RNA–Protein interactions for RNA: ENST00000610481.1

MALAT1-204, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 353 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-204ENST00000610481 MYO5CQ9NQX4 1742 aa17.43■□□□□ 0.38
MALAT1-204ENST00000610481 YEATS2Q9ULM3 1422 aa17.42■□□□□ 0.38
MALAT1-204ENST00000610481 RICTORQ6R327 1708 aa17.41■□□□□ 0.38
MALAT1-204ENST00000610481 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
MALAT1-204ENST00000610481 ARID4BQ4LE39 1312 aaPredicted RBP17.41■□□□□ 0.38
MALAT1-204ENST00000610481 ZMYM4Q5VZL5 1548 aa17.41■□□□□ 0.38
MALAT1-204ENST00000610481 AFAP1Q8N556 730 aa17.4■□□□□ 0.38
MALAT1-204ENST00000610481 ARHGEF40Q8TER5 1519 aa17.4■□□□□ 0.38
MALAT1-204ENST00000610481 GPATCH8Q9UKJ3 1502 aaKnown RBP17.39■□□□□ 0.37
MALAT1-204ENST00000610481 ZNF777Q9ULD5 760 aaPredicted RBP17.39■□□□□ 0.37
MALAT1-204ENST00000610481 MAGI2Q86UL8 1455 aa17.38■□□□□ 0.37
MALAT1-204ENST00000610481 ZFYVE16Q7Z3T8 1539 aa17.38■□□□□ 0.37
MALAT1-204ENST00000610481 CCNB3Q8WWL7 1395 aa17.38■□□□□ 0.37
MALAT1-204ENST00000610481 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
MALAT1-204ENST00000610481 PREX2Q70Z35 1606 aa17.37■□□□□ 0.37
MALAT1-204ENST00000610481 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
MALAT1-204ENST00000610481 CFDP1Q9UEE9 299 aaPredicted RBP17.36■□□□□ 0.37
MALAT1-204ENST00000610481 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
MALAT1-204ENST00000610481 EHBP1L1Q8N3D4 1523 aa17.36■□□□□ 0.37
MALAT1-204ENST00000610481 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
MALAT1-204ENST00000610481 ABCC1P33527 1531 aa17.34■□□□□ 0.37
MALAT1-204ENST00000610481 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
MALAT1-204ENST00000610481 KDM5CP41229 1560 aa17.32■□□□□ 0.36
MALAT1-204ENST00000610481 CDC42BPAQ5VT25 1732 aa17.31■□□□□ 0.36
MALAT1-204ENST00000610481 HNRNPMP52272 730 aaKnown RBP eCLIP17.31■□□□□ 0.36
MALAT1-204ENST00000610481 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
MALAT1-204ENST00000610481 ATP10AO60312 1499 aa17.31■□□□□ 0.36
MALAT1-204ENST00000610481 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
MALAT1-204ENST00000610481 SAMD9LQ8IVG5 1584 aa17.29■□□□□ 0.36
MALAT1-204ENST00000610481 MLECQ14165 292 aa17.29■□□□□ 0.36
MALAT1-204ENST00000610481 NCOA2Q15596 1464 aa17.29■□□□□ 0.36
MALAT1-204ENST00000610481 MLH3Q9UHC1 1453 aa17.29■□□□□ 0.36
MALAT1-204ENST00000610481 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
MALAT1-204ENST00000610481 KANK4Q5T7N3 995 aaPredicted RBP17.28■□□□□ 0.36
MALAT1-204ENST00000610481 LRRC9Q6ZRR7 1453 aa17.28■□□□□ 0.36
MALAT1-204ENST00000610481 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
MALAT1-204ENST00000610481 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.36
MALAT1-204ENST00000610481 ADAMTSL3P82987 1691 aa17.26■□□□□ 0.35
MALAT1-204ENST00000610481 PTPRMP28827 1452 aa17.26■□□□□ 0.35
MALAT1-204ENST00000610481 PLEKHH2Q8IVE3 1493 aa17.26■□□□□ 0.35
MALAT1-204ENST00000610481 HECW2Q9P2P5 1572 aa17.26■□□□□ 0.35
MALAT1-204ENST00000610481 BCORL1Q5H9F3 1711 aa17.26■□□□□ 0.35
MALAT1-204ENST00000610481 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
MALAT1-204ENST00000610481 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
MALAT1-204ENST00000610481 SPAG9O60271 1321 aaKnown RBP17.24■□□□□ 0.35
MALAT1-204ENST00000610481 DIP2CQ9Y2E4 1556 aa17.23■□□□□ 0.35
MALAT1-204ENST00000610481 MAP3K1Q13233 1512 aa17.23■□□□□ 0.35
MALAT1-204ENST00000610481 MADDQ8WXG6 1647 aa17.23■□□□□ 0.35
MALAT1-204ENST00000610481 APLP2Q06481 763 aa17.22■□□□□ 0.35
MALAT1-204ENST00000610481 SUPT6HQ7KZ85 1726 aaKnown RBP17.21■□□□□ 0.35
MALAT1-204ENST00000610481 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
MALAT1-204ENST00000610481 MBD5Q9P267 1494 aa17.2■□□□□ 0.34
MALAT1-204ENST00000610481 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
MALAT1-204ENST00000610481 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
MALAT1-204ENST00000610481 CAMSAP2Q08AD1 1489 aa17.17■□□□□ 0.34
MALAT1-204ENST00000610481 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
MALAT1-204ENST00000610481 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
MALAT1-204ENST00000610481 RIMS1Q86UR5 1692 aaKnown RBP17.15■□□□□ 0.34
MALAT1-204ENST00000610481 AGLP35573 1532 aa17.14■□□□□ 0.33
MALAT1-204ENST00000610481 INO80Q9ULG1 1556 aaPredicted RBP17.13■□□□□ 0.33
MALAT1-204ENST00000610481 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
MALAT1-204ENST00000610481 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
MALAT1-204ENST00000610481 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
MALAT1-204ENST00000610481 CEBPAP49715 358 aaPredicted RBP17.11■□□□□ 0.33
MALAT1-204ENST00000610481 RTEL1-TNFRSF6BF6WH68 1400 aa17.11■□□□□ 0.33
MALAT1-204ENST00000610481 A2MP01023 1474 aa17.11■□□□□ 0.33
MALAT1-204ENST00000610481 MIA2Q96PC5 1412 aa17.1■□□□□ 0.33
MALAT1-204ENST00000610481 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
MALAT1-204ENST00000610481 FER1L4A9Z1Z3 1794 aa17.07■□□□□ 0.32
MALAT1-204ENST00000610481 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
MALAT1-204ENST00000610481 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
MALAT1-204ENST00000610481 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
MALAT1-204ENST00000610481 ARHGEF5Q12774 1597 aa17.06■□□□□ 0.32
MALAT1-204ENST00000610481 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
MALAT1-204ENST00000610481 DHX29Q7Z478 1369 aaKnown RBP17.05■□□□□ 0.32
MALAT1-204ENST00000610481 GGT6Q6P531 493 aa17.05■□□□□ 0.32
MALAT1-204ENST00000610481 CNTLNQ9NXG0 1405 aa17.03■□□□□ 0.32
MALAT1-204ENST00000610481 HSPA2P54652 639 aa17.02■□□□□ 0.32
MALAT1-204ENST00000610481 FGD6Q6ZV73 1430 aa17.02■□□□□ 0.31
MALAT1-204ENST00000610481 KIF3BO15066 747 aa17■□□□□ 0.31
MALAT1-204ENST00000610481 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
MALAT1-204ENST00000610481 ADGBQ8N7X0 1667 aa16.98■□□□□ 0.31
MALAT1-204ENST00000610481 ABCC5O15440 1437 aa16.98■□□□□ 0.31
MALAT1-204ENST00000610481 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
MALAT1-204ENST00000610481 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
MALAT1-204ENST00000610481 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
MALAT1-204ENST00000610481 MAST1Q9Y2H9 1570 aa16.96■□□□□ 0.31
MALAT1-204ENST00000610481 DAPK1P53355 1430 aa16.95■□□□□ 0.3
MALAT1-204ENST00000610481 UHRF1BP1Q6BDS2 1440 aa16.95■□□□□ 0.3
MALAT1-204ENST00000610481 FAM50AQ14320 339 aaKnown RBP16.94■□□□□ 0.3
MALAT1-204ENST00000610481 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
MALAT1-204ENST00000610481 C3P01024 1663 aa16.93■□□□□ 0.3
MALAT1-204ENST00000610481 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
MALAT1-204ENST00000610481 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
MALAT1-204ENST00000610481 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
MALAT1-204ENST00000610481 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
MALAT1-204ENST00000610481 NPATQ14207 1427 aa16.91■□□□□ 0.3
MALAT1-204ENST00000610481 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
MALAT1-204ENST00000610481 PTPRKQ15262 1439 aa16.89■□□□□ 0.29
MALAT1-204ENST00000610481 CLTCQ00610 1675 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms