RNA–Protein interactions for RNA: ENST00000613953.4

TPI1-210, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-210ENST00000613953 HECW2Q9P2P5 1572 aa38.37■■■■□ 3.73
TPI1-210ENST00000613953 ARID4BQ4LE39 1312 aaPredicted RBP38.35■■■■□ 3.73
TPI1-210ENST00000613953 MAGI2Q86UL8 1455 aa38.35■■■■□ 3.73
TPI1-210ENST00000613953 BCORL1Q5H9F3 1711 aa38.35■■■■□ 3.73
TPI1-210ENST00000613953 FYCO1Q9BQS8 1478 aa38.35■■■■□ 3.73
TPI1-210ENST00000613953 ZFYVE16Q7Z3T8 1539 aa38.34■■■■□ 3.73
TPI1-210ENST00000613953 YEATS2Q9ULM3 1422 aa38.31■■■■□ 3.72
TPI1-210ENST00000613953 PTPRMP28827 1452 aa38.3■■■■□ 3.72
TPI1-210ENST00000613953 ARHGAP5Q13017 1502 aa38.3■■■■□ 3.72
TPI1-210ENST00000613953 MADDQ8WXG6 1647 aa38.25■■■■□ 3.71
TPI1-210ENST00000613953 ZNF518AQ6AHZ1 1483 aa38.2■■■■□ 3.71
TPI1-210ENST00000613953 SIGLEC1Q9BZZ2 1709 aa38.17■■■■□ 3.7
TPI1-210ENST00000613953 PREX2Q70Z35 1606 aa38.17■■■■□ 3.7
TPI1-210ENST00000613953 CDC42BPBQ9Y5S2 1711 aa38.17■■■■□ 3.7
TPI1-210ENST00000613953 KDM5CP41229 1560 aa38.14■■■■□ 3.7
TPI1-210ENST00000613953 ATP10AO60312 1499 aa38.11■■■■□ 3.69
TPI1-210ENST00000613953 C9orf84Q5VXU9 1444 aa38.09■■■■□ 3.69
TPI1-210ENST00000613953 AFAP1Q8N556 730 aa38.09■■■■□ 3.69
TPI1-210ENST00000613953 RIMS1Q86UR5 1692 aaKnown RBP38.08■■■■□ 3.69
TPI1-210ENST00000613953 ABCC1P33527 1531 aa38.07■■■■□ 3.69
TPI1-210ENST00000613953 CDC42BPAQ5VT25 1732 aa38.04■■■■□ 3.68
TPI1-210ENST00000613953 CEP162Q5TB80 1403 aa38.03■■■■□ 3.68
TPI1-210ENST00000613953 ARHGEF12Q9NZN5 1544 aa38.02■■■■□ 3.68
TPI1-210ENST00000613953 TRAPPC8Q9Y2L5 1435 aa37.98■■■■□ 3.67
TPI1-210ENST00000613953 MLECQ14165 292 aa37.98■■■■□ 3.67
TPI1-210ENST00000613953 MLH3Q9UHC1 1453 aa37.98■■■■□ 3.67
TPI1-210ENST00000613953 ITSN2Q9NZM3 1697 aa37.98■■■■□ 3.67
TPI1-210ENST00000613953 DIP2CQ9Y2E4 1556 aa37.96■■■■□ 3.67
TPI1-210ENST00000613953 GPATCH8Q9UKJ3 1502 aaKnown RBP37.96■■■■□ 3.67
TPI1-210ENST00000613953 FER1L4A9Z1Z3 1794 aa37.93■■■■□ 3.66
TPI1-210ENST00000613953 MYT1LQ9UL68 1186 aa37.93■■■■□ 3.66
TPI1-210ENST00000613953 MTUS2Q5JR59 1369 aa37.92■■■■□ 3.66
TPI1-210ENST00000613953 LMTK3Q96Q04 1460 aa37.91■■■■□ 3.66
TPI1-210ENST00000613953 REREQ9P2R6 1566 aa37.91■■■■□ 3.66
TPI1-210ENST00000613953 ABCA6Q8N139 1617 aa37.91■■■■□ 3.66
TPI1-210ENST00000613953 SAMD9LQ8IVG5 1584 aa37.9■■■■□ 3.66
TPI1-210ENST00000613953 ZNF777Q9ULD5 760 aaPredicted RBP37.87■■■■□ 3.65
TPI1-210ENST00000613953 CCNB3Q8WWL7 1395 aa37.86■■■■□ 3.65
TPI1-210ENST00000613953 SYCP2Q9BX26 1530 aa37.84■■■■□ 3.65
TPI1-210ENST00000613953 PLPPR3Q6T4P5 718 aa37.83■■■■□ 3.65
TPI1-210ENST00000613953 EHBP1L1Q8N3D4 1523 aa37.83■■■■□ 3.65
TPI1-210ENST00000613953 CFDP1Q9UEE9 299 aaPredicted RBP37.81■■■■□ 3.64
TPI1-210ENST00000613953 KIDINS220Q9ULH0 1771 aa37.81■■■■□ 3.64
TPI1-210ENST00000613953 KIAA1107Q9UPP5 1409 aa37.79■■■■□ 3.64
TPI1-210ENST00000613953 AGLP35573 1532 aa37.78■■■■□ 3.64
TPI1-210ENST00000613953 PLEKHH2Q8IVE3 1493 aa37.78■■■■□ 3.64
TPI1-210ENST00000613953 HNRNPMP52272 730 aaKnown RBP eCLIP37.74■■■■□ 3.63
TPI1-210ENST00000613953 TIAM1Q13009 1591 aa37.74■■■■□ 3.63
TPI1-210ENST00000613953 LOC105371045A0A1W2PR82 267 aa37.71■■■■□ 3.63
TPI1-210ENST00000613953 ILDR1Q86SU0 546 aaPredicted RBP37.71■■■■□ 3.63
TPI1-210ENST00000613953 SPAG9O60271 1321 aaKnown RBP37.7■■■■□ 3.63
TPI1-210ENST00000613953 CEBPAP49715 358 aaPredicted RBP37.65■■■■□ 3.62
TPI1-210ENST00000613953 HSPA2P54652 639 aa37.65■■■■□ 3.62
TPI1-210ENST00000613953 ATP7AQ04656 1500 aa37.65■■■■□ 3.62
TPI1-210ENST00000613953 INO80Q9ULG1 1556 aaPredicted RBP37.64■■■■□ 3.62
TPI1-210ENST00000613953 VPS8Q8N3P4 1428 aa37.63■■■■□ 3.61
TPI1-210ENST00000613953 ZNF644Q9H582 1327 aaPredicted RBP37.6■■■■□ 3.61
TPI1-210ENST00000613953 NCOA2Q15596 1464 aa37.58■■■■□ 3.61
TPI1-210ENST00000613953 PREX1Q8TCU6 1659 aa37.58■■■■□ 3.61
TPI1-210ENST00000613953 SUPT6HQ7KZ85 1726 aaKnown RBP37.57■■■■□ 3.6
TPI1-210ENST00000613953 MBD5Q9P267 1494 aa37.56■■■■□ 3.6
TPI1-210ENST00000613953 ESF1Q9H501 851 aaKnown RBP37.56■■■■□ 3.6
TPI1-210ENST00000613953 PLXNC1O60486 1568 aa37.54■■■■□ 3.6
TPI1-210ENST00000613953 CNTLNQ9NXG0 1405 aa37.53■■■■□ 3.6
TPI1-210ENST00000613953 C3P01024 1663 aa37.52■■■■□ 3.6
TPI1-210ENST00000613953 A2MP01023 1474 aa37.52■■■■□ 3.6
TPI1-210ENST00000613953 UHRF1BP1Q6BDS2 1440 aa37.48■■■■□ 3.59
TPI1-210ENST00000613953 LRRC9Q6ZRR7 1453 aa37.47■■■■□ 3.59
TPI1-210ENST00000613953 CAMSAP2Q08AD1 1489 aa37.44■■■■□ 3.58
TPI1-210ENST00000613953 RTEL1-TNFRSF6BF6WH68 1400 aa37.44■■■■□ 3.58
TPI1-210ENST00000613953 ADGBQ8N7X0 1667 aa37.43■■■■□ 3.58
TPI1-210ENST00000613953 SETD1BQ9UPS6 1966 aaKnown RBP37.42■■■■□ 3.58
TPI1-210ENST00000613953 MAP3K1Q13233 1512 aa37.41■■■■□ 3.58
TPI1-210ENST00000613953 CCDC141Q6ZP82 1450 aa37.41■■■■□ 3.58
TPI1-210ENST00000613953 MROH2AA6NES4 1674 aa37.41■■■■□ 3.58
TPI1-210ENST00000613953 RSPH4AQ5TD94 716 aa37.34■■■■□ 3.57
TPI1-210ENST00000613953 ZMYM3Q14202 1370 aa37.34■■■■□ 3.57
TPI1-210ENST00000613953 NPATQ14207 1427 aa37.33■■■■□ 3.57
TPI1-210ENST00000613953 FBXO41Q8TF61 875 aa37.32■■■■□ 3.56
TPI1-210ENST00000613953 KANK4Q5T7N3 995 aaPredicted RBP37.31■■■■□ 3.56
TPI1-210ENST00000613953 GGT6Q6P531 493 aa37.31■■■■□ 3.56
TPI1-210ENST00000613953 ARHGEF5Q12774 1597 aa37.3■■■■□ 3.56
TPI1-210ENST00000613953 DHX29Q7Z478 1369 aaKnown RBP37.3■■■■□ 3.56
TPI1-210ENST00000613953 CLTCQ00610 1675 aaKnown RBP37.29■■■■□ 3.56
TPI1-210ENST00000613953 PPP6R1Q9UPN7 881 aa37.27■■■■□ 3.56
TPI1-210ENST00000613953 STRCQ7RTU9 1775 aa37.25■■■■□ 3.55
TPI1-210ENST00000613953 DMRT2Q9Y5R5 561 aa37.21■■■■□ 3.55
TPI1-210ENST00000613953 MYOM3Q5VTT5 1437 aa37.2■■■■□ 3.55
TPI1-210ENST00000613953 MIA2Q96PC5 1412 aa37.19■■■■□ 3.54
TPI1-210ENST00000613953 TSPY4P0CV99 314 aa37.18■■■■□ 3.54
TPI1-210ENST00000613953 TSPY10P0CW01 314 aa37.18■■■■□ 3.54
TPI1-210ENST00000613953 PTPRKQ15262 1439 aa37.18■■■■□ 3.54
TPI1-210ENST00000613953 KIF3BO15066 747 aa37.14■■■■□ 3.54
TPI1-210ENST00000613953 NCOA1Q15788 1441 aa37.12■■■■□ 3.53
TPI1-210ENST00000613953 MAST1Q9Y2H9 1570 aa37.12■■■■□ 3.53
TPI1-210ENST00000613953 FAM135AQ9P2D6 1515 aa37.11■■■■□ 3.53
TPI1-210ENST00000613953 PTPRTO14522 1441 aa37.11■■■■□ 3.53
TPI1-210ENST00000613953 MYO3AQ8NEV4 1616 aa37.11■■■■□ 3.53
TPI1-210ENST00000613953 APLP2Q06481 763 aa37.1■■■■□ 3.53
TPI1-210ENST00000613953 CERKQ8TCT0 537 aa37.09■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms