□ -1.1
SYNRG-220ENST00000614000 ADGBQ8N7X0 1667 aa8.2□□□□□ -1.1
SYNRG-220ENST00000614000 ABCC1P33527 1531 aa8.2□□□□□ -1.1
SYNRG-220ENST00000614000 CDK13Q14004 1512 aaKnown RBP8.2□□□□□ -1.1
SYNRG-220ENST00000614000 FAM135AQ9P2D6 1515 aa8.19□□□□□ -1.1
SYNRG-220ENST00000614000 LRRC9Q6ZRR7 1453 aa8.19□□□□□ -1.1
SYNRG-220ENST00000614000 PLXNC1O60486 1568 aa8.19□□□□□ -1.1
SYNRG-220ENST00000614000 SAMD9LQ8IVG5 1584 aa8.18□□□□□ -1.1
SYNRG-220ENST00000614000 TEX14Q8IWB6 1497 aa8.18□□□□□ -1.1
SYNRG-220ENST00000614000 EIF2AK4Q9P2K8 1649 aaKnown RBP8.17□□□□□ -1.1
SYNRG-220ENST00000614000 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.17□□□□□ -1.1
SYNRG-220ENST00000614000 TRIM26Q12899 539 aaPredicted RBP8.16□□□□□ -1.1
SYNRG-220ENST00000614000 RANGAP1P46060 587 aaPredicted RBP8.16□□□□□ -1.1
SYNRG-220ENST00000614000 DNMT1P26358 1616 aaKnown RBP8.16□□□□□ -1.1
SYNRG-220ENST00000614000 SHANK2Q9UPX8 1470 aa8.16□□□□□ -1.1
SYNRG-220ENST00000614000 FBLN2P98095 1184 aa8.15□□□□□ -1.11
SYNRG-220ENST00000614000 ARHGEF40Q8TER5 1519 aa8.15□□□□□ -1.11
SYNRG-220ENST00000614000 MIA2Q96PC5 1412 aa8.15□□□□□ -1.11
SYNRG-220ENST00000614000 PLCH2O75038 1416 aa8.14□□□□□ -1.11
SYNRG-220ENST00000614000 DEPDC5O75140 1603 aa8.14□□□□□ -1.11
SYNRG-220ENST00000614000 KIAA1107Q9UPP5 1409 aa8.14□□□□□ -1.11
SYNRG-220ENST00000614000 GCC2Q8IWJ2 1684 aa8.14□□□□□ -1.11
SYNRG-220ENST00000614000 PLEKHH2Q8IVE3 1493 aa8.14□□□□□ -1.11
SYNRG-220ENST00000614000 RNF17Q9BXT8 1623 aaKnown RBP8.13□□□□□ -1.11
SYNRG-220ENST00000614000 MAGI2Q86UL8 1455 aa8.13□□□□□ -1.11
SYNRG-220ENST00000614000 MROH2AA6NES4 1674 aa8.12□□□□□ -1.11
SYNRG-220ENST00000614000 HECW2Q9P2P5 1572 aa8.12□□□□□ -1.11
SYNRG-220ENST00000614000 KIDINS220Q9ULH0 1771 aa8.12□□□□□ -1.11
SYNRG-220ENST00000614000 GPATCH8Q9UKJ3 1502 aaKnown RBP8.12□□□□□ -1.11
SYNRG-220ENST00000614000 PTPN23Q9H3S7 1636 aa8.12□□□□□ -1.11
SYNRG-220ENST00000614000 BCANQ96GW7 911 aa8.11□□□□□ -1.11
SYNRG-220ENST00000614000 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
SYNRG-220ENST00000614000 ADGRL2O95490 1459 aa8.1□□□□□ -1.11
SYNRG-220ENST00000614000 NCOA2Q15596 1464 aa8.1□□□□□ -1.11
SYNRG-220ENST00000614000 AGLP35573 1532 aa8.1□□□□□ -1.11
SYNRG-220ENST00000614000 DIEXFQ68CQ4 756 aaKnown RBP8.1□□□□□ -1.11
SYNRG-220ENST00000614000 ZFYVE16Q7Z3T8 1539 aa8.1□□□□□ -1.11
SYNRG-220ENST00000614000 LOC105371045A0A1W2PR82 267 aa8.1□□□□□ -1.11
SYNRG-220ENST00000614000 KDM6BO15054 1643 aa8.09□□□□□ -1.11
SYNRG-220ENST00000614000 SIGLEC1Q9BZZ2 1709 aa8.09□□□□□ -1.11
SYNRG-220ENST00000614000 RRBP1Q9P2E9 1410 aaKnown RBP8.09□□□□□ -1.11
SYNRG-220ENST00000614000 ABCA6Q8N139 1617 aa8.09□□□□□ -1.11
SYNRG-220ENST00000614000 AKNAQ7Z591 1439 aa8.09□□□□□ -1.11
SYNRG-220ENST00000614000 MLH3Q9UHC1 1453 aa8.09□□□□□ -1.11
SYNRG-220ENST00000614000 MBD5Q9P267 1494 aa8.08□□□□□ -1.12
SYNRG-220ENST00000614000 DIP2CQ9Y2E4 1556 aa8.08□□□□□ -1.12
SYNRG-220ENST00000614000 TSPOAP1O95153 1857 aa8.08□□□□□ -1.12
SYNRG-220ENST00000614000 RTEL1-TNFRSF6BF6WH68 1400 aa8.08□□□□□ -1.12
SYNRG-220ENST00000614000 POGZQ7Z3K3 1410 aa8.08□□□□□ -1.12
SYNRG-220ENST00000614000 KCNA4P22459 653 aa8.08□□□□□ -1.12
SYNRG-220ENST00000614000 UNC13BO14795 1591 aa8.07□□□□□ -1.12
SYNRG-220ENST00000614000 MYOM3Q5VTT5 1437 aa8.07□□□□□ -1.12
SYNRG-220ENST00000614000 VWDEQ8N2E2 1590 aa8.07□□□□□ -1.12
SYNRG-220ENST00000614000 RTL5Q5HYW3 569 aaPredicted RBP8.07□□□□□ -1.12
SYNRG-220ENST00000614000 ADAMTSL3P82987 1691 aa8.07□□□□□ -1.12
SYNRG-220ENST00000614000 KDM5DQ9BY66 1539 aa8.06□□□□□ -1.12
SYNRG-220ENST00000614000 CAMSAP2Q08AD1 1489 aa8.06□□□□□ -1.12
SYNRG-220ENST00000614000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.05□□□□□ -1.12
SYNRG-220ENST00000614000 ARHGEF12Q9NZN5 1544 aa8.05□□□□□ -1.12
SYNRG-220ENST00000614000 KDM5AP29375 1690 aaKnown RBP8.05□□□□□ -1.12
SYNRG-220ENST00000614000 FANCAO15360 1455 aa8.05□□□□□ -1.12
SYNRG-220ENST00000614000 UBTFP17480 764 aaKnown RBP8.05□□□□□ -1.12
SYNRG-220ENST00000614000 ZNF518AQ6AHZ1 1483 aa8.04□□□□□ -1.12
SYNRG-220ENST00000614000 CD109Q6YHK3 1445 aa8.04□□□□□ -1.12
SYNRG-220ENST00000614000 MROH1Q8NDA8 1641 aa8.04□□□□□ -1.12
SYNRG-220ENST00000614000 ACIN1Q9UKV3 1341 aaKnown RBP8.04□□□□□ -1.12
SYNRG-220ENST00000614000 SYCP2Q9BX26 1530 aa8.03□□□□□ -1.12
SYNRG-220ENST00000614000 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
SYNRG-220ENST00000614000 ATP7AQ04656 1500 aa8.03□□□□□ -1.12
SYNRG-220ENST00000614000 EIF5BO60841 1220 aaKnown RBP8.02□□□□□ -1.12
SYNRG-220ENST00000614000 PRDM15P57071 1507 aaPredicted RBP8.02□□□□□ -1.13
SYNRG-220ENST00000614000 ARHGAP5Q13017 1502 aa8.02□□□□□ -1.13
SYNRG-220ENST00000614000 FGD6Q6ZV73 1430 aa8.02□□□□□ -1.13
SYNRG-220ENST00000614000 LMTK2Q8IWU2 1503 aa8.02□□□□□ -1.13
SYNRG-220ENST00000614000 CCDC141Q6ZP82 1450 aa8.01□□□□□ -1.13
SYNRG-220ENST00000614000 SCAF1Q9H7N4 1312 aaKnown RBP8.01□□□□□ -1.13
SYNRG-220ENST00000614000 CNGB1Q14028 1251 aaPredicted RBP8□□□□□ -1.13
SYNRG-220ENST00000614000 NEURL4Q96JN8 1562 aa8□□□□□ -1.13
SYNRG-220ENST00000614000 ZNF142P52746 1687 aaPredicted RBP8□□□□□ -1.13
SYNRG-220ENST00000614000 IQGAP3Q86VI3 1631 aa8□□□□□ -1.13
SYNRG-220ENST00000614000 CYB5RLQ6IPT4 315 aa8□□□□□ -1.13
SYNRG-220ENST00000614000 CDK11AQ9UQ88 783 aaPredicted RBP8□□□□□ -1.13
SYNRG-220ENST00000614000 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
SYNRG-220ENST00000614000 ADGRL1O94910 1474 aa7.99□□□□□ -1.13
SYNRG-220ENST00000614000 ROCK1Q13464 1354 aa7.99□□□□□ -1.13
SYNRG-220ENST00000614000 DENND4BO75064 1496 aaPredicted RBP7.99□□□□□ -1.13
SYNRG-220ENST00000614000 RTN4Q9NQC3 1192 aaKnown RBP7.99□□□□□ -1.13
SYNRG-220ENST00000614000 DUOX2Q9NRD8 1548 aa7.98□□□□□ -1.13
SYNRG-220ENST00000614000 ERBINQ96RT1 1412 aa7.97□□□□□ -1.13
SYNRG-220ENST00000614000 FER1L4A9Z1Z3 1794 aa7.97□□□□□ -1.13
SYNRG-220ENST00000614000 PLEKHD1A6NEE1 506 aa7.96□□□□□ -1.14
SYNRG-220ENST00000614000 NPM1P06748 294 aaKnown RBP eCLIP7.96□□□□□ -1.14
SYNRG-220ENST00000614000 DAPK1P53355 1430 aa7.96□□□□□ -1.14
SYNRG-220ENST00000614000 TET3O43151 1660 aa7.95□□□□□ -1.14
SYNRG-220ENST00000614000 C9orf84Q5VXU9 1444 aa7.95□□□□□ -1.14
SYNRG-220ENST00000614000 MTUS2Q5JR59 1369 aa7.95□□□□□ -1.14
SYNRG-220ENST00000614000 HNRNPUL2Q1KMD3 747 aaKnown RBP7.95□□□□□ -1.14
SYNRG-220ENST00000614000 PIK3C2BO00750 1634 aa7.94□□□□□ -1.14
SYNRG-220ENST00000614000 CAMSAP1Q5T5Y3 1602 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 277.8 ms