RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 POGZQ7Z3K3 1410 aa35.67■■■■□ 3.3
TMEM248-207ENST00000607045 PLPPR3Q6T4P5 718 aa35.67■■■■□ 3.3
TMEM248-207ENST00000607045 KIF14Q15058 1648 aa35.67■■■■□ 3.3
TMEM248-207ENST00000607045 ZFYVE16Q7Z3T8 1539 aa35.67■■■■□ 3.3
TMEM248-207ENST00000607045 MAGI2Q86UL8 1455 aa35.67■■■■□ 3.3
TMEM248-207ENST00000607045 AFAP1Q8N556 730 aa35.64■■■■□ 3.3
TMEM248-207ENST00000607045 CLIP1P30622 1438 aa35.6■■■■□ 3.29
TMEM248-207ENST00000607045 CASKIN1Q8WXD9 1431 aa35.6■■■■□ 3.29
TMEM248-207ENST00000607045 LRRIQ1Q96JM4 1722 aa35.6■■■■□ 3.29
TMEM248-207ENST00000607045 SIGLEC1Q9BZZ2 1709 aa35.59■■■■□ 3.29
TMEM248-207ENST00000607045 MYO5CQ9NQX4 1742 aa35.57■■■■□ 3.28
TMEM248-207ENST00000607045 ARHGAP5Q13017 1502 aa35.55■■■■□ 3.28
TMEM248-207ENST00000607045 ATP10AO60312 1499 aa35.54■■■■□ 3.28
TMEM248-207ENST00000607045 RIMS1Q86UR5 1692 aaKnown RBP35.54■■■■□ 3.28
TMEM248-207ENST00000607045 MYT1LQ9UL68 1186 aa35.51■■■■□ 3.28
TMEM248-207ENST00000607045 PCF11O94913 1555 aaKnown RBP35.5■■■■□ 3.27
TMEM248-207ENST00000607045 HSPA2P54652 639 aa35.48■■■■□ 3.27
TMEM248-207ENST00000607045 LMTK3Q96Q04 1460 aa35.48■■■■□ 3.27
TMEM248-207ENST00000607045 CCDC18Q5T9S5 1454 aa35.47■■■■□ 3.27
TMEM248-207ENST00000607045 ZNF518AQ6AHZ1 1483 aa35.46■■■■□ 3.27
TMEM248-207ENST00000607045 C9orf84Q5VXU9 1444 aa35.45■■■■□ 3.27
TMEM248-207ENST00000607045 CEBPAP49715 358 aaPredicted RBP35.41■■■■□ 3.26
TMEM248-207ENST00000607045 CDC42BPBQ9Y5S2 1711 aa35.4■■■■□ 3.26
TMEM248-207ENST00000607045 ARHGEF12Q9NZN5 1544 aa35.4■■■■□ 3.26
TMEM248-207ENST00000607045 TRAPPC8Q9Y2L5 1435 aa35.4■■■■□ 3.26
TMEM248-207ENST00000607045 FYCO1Q9BQS8 1478 aa35.37■■■■□ 3.25
TMEM248-207ENST00000607045 ZNF777Q9ULD5 760 aaPredicted RBP35.37■■■■□ 3.25
TMEM248-207ENST00000607045 KDM5CP41229 1560 aa35.36■■■■□ 3.25
TMEM248-207ENST00000607045 MLH3Q9UHC1 1453 aa35.31■■■■□ 3.24
TMEM248-207ENST00000607045 PREX2Q70Z35 1606 aa35.29■■■■□ 3.24
TMEM248-207ENST00000607045 FER1L4A9Z1Z3 1794 aa35.29■■■■□ 3.24
TMEM248-207ENST00000607045 HNRNPMP52272 730 aaKnown RBP eCLIP35.27■■■■□ 3.241e-6■■■■■ 30.8
TMEM248-207ENST00000607045 ABCC1P33527 1531 aa35.27■■■■□ 3.24
TMEM248-207ENST00000607045 DIP2CQ9Y2E4 1556 aa35.26■■■■□ 3.24
TMEM248-207ENST00000607045 FBXO41Q8TF61 875 aa35.26■■■■□ 3.24
TMEM248-207ENST00000607045 GPATCH8Q9UKJ3 1502 aaKnown RBP35.25■■■■□ 3.23
TMEM248-207ENST00000607045 CDC42BPAQ5VT25 1732 aa35.22■■■■□ 3.23
TMEM248-207ENST00000607045 CFDP1Q9UEE9 299 aaPredicted RBP35.2■■■■□ 3.23
TMEM248-207ENST00000607045 ABCA6Q8N139 1617 aa35.2■■■■□ 3.23
TMEM248-207ENST00000607045 ITSN2Q9NZM3 1697 aa35.17■■■■□ 3.22
TMEM248-207ENST00000607045 REREQ9P2R6 1566 aa35.15■■■■□ 3.22
TMEM248-207ENST00000607045 MTUS2Q5JR59 1369 aa35.14■■■■□ 3.22
TMEM248-207ENST00000607045 CCNB3Q8WWL7 1395 aa35.14■■■■□ 3.22
TMEM248-207ENST00000607045 SPAG9O60271 1321 aaKnown RBP35.14■■■■□ 3.22
TMEM248-207ENST00000607045 ESF1Q9H501 851 aaKnown RBP35.13■■■■□ 3.21
TMEM248-207ENST00000607045 SAMD9LQ8IVG5 1584 aa35.13■■■■□ 3.21
TMEM248-207ENST00000607045 KIDINS220Q9ULH0 1771 aa35.12■■■■□ 3.21
TMEM248-207ENST00000607045 AGLP35573 1532 aa35.11■■■■□ 3.21
TMEM248-207ENST00000607045 ZNF644Q9H582 1327 aaPredicted RBP35.08■■■■□ 3.21
TMEM248-207ENST00000607045 SYCP2Q9BX26 1530 aa35.08■■■■□ 3.21
TMEM248-207ENST00000607045 KIAA1107Q9UPP5 1409 aa35.06■■■■□ 3.2
TMEM248-207ENST00000607045 CEP162Q5TB80 1403 aa35.06■■■■□ 3.2
TMEM248-207ENST00000607045 LOC105371045A0A1W2PR82 267 aa35.02■■■■□ 3.2
TMEM248-207ENST00000607045 SETD1BQ9UPS6 1966 aaKnown RBP35■■■■□ 3.19
TMEM248-207ENST00000607045 UHRF1BP1Q6BDS2 1440 aa35■■■■□ 3.19
TMEM248-207ENST00000607045 PREX1Q8TCU6 1659 aa34.99■■■■□ 3.19
TMEM248-207ENST00000607045 PLEKHH2Q8IVE3 1493 aa34.98■■■■□ 3.19
TMEM248-207ENST00000607045 CERKQ8TCT0 537 aa34.98■■■■□ 3.19
TMEM248-207ENST00000607045 C3P01024 1663 aa34.94■■■■□ 3.18
TMEM248-207ENST00000607045 DMRT2Q9Y5R5 561 aa34.92■■■■□ 3.18
TMEM248-207ENST00000607045 ATP7AQ04656 1500 aa34.91■■■■□ 3.18
TMEM248-207ENST00000607045 CNTLNQ9NXG0 1405 aa34.91■■■■□ 3.18
TMEM248-207ENST00000607045 ZMYM3Q14202 1370 aa34.91■■■■□ 3.18
TMEM248-207ENST00000607045 GGT6Q6P531 493 aa34.91■■■■□ 3.18
TMEM248-207ENST00000607045 A2MP01023 1474 aa34.89■■■■□ 3.18
TMEM248-207ENST00000607045 MBD5Q9P267 1494 aa34.89■■■■□ 3.18
TMEM248-207ENST00000607045 TIAM1Q13009 1591 aa34.88■■■■□ 3.17
TMEM248-207ENST00000607045 EHBP1L1Q8N3D4 1523 aa34.87■■■■□ 3.17
TMEM248-207ENST00000607045 SUPT6HQ7KZ85 1726 aaKnown RBP34.86■■■■□ 3.17
TMEM248-207ENST00000607045 STRCQ7RTU9 1775 aa34.85■■■■□ 3.17
TMEM248-207ENST00000607045 INO80Q9ULG1 1556 aaPredicted RBP34.83■■■■□ 3.17
TMEM248-207ENST00000607045 NCOA2Q15596 1464 aa34.78■■■■□ 3.16
TMEM248-207ENST00000607045 PLXNC1O60486 1568 aa34.78■■■■□ 3.16
TMEM248-207ENST00000607045 NPATQ14207 1427 aa34.75■■■■□ 3.15
TMEM248-207ENST00000607045 RTEL1-TNFRSF6BF6WH68 1400 aa34.74■■■■□ 3.15
TMEM248-207ENST00000607045 PPP6R1Q9UPN7 881 aa34.74■■■■□ 3.15
TMEM248-207ENST00000607045 DHX29Q7Z478 1369 aaKnown RBP34.74■■■■□ 3.15
TMEM248-207ENST00000607045 PTPRTO14522 1441 aa34.72■■■■□ 3.15
TMEM248-207ENST00000607045 RSPH4AQ5TD94 716 aa34.7■■■■□ 3.15
TMEM248-207ENST00000607045 KIF3BO15066 747 aa34.69■■■■□ 3.14
TMEM248-207ENST00000607045 KANK4Q5T7N3 995 aaPredicted RBP34.69■■■■□ 3.14
TMEM248-207ENST00000607045 MROH2AA6NES4 1674 aa34.69■■■■□ 3.14
TMEM248-207ENST00000607045 CLTCQ00610 1675 aaKnown RBP34.69■■■■□ 3.14
TMEM248-207ENST00000607045 PTPRKQ15262 1439 aa34.68■■■■□ 3.14
TMEM248-207ENST00000607045 NCOA1Q15788 1441 aa34.67■■■■□ 3.14
TMEM248-207ENST00000607045 VPS8Q8N3P4 1428 aa34.67■■■■□ 3.14
TMEM248-207ENST00000607045 NCKAP5LQ9HCH0 1330 aa34.67■■■■□ 3.14
TMEM248-207ENST00000607045 CAMSAP2Q08AD1 1489 aa34.65■■■■□ 3.14
TMEM248-207ENST00000607045 ADGBQ8N7X0 1667 aa34.64■■■■□ 3.14
TMEM248-207ENST00000607045 CCDC141Q6ZP82 1450 aa34.64■■■■□ 3.14
TMEM248-207ENST00000607045 TSPY4P0CV99 314 aa34.62■■■■□ 3.13
TMEM248-207ENST00000607045 TSPY10P0CW01 314 aa34.62■■■■□ 3.13
TMEM248-207ENST00000607045 LRRC9Q6ZRR7 1453 aa34.62■■■■□ 3.13
TMEM248-207ENST00000607045 CAMSAP1Q5T5Y3 1602 aa34.6■■■■□ 3.13
TMEM248-207ENST00000607045 FBXO31Q5XUX0 539 aaPredicted RBP34.6■■■■□ 3.13
TMEM248-207ENST00000607045 WASHC2CQ9Y4E1 1318 aa34.54■■■■□ 3.12
TMEM248-207ENST00000607045 PKD2Q13563 968 aa34.51■■■■□ 3.12
TMEM248-207ENST00000607045 LTBP4Q8N2S1 1624 aa34.5■■■■□ 3.11
TMEM248-207ENST00000607045 ARHGEF5Q12774 1597 aa34.47■■■■□ 3.11
TMEM248-207ENST00000607045 MYO3AQ8NEV4 1616 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms