RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 MTUS2Q5JR59 1369 aa22.92■■□□□ 1.26
TUBE1-204ENST00000603621 SCAPERQ9BY12 1400 aa22.91■■□□□ 1.26
TUBE1-204ENST00000603621 CDC42BPAQ5VT25 1732 aa22.91■■□□□ 1.26
TUBE1-204ENST00000603621 PREX2Q70Z35 1606 aa22.9■■□□□ 1.26
TUBE1-204ENST00000603621 VPS8Q8N3P4 1428 aa22.89■■□□□ 1.25
TUBE1-204ENST00000603621 ZNF777Q9ULD5 760 aaPredicted RBP22.84■■□□□ 1.25
TUBE1-204ENST00000603621 POGZQ7Z3K3 1410 aa22.83■■□□□ 1.25
TUBE1-204ENST00000603621 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
TUBE1-204ENST00000603621 CCNB3Q8WWL7 1395 aa22.81■■□□□ 1.24
TUBE1-204ENST00000603621 GPATCH8Q9UKJ3 1502 aaKnown RBP22.81■■□□□ 1.24
TUBE1-204ENST00000603621 ARID4BQ4LE39 1312 aaPredicted RBP22.81■■□□□ 1.24
TUBE1-204ENST00000603621 TIAM1Q13009 1591 aa22.8■■□□□ 1.24
TUBE1-204ENST00000603621 ZMYM4Q5VZL5 1548 aa22.8■■□□□ 1.24
TUBE1-204ENST00000603621 ZFYVE16Q7Z3T8 1539 aa22.79■■□□□ 1.24
TUBE1-204ENST00000603621 ARHGEF40Q8TER5 1519 aa22.79■■□□□ 1.24
TUBE1-204ENST00000603621 AFAP1Q8N556 730 aa22.79■■□□□ 1.24
TUBE1-204ENST00000603621 MYT1LQ9UL68 1186 aa22.79■■□□□ 1.24
TUBE1-204ENST00000603621 YEATS2Q9ULM3 1422 aa22.78■■□□□ 1.24
TUBE1-204ENST00000603621 CFDP1Q9UEE9 299 aaPredicted RBP22.77■■□□□ 1.24
TUBE1-204ENST00000603621 ITSN2Q9NZM3 1697 aa22.77■■□□□ 1.24
TUBE1-204ENST00000603621 ABCC1P33527 1531 aa22.77■■□□□ 1.24
TUBE1-204ENST00000603621 ZNF518AQ6AHZ1 1483 aa22.76■■□□□ 1.23
TUBE1-204ENST00000603621 SUPT6HQ7KZ85 1726 aaKnown RBP22.75■■□□□ 1.23
TUBE1-204ENST00000603621 ARHGEF12Q9NZN5 1544 aa22.75■■□□□ 1.23
TUBE1-204ENST00000603621 SAMD9LQ8IVG5 1584 aa22.75■■□□□ 1.23
TUBE1-204ENST00000603621 MAGI2Q86UL8 1455 aa22.74■■□□□ 1.23
TUBE1-204ENST00000603621 TRAPPC8Q9Y2L5 1435 aa22.73■■□□□ 1.23
TUBE1-204ENST00000603621 NCOA2Q15596 1464 aa22.71■■□□□ 1.23
TUBE1-204ENST00000603621 KDM5CP41229 1560 aa22.71■■□□□ 1.23
TUBE1-204ENST00000603621 HNRNPMP52272 730 aaKnown RBP eCLIP22.7■■□□□ 1.22
TUBE1-204ENST00000603621 APLP2Q06481 763 aa22.7■■□□□ 1.22
TUBE1-204ENST00000603621 LRRC9Q6ZRR7 1453 aa22.7■■□□□ 1.22
TUBE1-204ENST00000603621 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.22
TUBE1-204ENST00000603621 BCORL1Q5H9F3 1711 aa22.69■■□□□ 1.22
TUBE1-204ENST00000603621 KANK4Q5T7N3 995 aaPredicted RBP22.69■■□□□ 1.22
TUBE1-204ENST00000603621 SIGLEC1Q9BZZ2 1709 aa22.68■■□□□ 1.22
TUBE1-204ENST00000603621 HECW2Q9P2P5 1572 aa22.68■■□□□ 1.22
TUBE1-204ENST00000603621 MAP3K1Q13233 1512 aa22.67■■□□□ 1.22
TUBE1-204ENST00000603621 ATP10AO60312 1499 aa22.66■■□□□ 1.22
TUBE1-204ENST00000603621 ZNF644Q9H582 1327 aaPredicted RBP22.66■■□□□ 1.22
TUBE1-204ENST00000603621 ADAMTSL3P82987 1691 aa22.66■■□□□ 1.22
TUBE1-204ENST00000603621 MLECQ14165 292 aa22.65■■□□□ 1.22
TUBE1-204ENST00000603621 PLEKHH2Q8IVE3 1493 aa22.64■■□□□ 1.21
TUBE1-204ENST00000603621 C9orf84Q5VXU9 1444 aa22.64■■□□□ 1.21
TUBE1-204ENST00000603621 MLH3Q9UHC1 1453 aa22.62■■□□□ 1.21
TUBE1-204ENST00000603621 ABCA6Q8N139 1617 aa22.62■■□□□ 1.21
TUBE1-204ENST00000603621 MADDQ8WXG6 1647 aa22.62■■□□□ 1.21
TUBE1-204ENST00000603621 DIP2CQ9Y2E4 1556 aa22.62■■□□□ 1.21
TUBE1-204ENST00000603621 KIDINS220Q9ULH0 1771 aa22.61■■□□□ 1.21
TUBE1-204ENST00000603621 KIAA1107Q9UPP5 1409 aa22.61■■□□□ 1.21
TUBE1-204ENST00000603621 SPAG9O60271 1321 aaKnown RBP22.59■■□□□ 1.21
TUBE1-204ENST00000603621 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.21
TUBE1-204ENST00000603621 CAMSAP2Q08AD1 1489 aa22.56■■□□□ 1.2
TUBE1-204ENST00000603621 PLPPR3Q6T4P5 718 aa22.56■■□□□ 1.2
TUBE1-204ENST00000603621 PTPRMP28827 1452 aa22.55■■□□□ 1.2
TUBE1-204ENST00000603621 FER1L4A9Z1Z3 1794 aa22.53■■□□□ 1.2
TUBE1-204ENST00000603621 ATP7AQ04656 1500 aa22.53■■□□□ 1.2
TUBE1-204ENST00000603621 MBD5Q9P267 1494 aa22.53■■□□□ 1.2
TUBE1-204ENST00000603621 INO80Q9ULG1 1556 aaPredicted RBP22.51■■□□□ 1.19
TUBE1-204ENST00000603621 REREQ9P2R6 1566 aa22.5■■□□□ 1.19
TUBE1-204ENST00000603621 MYOM3Q5VTT5 1437 aa22.5■■□□□ 1.19
TUBE1-204ENST00000603621 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
TUBE1-204ENST00000603621 RSPH4AQ5TD94 716 aa22.45■■□□□ 1.18
TUBE1-204ENST00000603621 AGLP35573 1532 aa22.45■■□□□ 1.18
TUBE1-204ENST00000603621 MIA2Q96PC5 1412 aa22.44■■□□□ 1.18
TUBE1-204ENST00000603621 ADGBQ8N7X0 1667 aa22.43■■□□□ 1.18
TUBE1-204ENST00000603621 A2MP01023 1474 aa22.43■■□□□ 1.18
TUBE1-204ENST00000603621 ARHGEF5Q12774 1597 aa22.42■■□□□ 1.18
TUBE1-204ENST00000603621 TSPY4P0CV99 314 aa22.42■■□□□ 1.18
TUBE1-204ENST00000603621 TSPY10P0CW01 314 aa22.42■■□□□ 1.18
TUBE1-204ENST00000603621 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
TUBE1-204ENST00000603621 ESF1Q9H501 851 aaKnown RBP22.41■■□□□ 1.18
TUBE1-204ENST00000603621 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.18
TUBE1-204ENST00000603621 CEBPAP49715 358 aaPredicted RBP22.39■■□□□ 1.17
TUBE1-204ENST00000603621 PLXNC1O60486 1568 aa22.38■■□□□ 1.17
TUBE1-204ENST00000603621 GGT6Q6P531 493 aa22.36■■□□□ 1.17
TUBE1-204ENST00000603621 FGD6Q6ZV73 1430 aa22.35■■□□□ 1.17
TUBE1-204ENST00000603621 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
TUBE1-204ENST00000603621 DHX29Q7Z478 1369 aaKnown RBP22.33■■□□□ 1.17
TUBE1-204ENST00000603621 C3P01024 1663 aa22.31■■□□□ 1.16
TUBE1-204ENST00000603621 MAST1Q9Y2H9 1570 aa22.3■■□□□ 1.16
TUBE1-204ENST00000603621 KIF3BO15066 747 aa22.3■■□□□ 1.16
TUBE1-204ENST00000603621 CLTCQ00610 1675 aaKnown RBP22.3■■□□□ 1.16
TUBE1-204ENST00000603621 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
TUBE1-204ENST00000603621 CROCC2H7BZ55 1655 aa22.28■■□□□ 1.16
TUBE1-204ENST00000603621 FAM50AQ14320 339 aaKnown RBP22.28■■□□□ 1.16
TUBE1-204ENST00000603621 ABCC5O15440 1437 aa22.27■■□□□ 1.16
TUBE1-204ENST00000603621 CNTLNQ9NXG0 1405 aa22.27■■□□□ 1.16
TUBE1-204ENST00000603621 DNMT1P26358 1616 aaKnown RBP22.26■■□□□ 1.15
TUBE1-204ENST00000603621 LMTK3Q96Q04 1460 aa22.26■■□□□ 1.15
TUBE1-204ENST00000603621 SETD1BQ9UPS6 1966 aaKnown RBP22.25■■□□□ 1.15
TUBE1-204ENST00000603621 DAPK1P53355 1430 aa22.25■■□□□ 1.15
TUBE1-204ENST00000603621 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
TUBE1-204ENST00000603621 MROH2AA6NES4 1674 aa22.23■■□□□ 1.15
TUBE1-204ENST00000603621 HSPA2P54652 639 aa22.23■■□□□ 1.15
TUBE1-204ENST00000603621 PREX1Q8TCU6 1659 aa22.23■■□□□ 1.15
TUBE1-204ENST00000603621 ZMYM3Q14202 1370 aa22.23■■□□□ 1.15
TUBE1-204ENST00000603621 RRP7BPQ9NSQ0 103 aa22.21■■□□□ 1.15
TUBE1-204ENST00000603621 SHANK2Q9UPX8 1470 aa22.21■■□□□ 1.15
TUBE1-204ENST00000603621 PPP6R1Q9UPN7 881 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms