RNA–Protein interactions for RNA: ENST00000611216.4

KDM2B-219, Transcript of lysine demethylase 2B, humanhuman

TSL 5 BASIC

Gene KDM2B, Length 3,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-219ENST00000611216 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
KDM2B-219ENST00000611216 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
KDM2B-219ENST00000611216 CFDP1Q9UEE9 299 aaPredicted RBP17.87■□□□□ 0.45
KDM2B-219ENST00000611216 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
KDM2B-219ENST00000611216 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
KDM2B-219ENST00000611216 CDK11AQ9UQ88 783 aaPredicted RBP17.84■□□□□ 0.45
KDM2B-219ENST00000611216 CCDC7Q96M83 1385 aa17.84■□□□□ 0.45
KDM2B-219ENST00000611216 MSH5O43196 834 aa17.83■□□□□ 0.45
KDM2B-219ENST00000611216 PKD2Q13563 968 aa17.82■□□□□ 0.44
KDM2B-219ENST00000611216 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
KDM2B-219ENST00000611216 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
KDM2B-219ENST00000611216 IQGAP2Q13576 1575 aa17.8■□□□□ 0.44
KDM2B-219ENST00000611216 CNTLNQ9NXG0 1405 aa17.8■□□□□ 0.44
KDM2B-219ENST00000611216 ABCC5O15440 1437 aa17.79■□□□□ 0.44
KDM2B-219ENST00000611216 ANKRD30BQ9BXX2 1392 aa17.78■□□□□ 0.44
KDM2B-219ENST00000611216 DAPK1P53355 1430 aa17.78■□□□□ 0.44
KDM2B-219ENST00000611216 HECW1Q76N89 1606 aa17.77■□□□□ 0.43
KDM2B-219ENST00000611216 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
KDM2B-219ENST00000611216 ARHGEF11O15085 1522 aa17.75■□□□□ 0.43
KDM2B-219ENST00000611216 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
KDM2B-219ENST00000611216 TCOF1Q13428 1488 aaKnown RBP17.73■□□□□ 0.43
KDM2B-219ENST00000611216 PLB1Q6P1J6 1458 aa17.72■□□□□ 0.43
KDM2B-219ENST00000611216 RGL3Q3MIN7 710 aa17.72■□□□□ 0.43
KDM2B-219ENST00000611216 NCOA1Q15788 1441 aa17.72■□□□□ 0.43
KDM2B-219ENST00000611216 WDR62O43379 1518 aa17.71■□□□□ 0.43
KDM2B-219ENST00000611216 MIA2Q96PC5 1412 aa17.71■□□□□ 0.43
KDM2B-219ENST00000611216 HNRNPMP52272 730 aaKnown RBP eCLIP17.7■□□□□ 0.42
KDM2B-219ENST00000611216 NUP153P49790 1475 aaKnown RBP17.7■□□□□ 0.42
KDM2B-219ENST00000611216 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
KDM2B-219ENST00000611216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■■■□ 21.3
KDM2B-219ENST00000611216 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
KDM2B-219ENST00000611216 AKNAQ7Z591 1439 aa17.69■□□□□ 0.42
KDM2B-219ENST00000611216 DCAF11Q8TEB1 546 aa17.69■□□□□ 0.42
KDM2B-219ENST00000611216 PBRM1Q86U86 1689 aa17.68■□□□□ 0.42
KDM2B-219ENST00000611216 RPRD2Q5VT52 1461 aaKnown RBP17.68■□□□□ 0.42
KDM2B-219ENST00000611216 USP47Q96K76 1375 aa17.68■□□□□ 0.42
KDM2B-219ENST00000611216 ADAMTS12P58397 1594 aa17.67■□□□□ 0.42
KDM2B-219ENST00000611216 TMC1Q8TDI8 760 aa17.67■□□□□ 0.42
KDM2B-219ENST00000611216 NUP155O75694 1391 aa17.67■□□□□ 0.42
KDM2B-219ENST00000611216 DISP1Q96F81 1524 aa17.66■□□□□ 0.42
KDM2B-219ENST00000611216 ST20-MTHFSA0A0A6YYL1 179 aa17.66■□□□□ 0.42
KDM2B-219ENST00000611216 GCC2Q8IWJ2 1684 aa17.66■□□□□ 0.42
KDM2B-219ENST00000611216 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
KDM2B-219ENST00000611216 ZBED9Q6R2W3 1325 aa17.65■□□□□ 0.42
KDM2B-219ENST00000611216 TEX14Q8IWB6 1497 aa17.64■□□□□ 0.42
KDM2B-219ENST00000611216 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.42
KDM2B-219ENST00000611216 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
KDM2B-219ENST00000611216 CAMSAP2Q08AD1 1489 aa17.61■□□□□ 0.41
KDM2B-219ENST00000611216 TSPY4P0CV99 314 aa17.61■□□□□ 0.41
KDM2B-219ENST00000611216 TSPY10P0CW01 314 aa17.61■□□□□ 0.41
KDM2B-219ENST00000611216 PZPP20742 1482 aa17.6■□□□□ 0.41
KDM2B-219ENST00000611216 KIAA0586Q9BVV6 1533 aa17.59■□□□□ 0.41
KDM2B-219ENST00000611216 CCDC136Q96JN2 1154 aa17.59■□□□□ 0.41
KDM2B-219ENST00000611216 ROCK1Q13464 1354 aa17.59■□□□□ 0.41
KDM2B-219ENST00000611216 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
KDM2B-219ENST00000611216 SPATA31E1Q6ZUB1 1445 aa17.59■□□□□ 0.41
KDM2B-219ENST00000611216 NBR1Q14596 966 aa17.58■□□□□ 0.4
KDM2B-219ENST00000611216 KIAA0556O60303 1618 aa17.57■□□□□ 0.4
KDM2B-219ENST00000611216 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
KDM2B-219ENST00000611216 TROQ12816 1431 aaPredicted RBP17.57■□□□□ 0.4
KDM2B-219ENST00000611216 ANKRD50Q9ULJ7 1429 aa17.57■□□□□ 0.4
KDM2B-219ENST00000611216 GPATCH8Q9UKJ3 1502 aaKnown RBP17.57■□□□□ 0.4
KDM2B-219ENST00000611216 KIF14Q15058 1648 aa17.56■□□□□ 0.4
KDM2B-219ENST00000611216 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
KDM2B-219ENST00000611216 DHX29Q7Z478 1369 aaKnown RBP17.55■□□□□ 0.4
KDM2B-219ENST00000611216 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
KDM2B-219ENST00000611216 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
KDM2B-219ENST00000611216 NBPF1Q3BBV0 1214 aa17.54■□□□□ 0.4
KDM2B-219ENST00000611216 DNMT1P26358 1616 aaKnown RBP17.54■□□□□ 0.4
KDM2B-219ENST00000611216 RAPGEF6Q8TEU7 1601 aa17.54■□□□□ 0.4
KDM2B-219ENST00000611216 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
KDM2B-219ENST00000611216 IFT140Q96RY7 1462 aa17.52■□□□□ 0.4
KDM2B-219ENST00000611216 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
KDM2B-219ENST00000611216 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
KDM2B-219ENST00000611216 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.39
KDM2B-219ENST00000611216 BCORL1Q5H9F3 1711 aa17.49■□□□□ 0.39
KDM2B-219ENST00000611216 PAK3O75914 559 aaPredicted RBP17.49■□□□□ 0.39
KDM2B-219ENST00000611216 SKAP1Q86WV1 359 aa17.49■□□□□ 0.39
KDM2B-219ENST00000611216 ROCK2O75116 1388 aaKnown RBP17.48■□□□□ 0.39
KDM2B-219ENST00000611216 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
KDM2B-219ENST00000611216 CDCA7LQ96GN5 454 aa17.47■□□□□ 0.39
KDM2B-219ENST00000611216 KIF15Q9NS87 1388 aa17.47■□□□□ 0.39
KDM2B-219ENST00000611216 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
KDM2B-219ENST00000611216 PLIN1O60240 522 aa17.47■□□□□ 0.39
KDM2B-219ENST00000611216 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
KDM2B-219ENST00000611216 EXOC6Q8TAG9 804 aa17.45■□□□□ 0.38
KDM2B-219ENST00000611216 CARMIL2Q6F5E8 1435 aa17.44■□□□□ 0.38
KDM2B-219ENST00000611216 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
KDM2B-219ENST00000611216 ERICH6BQ5W0A0 696 aa17.41■□□□□ 0.38
KDM2B-219ENST00000611216 ATP10BO94823 1461 aa17.4■□□□□ 0.38
KDM2B-219ENST00000611216 SMG6Q86US8 1419 aaKnown RBP17.4■□□□□ 0.38
KDM2B-219ENST00000611216 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
KDM2B-219ENST00000611216 MYT1LQ9UL68 1186 aa17.37■□□□□ 0.37
KDM2B-219ENST00000611216 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
KDM2B-219ENST00000611216 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
KDM2B-219ENST00000611216 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
KDM2B-219ENST00000611216 PANK3Q9H999 370 aa17.37■□□□□ 0.37
KDM2B-219ENST00000611216 NOP58Q9Y2X3 529 aaKnown RBP17.37■□□□□ 0.37
KDM2B-219ENST00000611216 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
KDM2B-219ENST00000611216 RCAN3Q9UKA8 241 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms