RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
CTSA-213ENST00000606782 BCORL1Q5H9F3 1711 aa21.66■■□□□ 1.06
CTSA-213ENST00000606782 FYCO1Q9BQS8 1478 aa21.66■■□□□ 1.06
CTSA-213ENST00000606782 PTPRMP28827 1452 aa21.64■■□□□ 1.06
CTSA-213ENST00000606782 HECW2Q9P2P5 1572 aa21.64■■□□□ 1.05
CTSA-213ENST00000606782 ZFYVE16Q7Z3T8 1539 aa21.64■■□□□ 1.05
CTSA-213ENST00000606782 YEATS2Q9ULM3 1422 aa21.63■■□□□ 1.05
CTSA-213ENST00000606782 ARID4BQ4LE39 1312 aaPredicted RBP21.63■■□□□ 1.05
CTSA-213ENST00000606782 ARHGAP5Q13017 1502 aa21.6■■□□□ 1.05
CTSA-213ENST00000606782 MADDQ8WXG6 1647 aa21.58■■□□□ 1.04
CTSA-213ENST00000606782 ZNF518AQ6AHZ1 1483 aa21.58■■□□□ 1.04
CTSA-213ENST00000606782 CDC42BPBQ9Y5S2 1711 aa21.58■■□□□ 1.04
CTSA-213ENST00000606782 ATP10AO60312 1499 aa21.57■■□□□ 1.04
CTSA-213ENST00000606782 KDM5CP41229 1560 aa21.56■■□□□ 1.04
CTSA-213ENST00000606782 PREX2Q70Z35 1606 aa21.55■■□□□ 1.04
CTSA-213ENST00000606782 SIGLEC1Q9BZZ2 1709 aa21.55■■□□□ 1.04
CTSA-213ENST00000606782 AFAP1Q8N556 730 aa21.54■■□□□ 1.04
CTSA-213ENST00000606782 C9orf84Q5VXU9 1444 aa21.52■■□□□ 1.04
CTSA-213ENST00000606782 MLH3Q9UHC1 1453 aa21.5■■□□□ 1.03
CTSA-213ENST00000606782 ABCC1P33527 1531 aa21.5■■□□□ 1.03
CTSA-213ENST00000606782 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
CTSA-213ENST00000606782 CDC42BPAQ5VT25 1732 aa21.49■■□□□ 1.03
CTSA-213ENST00000606782 RIMS1Q86UR5 1692 aaKnown RBP21.48■■□□□ 1.03
CTSA-213ENST00000606782 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
CTSA-213ENST00000606782 TRAPPC8Q9Y2L5 1435 aa21.47■■□□□ 1.03
CTSA-213ENST00000606782 GPATCH8Q9UKJ3 1502 aaKnown RBP21.47■■□□□ 1.03
CTSA-213ENST00000606782 REREQ9P2R6 1566 aa21.45■■□□□ 1.02
CTSA-213ENST00000606782 DIP2CQ9Y2E4 1556 aa21.44■■□□□ 1.02
CTSA-213ENST00000606782 ITSN2Q9NZM3 1697 aa21.44■■□□□ 1.02
CTSA-213ENST00000606782 MLECQ14165 292 aa21.42■■□□□ 1.02
CTSA-213ENST00000606782 LMTK3Q96Q04 1460 aa21.41■■□□□ 1.02
CTSA-213ENST00000606782 MTUS2Q5JR59 1369 aa21.41■■□□□ 1.02
CTSA-213ENST00000606782 SAMD9LQ8IVG5 1584 aa21.4■■□□□ 1.02
CTSA-213ENST00000606782 KIAA1107Q9UPP5 1409 aa21.4■■□□□ 1.02
CTSA-213ENST00000606782 FER1L4A9Z1Z3 1794 aa21.39■■□□□ 1.01
CTSA-213ENST00000606782 ABCA6Q8N139 1617 aa21.39■■□□□ 1.01
CTSA-213ENST00000606782 AGLP35573 1532 aa21.39■■□□□ 1.01
CTSA-213ENST00000606782 CCNB3Q8WWL7 1395 aa21.38■■□□□ 1.01
CTSA-213ENST00000606782 CFDP1Q9UEE9 299 aaPredicted RBP21.38■■□□□ 1.01
CTSA-213ENST00000606782 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
CTSA-213ENST00000606782 ZNF777Q9ULD5 760 aaPredicted RBP21.37■■□□□ 1.01
CTSA-213ENST00000606782 KIDINS220Q9ULH0 1771 aa21.37■■□□□ 1.01
CTSA-213ENST00000606782 PLEKHH2Q8IVE3 1493 aa21.37■■□□□ 1.01
CTSA-213ENST00000606782 EHBP1L1Q8N3D4 1523 aa21.35■■□□□ 1.01
CTSA-213ENST00000606782 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
CTSA-213ENST00000606782 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.01
CTSA-213ENST00000606782 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
CTSA-213ENST00000606782 SPAG9O60271 1321 aaKnown RBP21.31■■□□□ 1
CTSA-213ENST00000606782 TIAM1Q13009 1591 aa21.31■■□□□ 1
CTSA-213ENST00000606782 ILDR1Q86SU0 546 aaPredicted RBP21.3■■□□□ 1
CTSA-213ENST00000606782 CEBPAP49715 358 aaPredicted RBP21.27■■□□□ 1
CTSA-213ENST00000606782 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
CTSA-213ENST00000606782 VPS8Q8N3P4 1428 aa21.27■■□□□ 1
CTSA-213ENST00000606782 SETD1BQ9UPS6 1966 aaKnown RBP21.27■□□□□ 0.99
CTSA-213ENST00000606782 MBD5Q9P267 1494 aa21.26■□□□□ 0.99
CTSA-213ENST00000606782 ATP7AQ04656 1500 aa21.26■□□□□ 0.99
CTSA-213ENST00000606782 ZNF644Q9H582 1327 aaPredicted RBP21.26■□□□□ 0.99
CTSA-213ENST00000606782 HSPA2P54652 639 aa21.25■□□□□ 0.99
CTSA-213ENST00000606782 INO80Q9ULG1 1556 aaPredicted RBP21.25■□□□□ 0.99
CTSA-213ENST00000606782 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
CTSA-213ENST00000606782 CNTLNQ9NXG0 1405 aa21.23■□□□□ 0.99
CTSA-213ENST00000606782 PLXNC1O60486 1568 aa21.22■□□□□ 0.99
CTSA-213ENST00000606782 PREX1Q8TCU6 1659 aa21.21■□□□□ 0.99
CTSA-213ENST00000606782 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
CTSA-213ENST00000606782 RTEL1-TNFRSF6BF6WH68 1400 aa21.21■□□□□ 0.99
CTSA-213ENST00000606782 A2MP01023 1474 aa21.2■□□□□ 0.98
CTSA-213ENST00000606782 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
CTSA-213ENST00000606782 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
CTSA-213ENST00000606782 C3P01024 1663 aa21.19■□□□□ 0.98
CTSA-213ENST00000606782 RSPH4AQ5TD94 716 aa21.19■□□□□ 0.98
CTSA-213ENST00000606782 LRRC9Q6ZRR7 1453 aa21.18■□□□□ 0.98
CTSA-213ENST00000606782 UHRF1BP1Q6BDS2 1440 aa21.15■□□□□ 0.98
CTSA-213ENST00000606782 PPP6R1Q9UPN7 881 aa21.15■□□□□ 0.98
CTSA-213ENST00000606782 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
CTSA-213ENST00000606782 CAMSAP2Q08AD1 1489 aa21.14■□□□□ 0.98
CTSA-213ENST00000606782 MROH2AA6NES4 1674 aa21.14■□□□□ 0.97
CTSA-213ENST00000606782 ZMYM3Q14202 1370 aa21.13■□□□□ 0.97
CTSA-213ENST00000606782 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
CTSA-213ENST00000606782 NPATQ14207 1427 aa21.12■□□□□ 0.97
CTSA-213ENST00000606782 DHX29Q7Z478 1369 aaKnown RBP21.11■□□□□ 0.97
CTSA-213ENST00000606782 FBXO41Q8TF61 875 aa21.11■□□□□ 0.97
CTSA-213ENST00000606782 KANK4Q5T7N3 995 aaPredicted RBP21.1■□□□□ 0.97
CTSA-213ENST00000606782 ARHGEF5Q12774 1597 aa21.1■□□□□ 0.97
CTSA-213ENST00000606782 GGT6Q6P531 493 aa21.07■□□□□ 0.96
CTSA-213ENST00000606782 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
CTSA-213ENST00000606782 STRCQ7RTU9 1775 aa21.07■□□□□ 0.96
CTSA-213ENST00000606782 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
CTSA-213ENST00000606782 CLTCQ00610 1675 aaKnown RBP21.04■□□□□ 0.96
CTSA-213ENST00000606782 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
CTSA-213ENST00000606782 TSPY4P0CV99 314 aa21.03■□□□□ 0.96
CTSA-213ENST00000606782 TSPY10P0CW01 314 aa21.03■□□□□ 0.96
CTSA-213ENST00000606782 MYOM3Q5VTT5 1437 aa21.03■□□□□ 0.96
CTSA-213ENST00000606782 PTPRTO14522 1441 aa21.01■□□□□ 0.95
CTSA-213ENST00000606782 FAM135AQ9P2D6 1515 aa21■□□□□ 0.95
CTSA-213ENST00000606782 KIF3BO15066 747 aa21■□□□□ 0.95
CTSA-213ENST00000606782 MAST1Q9Y2H9 1570 aa20.99■□□□□ 0.95
CTSA-213ENST00000606782 NCOA1Q15788 1441 aa20.99■□□□□ 0.95
CTSA-213ENST00000606782 CERKQ8TCT0 537 aa20.98■□□□□ 0.95
CTSA-213ENST00000606782 APLP2Q06481 763 aa20.95■□□□□ 0.94
CTSA-213ENST00000606782 ZNF142P52746 1687 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms