RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CAMSAP2Q08AD1 1489 aa25.17■■□□□ 1.62
PMF1-206ENST00000606952 MAP3K4Q9Y6R4 1608 aa25.17■■□□□ 1.62
PMF1-206ENST00000606952 KCNH8Q96L42 1107 aa25.16■■□□□ 1.62
PMF1-206ENST00000606952 SAMD9LQ8IVG5 1584 aa25.15■■□□□ 1.62
PMF1-206ENST00000606952 PCGF6Q9BYE7 350 aa25.14■■□□□ 1.62
PMF1-206ENST00000606952 DNMT1P26358 1616 aaKnown RBP25.13■■□□□ 1.61
PMF1-206ENST00000606952 CFDP1Q9UEE9 299 aaPredicted RBP25.13■■□□□ 1.61
PMF1-206ENST00000606952 ARHGAP5Q13017 1502 aa25.12■■□□□ 1.61
PMF1-206ENST00000606952 ARHGEF5Q12774 1597 aa25.1■■□□□ 1.61
PMF1-206ENST00000606952 CFAP74Q9C0B2 1584 aa25.1■■□□□ 1.61
PMF1-206ENST00000606952 PLEKHH2Q8IVE3 1493 aa25.1■■□□□ 1.61
PMF1-206ENST00000606952 KIF13AQ9H1H9 1805 aa25.09■■□□□ 1.61
PMF1-206ENST00000606952 CROCC2H7BZ55 1655 aa25.08■■□□□ 1.61
PMF1-206ENST00000606952 ABCC1P33527 1531 aa25.07■■□□□ 1.6
PMF1-206ENST00000606952 KIAA1107Q9UPP5 1409 aa25.07■■□□□ 1.6
PMF1-206ENST00000606952 CD109Q6YHK3 1445 aa25.06■■□□□ 1.6
PMF1-206ENST00000606952 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
PMF1-206ENST00000606952 MBD5Q9P267 1494 aa25.04■■□□□ 1.6
PMF1-206ENST00000606952 DAPK1P53355 1430 aa25.03■■□□□ 1.6
PMF1-206ENST00000606952 FANCAO15360 1455 aa25.02■■□□□ 1.6
PMF1-206ENST00000606952 EFCAB2Q5VUJ9 269 aa25.02■■□□□ 1.6
PMF1-206ENST00000606952 ZNF644Q9H582 1327 aaPredicted RBP25.02■■□□□ 1.6
PMF1-206ENST00000606952 ABCC5O15440 1437 aa25.02■■□□□ 1.6
PMF1-206ENST00000606952 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
PMF1-206ENST00000606952 PPRC1Q5VV67 1664 aaKnown RBP25.01■■□□□ 1.59
PMF1-206ENST00000606952 SYCP2Q9BX26 1530 aa25.01■■□□□ 1.59
PMF1-206ENST00000606952 PTPRKQ15262 1439 aa25■■□□□ 1.59
PMF1-206ENST00000606952 AKNAQ7Z591 1439 aa25■■□□□ 1.59
PMF1-206ENST00000606952 NEO1Q92859 1461 aa25■■□□□ 1.59
PMF1-206ENST00000606952 ADGBQ8N7X0 1667 aa24.97■■□□□ 1.59
PMF1-206ENST00000606952 MAST1Q9Y2H9 1570 aa24.97■■□□□ 1.59
PMF1-206ENST00000606952 ARHGEF12Q9NZN5 1544 aa24.97■■□□□ 1.59
PMF1-206ENST00000606952 CCDC141Q6ZP82 1450 aa24.97■■□□□ 1.59
PMF1-206ENST00000606952 ADGRL2O95490 1459 aa24.96■■□□□ 1.59
PMF1-206ENST00000606952 RSPH4AQ5TD94 716 aa24.95■■□□□ 1.58
PMF1-206ENST00000606952 ZNF777Q9ULD5 760 aaPredicted RBP24.94■■□□□ 1.58
PMF1-206ENST00000606952 ROCK1Q13464 1354 aa24.93■■□□□ 1.58
PMF1-206ENST00000606952 GCC2Q8IWJ2 1684 aa24.93■■□□□ 1.58
PMF1-206ENST00000606952 FAM69CQ0P6D2 419 aa24.92■■□□□ 1.58
PMF1-206ENST00000606952 ADGRL1O94910 1474 aa24.91■■□□□ 1.58
PMF1-206ENST00000606952 TEX14Q8IWB6 1497 aa24.91■■□□□ 1.58
PMF1-206ENST00000606952 TSPOAP1O95153 1857 aa24.91■■□□□ 1.58
PMF1-206ENST00000606952 HFM1A2PYH4 1435 aa24.9■■□□□ 1.58
PMF1-206ENST00000606952 PLXNC1O60486 1568 aa24.86■■□□□ 1.57
PMF1-206ENST00000606952 C9orf84Q5VXU9 1444 aa24.86■■□□□ 1.57
PMF1-206ENST00000606952 KDM5CP41229 1560 aa24.85■■□□□ 1.57
PMF1-206ENST00000606952 HNRNPMP52272 730 aaKnown RBP eCLIP24.85■■□□□ 1.57
PMF1-206ENST00000606952 TRAPPC8Q9Y2L5 1435 aa24.85■■□□□ 1.57
PMF1-206ENST00000606952 ITGAEP38570 1179 aa24.84■■□□□ 1.57
PMF1-206ENST00000606952 SCAPERQ9BY12 1400 aa24.84■■□□□ 1.57
PMF1-206ENST00000606952 NAIPQ13075 1403 aa24.83■■□□□ 1.57
PMF1-206ENST00000606952 POGZQ7Z3K3 1410 aa24.83■■□□□ 1.57
PMF1-206ENST00000606952 INO80Q9ULG1 1556 aaPredicted RBP24.83■■□□□ 1.57
PMF1-206ENST00000606952 RTEL1-TNFRSF6BF6WH68 1400 aa24.82■■□□□ 1.56
PMF1-206ENST00000606952 NCOA1Q15788 1441 aa24.82■■□□□ 1.56
PMF1-206ENST00000606952 RICTORQ6R327 1708 aa24.82■■□□□ 1.56
PMF1-206ENST00000606952 ZNF518AQ6AHZ1 1483 aa24.82■■□□□ 1.56
PMF1-206ENST00000606952 SETD5Q9C0A6 1442 aa24.81■■□□□ 1.56
PMF1-206ENST00000606952 ZFYVE16Q7Z3T8 1539 aa24.81■■□□□ 1.56
PMF1-206ENST00000606952 ANKRD30AQ9BXX3 1397 aa24.79■■□□□ 1.56
PMF1-206ENST00000606952 HRCP23327 699 aa24.78■■□□□ 1.56
PMF1-206ENST00000606952 DENND4BO75064 1496 aaPredicted RBP24.77■■□□□ 1.56
PMF1-206ENST00000606952 FRMPD1Q5SYB0 1578 aa24.77■■□□□ 1.56
PMF1-206ENST00000606952 TSPY4P0CV99 314 aa24.77■■□□□ 1.56
PMF1-206ENST00000606952 TSPY10P0CW01 314 aa24.77■■□□□ 1.56
PMF1-206ENST00000606952 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
PMF1-206ENST00000606952 ATP7AQ04656 1500 aa24.75■■□□□ 1.55
PMF1-206ENST00000606952 ZMYM4Q5VZL5 1548 aa24.75■■□□□ 1.55
PMF1-206ENST00000606952 MLH3Q9UHC1 1453 aa24.74■■□□□ 1.55
PMF1-206ENST00000606952 KIDINS220Q9ULH0 1771 aa24.73■■□□□ 1.55
PMF1-206ENST00000606952 HECW2Q9P2P5 1572 aa24.73■■□□□ 1.55
PMF1-206ENST00000606952 RAB3GAP2Q9H2M9 1393 aa24.73■■□□□ 1.55
PMF1-206ENST00000606952 CHIC2Q9UKJ5 165 aa24.72■■□□□ 1.55
PMF1-206ENST00000606952 DUOX2Q9NRD8 1548 aa24.69■■□□□ 1.54
PMF1-206ENST00000606952 KDM6BO15054 1643 aa24.68■■□□□ 1.54
PMF1-206ENST00000606952 KIF15Q9NS87 1388 aa24.68■■□□□ 1.54
PMF1-206ENST00000606952 SPAG9O60271 1321 aaKnown RBP24.68■■□□□ 1.54
PMF1-206ENST00000606952 AFAP1Q8N556 730 aa24.68■■□□□ 1.54
PMF1-206ENST00000606952 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
PMF1-206ENST00000606952 RRP7BPQ9NSQ0 103 aa24.66■■□□□ 1.54
PMF1-206ENST00000606952 MAGI2Q86UL8 1455 aa24.64■■□□□ 1.54
PMF1-206ENST00000606952 ERBINQ96RT1 1412 aa24.64■■□□□ 1.54
PMF1-206ENST00000606952 ANKRD50Q9ULJ7 1429 aa24.64■■□□□ 1.54
PMF1-206ENST00000606952 ABCA6Q8N139 1617 aa24.61■■□□□ 1.53
PMF1-206ENST00000606952 EIF2AK4Q9P2K8 1649 aaKnown RBP24.61■■□□□ 1.53
PMF1-206ENST00000606952 COL17A1Q9UMD9 1497 aaPredicted RBP24.61■■□□□ 1.53
PMF1-206ENST00000606952 BCORL1Q5H9F3 1711 aa24.6■■□□□ 1.53
PMF1-206ENST00000606952 DIP2CQ9Y2E4 1556 aa24.59■■□□□ 1.53
PMF1-206ENST00000606952 UNC13BO14795 1591 aa24.59■■□□□ 1.53
PMF1-206ENST00000606952 KDM5DQ9BY66 1539 aa24.58■■□□□ 1.53
PMF1-206ENST00000606952 REREQ9P2R6 1566 aa24.56■■□□□ 1.52
PMF1-206ENST00000606952 RAPGEF3O95398 923 aa24.56■■□□□ 1.52
PMF1-206ENST00000606952 DEPDC5O75140 1603 aa24.55■■□□□ 1.52
PMF1-206ENST00000606952 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
PMF1-206ENST00000606952 ARHGEF40Q8TER5 1519 aa24.53■■□□□ 1.52
PMF1-206ENST00000606952 DHX29Q7Z478 1369 aaKnown RBP24.53■■□□□ 1.52
PMF1-206ENST00000606952 A2MP01023 1474 aa24.52■■□□□ 1.52
PMF1-206ENST00000606952 RNF17Q9BXT8 1623 aaKnown RBP24.5■■□□□ 1.51
PMF1-206ENST00000606952 YEATS2Q9ULM3 1422 aa24.49■■□□□ 1.51
PMF1-206ENST00000606952 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms