RNA–Protein interactions for RNA: ENST00000614000.4

SYNRG-220, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 4,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-220ENST00000614000 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
SYNRG-220ENST00000614000 CCDC180Q9P1Z9 1646 aa11.55□□□□□ -0.56
SYNRG-220ENST00000614000 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
SYNRG-220ENST00000614000 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
SYNRG-220ENST00000614000 ZCCHC6Q5VYS8 1495 aaKnown RBP10.67□□□□□ -0.7
SYNRG-220ENST00000614000 NACADO15069 1562 aa10.62□□□□□ -0.71
SYNRG-220ENST00000614000 RB1CC1Q8TDY2 1594 aa10.52□□□□□ -0.72
SYNRG-220ENST00000614000 UNC13AQ9UPW8 1703 aa10.48□□□□□ -0.73
SYNRG-220ENST00000614000 ABCC9O60706 1549 aa10.45□□□□□ -0.74
SYNRG-220ENST00000614000 SHROOM4Q9ULL8 1493 aa10.43□□□□□ -0.74
SYNRG-220ENST00000614000 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
SYNRG-220ENST00000614000 SCRIBQ14160 1630 aa10.06□□□□□ -0.8
SYNRG-220ENST00000614000 PEG3Q9GZU2 1588 aa9.97□□□□□ -0.81
SYNRG-220ENST00000614000 EIF4G1Q04637 1599 aaKnown RBP9.87□□□□□ -0.83
SYNRG-220ENST00000614000 SMARCA4P51532 1647 aa9.86□□□□□ -0.83
SYNRG-220ENST00000614000 SMARCA2P51531 1590 aa9.84□□□□□ -0.83
SYNRG-220ENST00000614000 BAZ1AQ9NRL2 1556 aaPredicted RBP9.83□□□□□ -0.84
SYNRG-220ENST00000614000 HMGXB3Q12766 1538 aa9.81□□□□□ -0.84
SYNRG-220ENST00000614000 CC2D2AQ9P2K1 1620 aa9.76□□□□□ -0.85
SYNRG-220ENST00000614000 PRDM2Q13029 1718 aa9.7□□□□□ -0.86
SYNRG-220ENST00000614000 NCAPD3P42695 1498 aa9.7□□□□□ -0.86
SYNRG-220ENST00000614000 MROH2BQ7Z745 1585 aa9.65□□□□□ -0.86
SYNRG-220ENST00000614000 ATAD2BQ9ULI0 1458 aa9.64□□□□□ -0.87
SYNRG-220ENST00000614000 CECR2Q9BXF3 1484 aa9.64□□□□□ -0.87
SYNRG-220ENST00000614000 TOP2AP11388 1531 aaKnown RBP9.63□□□□□ -0.87
SYNRG-220ENST00000614000 WIZO95785 1651 aa9.59□□□□□ -0.87
SYNRG-220ENST00000614000 DCAF8L2P0C7V8 631 aa9.58□□□□□ -0.88
SYNRG-220ENST00000614000 AEBP2Q6ZN18 517 aaPredicted RBP9.57□□□□□ -0.88
SYNRG-220ENST00000614000 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
SYNRG-220ENST00000614000 CHIC1Q5VXU3 224 aa9.55□□□□□ -0.88
SYNRG-220ENST00000614000 PABPN1Q86U42 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
SYNRG-220ENST00000614000 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
SYNRG-220ENST00000614000 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
SYNRG-220ENST00000614000 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
SYNRG-220ENST00000614000 DNAJC5BQ9UF47 199 aa9.38□□□□□ -0.91
SYNRG-220ENST00000614000 CFTRP13569 1480 aa9.37□□□□□ -0.91
SYNRG-220ENST00000614000 KIF21AQ7Z4S6 1674 aa9.35□□□□□ -0.91
SYNRG-220ENST00000614000 WDR97A6NE52 1622 aa9.34□□□□□ -0.91
SYNRG-220ENST00000614000 CCDC88BA6NC98 1476 aa9.32□□□□□ -0.92
SYNRG-220ENST00000614000 WDR62O43379 1518 aa9.31□□□□□ -0.92
SYNRG-220ENST00000614000 BIVM-ERCC5R4GMW8 1640 aa9.3□□□□□ -0.92
SYNRG-220ENST00000614000 CADPSQ9ULU8 1353 aa9.25□□□□□ -0.93
SYNRG-220ENST00000614000 CUX2O14529 1486 aa9.23□□□□□ -0.93
SYNRG-220ENST00000614000 DNMBPQ6XZF7 1577 aa9.22□□□□□ -0.93
SYNRG-220ENST00000614000 ABCC8Q09428 1581 aa9.21□□□□□ -0.93
SYNRG-220ENST00000614000 PDS5BQ9NTI5 1447 aa9.19□□□□□ -0.94
SYNRG-220ENST00000614000 MRC2Q9UBG0 1479 aa9.18□□□□□ -0.94
SYNRG-220ENST00000614000 TOP2BQ02880 1626 aa9.18□□□□□ -0.94
SYNRG-220ENST00000614000 TARBP1Q13395 1621 aaKnown RBP9.16□□□□□ -0.94
SYNRG-220ENST00000614000 NESP48681 1621 aa9.16□□□□□ -0.94
SYNRG-220ENST00000614000 FANCD2Q9BXW9 1451 aa9.15□□□□□ -0.94
SYNRG-220ENST00000614000 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
SYNRG-220ENST00000614000 URB2Q14146 1524 aaKnown RBP9.13□□□□□ -0.95
SYNRG-220ENST00000614000 ABCA5Q8WWZ7 1642 aa9.1□□□□□ -0.95
SYNRG-220ENST00000614000 CUX1P39880 1505 aa9.1□□□□□ -0.95
SYNRG-220ENST00000614000 TOPBP1Q92547 1522 aa9.1□□□□□ -0.95
SYNRG-220ENST00000614000 SYNJ1O43426 1573 aa9.07□□□□□ -0.96
SYNRG-220ENST00000614000 PBRM1Q86U86 1689 aa9.07□□□□□ -0.96
SYNRG-220ENST00000614000 IFT140Q96RY7 1462 aa9.04□□□□□ -0.96
SYNRG-220ENST00000614000 ABCA10Q8WWZ4 1543 aa9.03□□□□□ -0.96
SYNRG-220ENST00000614000 EIF4G3O43432 1585 aaKnown RBP9.01□□□□□ -0.97
SYNRG-220ENST00000614000 POLA1P09884 1462 aaPredicted RBP8.99□□□□□ -0.97
SYNRG-220ENST00000614000 ERCC6Q03468 1493 aa8.99□□□□□ -0.97
SYNRG-220ENST00000614000 CUL7Q14999 1698 aa8.99□□□□□ -0.97
SYNRG-220ENST00000614000 ERICH3Q5RHP9 1530 aa8.97□□□□□ -0.97
SYNRG-220ENST00000614000 FGD5Q6ZNL6 1462 aa8.96□□□□□ -0.98
SYNRG-220ENST00000614000 WRNQ14191 1432 aaPredicted RBP eCLIP8.95□□□□□ -0.98
SYNRG-220ENST00000614000 ADAMTS12P58397 1594 aa8.94□□□□□ -0.98
SYNRG-220ENST00000614000 SHROOM2Q13796 1616 aa8.91□□□□□ -0.98
SYNRG-220ENST00000614000 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
SYNRG-220ENST00000614000 CHD1O14646 1710 aa8.9□□□□□ -0.99
SYNRG-220ENST00000614000 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
SYNRG-220ENST00000614000 PELP1Q8IZL8 1130 aaKnown RBP8.89□□□□□ -0.99
SYNRG-220ENST00000614000 CLASP1Q7Z460 1538 aa8.88□□□□□ -0.99
SYNRG-220ENST00000614000 KIF21BO75037 1637 aa8.86□□□□□ -0.99
SYNRG-220ENST00000614000 CTTNBP2Q8WZ74 1663 aa8.86□□□□□ -0.99
SYNRG-220ENST00000614000 EEA1Q15075 1411 aa8.85□□□□□ -0.99
SYNRG-220ENST00000614000 GRIN2BQ13224 1484 aa8.84□□□□□ -0.99
SYNRG-220ENST00000614000 RUSC2Q8N2Y8 1516 aa8.82□□□□□ -1
SYNRG-220ENST00000614000 SOGA1O94964 1423 aa8.82□□□□□ -1
SYNRG-220ENST00000614000 ZNF608Q9ULD9 1512 aaPredicted RBP8.81□□□□□ -1
SYNRG-220ENST00000614000 PCGF6Q9BYE7 350 aa8.81□□□□□ -1
SYNRG-220ENST00000614000 SYNJ2O15056 1496 aa8.8□□□□□ -1
SYNRG-220ENST00000614000 GAPVD1Q14C86 1478 aa8.8□□□□□ -1
SYNRG-220ENST00000614000 RAD54L2Q9Y4B4 1467 aa8.8□□□□□ -1
SYNRG-220ENST00000614000 NUP160Q12769 1436 aa8.79□□□□□ -1
SYNRG-220ENST00000614000 EHMT2Q96KQ7 1210 aa8.78□□□□□ -1
SYNRG-220ENST00000614000 PHF23Q9BUL5 403 aaPredicted RBP8.78□□□□□ -1
SYNRG-220ENST00000614000 PRXQ9BXM0 1461 aa8.77□□□□□ -1.01
SYNRG-220ENST00000614000 CEP170Q5SW79 1584 aa8.77□□□□□ -1.01
SYNRG-220ENST00000614000 FHAD1B1AJZ9 1412 aa8.76□□□□□ -1.01
SYNRG-220ENST00000614000 SNAPC4Q5SXM2 1469 aa8.75□□□□□ -1.01
SYNRG-220ENST00000614000 KIF27Q86VH2 1401 aa8.75□□□□□ -1.01
SYNRG-220ENST00000614000 GRIN2AQ12879 1464 aa8.74□□□□□ -1.01
SYNRG-220ENST00000614000 SAMD9Q5K651 1589 aa8.74□□□□□ -1.01
SYNRG-220ENST00000614000 MYT1Q01538 1121 aa8.74□□□□□ -1.01
SYNRG-220ENST00000614000 UGGT2Q9NYU1 1516 aa8.72□□□□□ -1.01
SYNRG-220ENST00000614000 IGF1RP08069 1367 aa8.69□□□□□ -1.02
SYNRG-220ENST00000614000 AQRO60306 1485 aaKnown RBP eCLIP8.69□□□□□ -1.02
SYNRG-220ENST00000614000 IQGAP2Q13576 1575 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms