RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 CDC42BPBQ9Y5S2 1711 aa26.17■■□□□ 1.78
PPFIA3-207ENST00000602716 ZNF777Q9ULD5 760 aaPredicted RBP26.15■■□□□ 1.78
PPFIA3-207ENST00000602716 MAPKBP1O60336 1514 aa26.14■■□□□ 1.77
PPFIA3-207ENST00000602716 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.77
PPFIA3-207ENST00000602716 ABCA9Q8IUA7 1624 aa26.12■■□□□ 1.77
PPFIA3-207ENST00000602716 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
PPFIA3-207ENST00000602716 ARHGAP5Q13017 1502 aa26.12■■□□□ 1.77
PPFIA3-207ENST00000602716 PLCH2O75038 1416 aa26.08■■□□□ 1.77
PPFIA3-207ENST00000602716 DNMT1P26358 1616 aaKnown RBP26.08■■□□□ 1.77
PPFIA3-207ENST00000602716 ABCC5O15440 1437 aa26.07■■□□□ 1.76
PPFIA3-207ENST00000602716 DAPK1P53355 1430 aa26.07■■□□□ 1.76
PPFIA3-207ENST00000602716 SYCP2Q9BX26 1530 aa26.02■■□□□ 1.76
PPFIA3-207ENST00000602716 ZEB1P37275 1124 aaPredicted RBP26.02■■□□□ 1.76
PPFIA3-207ENST00000602716 CHIC2Q9UKJ5 165 aa26.02■■□□□ 1.76
PPFIA3-207ENST00000602716 MBD5Q9P267 1494 aa26■■□□□ 1.75
PPFIA3-207ENST00000602716 ARAP3Q8WWN8 1544 aa25.99■■□□□ 1.75
PPFIA3-207ENST00000602716 CROCC2H7BZ55 1655 aa25.99■■□□□ 1.75
PPFIA3-207ENST00000602716 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
PPFIA3-207ENST00000602716 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
PPFIA3-207ENST00000602716 RAB3GAP2Q9H2M9 1393 aa25.96■■□□□ 1.75
PPFIA3-207ENST00000602716 ABCC1P33527 1531 aa25.96■■□□□ 1.75
PPFIA3-207ENST00000602716 DIP2BQ9P265 1576 aa25.96■■□□□ 1.75
PPFIA3-207ENST00000602716 FANCAO15360 1455 aa25.95■■□□□ 1.74
PPFIA3-207ENST00000602716 ARHGEF5Q12774 1597 aa25.94■■□□□ 1.74
PPFIA3-207ENST00000602716 HFM1A2PYH4 1435 aa25.94■■□□□ 1.74
PPFIA3-207ENST00000602716 SETD5Q9C0A6 1442 aa25.94■■□□□ 1.74
PPFIA3-207ENST00000602716 NAIPQ13075 1403 aa25.94■■□□□ 1.74
PPFIA3-207ENST00000602716 CD109Q6YHK3 1445 aa25.94■■□□□ 1.74
PPFIA3-207ENST00000602716 AKNAQ7Z591 1439 aa25.94■■□□□ 1.74
PPFIA3-207ENST00000602716 EFCAB2Q5VUJ9 269 aa25.93■■□□□ 1.74
PPFIA3-207ENST00000602716 RRP7BPQ9NSQ0 103 aa25.92■■□□□ 1.74
PPFIA3-207ENST00000602716 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
PPFIA3-207ENST00000602716 DNAJC5Q9H3Z4 198 aa25.9■■□□□ 1.74
PPFIA3-207ENST00000602716 GLI2P10070 1586 aa25.9■■□□□ 1.74
PPFIA3-207ENST00000602716 KIAA1107Q9UPP5 1409 aa25.9■■□□□ 1.74
PPFIA3-207ENST00000602716 MAP3K4Q9Y6R4 1608 aa25.9■■□□□ 1.74
PPFIA3-207ENST00000602716 PLEKHH2Q8IVE3 1493 aa25.89■■□□□ 1.74
PPFIA3-207ENST00000602716 SHANK2Q9UPX8 1470 aa25.89■■□□□ 1.74
PPFIA3-207ENST00000602716 C9orf84Q5VXU9 1444 aa25.88■■□□□ 1.73
PPFIA3-207ENST00000602716 KDM6BO15054 1643 aa25.88■■□□□ 1.73
PPFIA3-207ENST00000602716 GCC2Q8IWJ2 1684 aa25.88■■□□□ 1.73
PPFIA3-207ENST00000602716 TRAPPC8Q9Y2L5 1435 aa25.87■■□□□ 1.73
PPFIA3-207ENST00000602716 ROCK1Q13464 1354 aa25.86■■□□□ 1.73
PPFIA3-207ENST00000602716 ADGRL2O95490 1459 aa25.86■■□□□ 1.73
PPFIA3-207ENST00000602716 ADGBQ8N7X0 1667 aa25.86■■□□□ 1.73
PPFIA3-207ENST00000602716 ADGRL1O94910 1474 aa25.84■■□□□ 1.73
PPFIA3-207ENST00000602716 FAM69CQ0P6D2 419 aa25.84■■□□□ 1.73
PPFIA3-207ENST00000602716 NCOA1Q15788 1441 aa25.83■■□□□ 1.73
PPFIA3-207ENST00000602716 CCER1Q8TC90 406 aaPredicted RBP25.81■■□□□ 1.72
PPFIA3-207ENST00000602716 DHX57Q6P158 1386 aaKnown RBP25.79■■□□□ 1.72
PPFIA3-207ENST00000602716 SCAPERQ9BY12 1400 aa25.79■■□□□ 1.72
PPFIA3-207ENST00000602716 KIF13AQ9H1H9 1805 aa25.78■■□□□ 1.72
PPFIA3-207ENST00000602716 MAST1Q9Y2H9 1570 aa25.78■■□□□ 1.72
PPFIA3-207ENST00000602716 CFAP74Q9C0B2 1584 aa25.78■■□□□ 1.72
PPFIA3-207ENST00000602716 PPRC1Q5VV67 1664 aaKnown RBP25.77■■□□□ 1.72
PPFIA3-207ENST00000602716 ANKRD30AQ9BXX3 1397 aa25.76■■□□□ 1.72
PPFIA3-207ENST00000602716 TSPY4P0CV99 314 aa25.76■■□□□ 1.71
PPFIA3-207ENST00000602716 TSPY10P0CW01 314 aa25.76■■□□□ 1.71
PPFIA3-207ENST00000602716 AFAP1Q8N556 730 aa25.76■■□□□ 1.71
PPFIA3-207ENST00000602716 RSPH4AQ5TD94 716 aa25.73■■□□□ 1.71
PPFIA3-207ENST00000602716 NEO1Q92859 1461 aa25.73■■□□□ 1.71
PPFIA3-207ENST00000602716 KIF15Q9NS87 1388 aa25.72■■□□□ 1.71
PPFIA3-207ENST00000602716 ZFYVE16Q7Z3T8 1539 aa25.72■■□□□ 1.71
PPFIA3-207ENST00000602716 TSPOAP1O95153 1857 aa25.71■■□□□ 1.71
PPFIA3-207ENST00000602716 POGZQ7Z3K3 1410 aa25.7■■□□□ 1.7
PPFIA3-207ENST00000602716 PLXNC1O60486 1568 aa25.69■■□□□ 1.7
PPFIA3-207ENST00000602716 INO80Q9ULG1 1556 aaPredicted RBP25.68■■□□□ 1.7
PPFIA3-207ENST00000602716 ANKRD50Q9ULJ7 1429 aa25.67■■□□□ 1.7
PPFIA3-207ENST00000602716 SPAG9O60271 1321 aaKnown RBP25.66■■□□□ 1.7
PPFIA3-207ENST00000602716 ZNF518AQ6AHZ1 1483 aa25.65■■□□□ 1.7
PPFIA3-207ENST00000602716 ATP7AQ04656 1500 aa25.65■■□□□ 1.7
PPFIA3-207ENST00000602716 KDM5CP41229 1560 aa25.64■■□□□ 1.69
PPFIA3-207ENST00000602716 FRMPD1Q5SYB0 1578 aa25.61■■□□□ 1.69
PPFIA3-207ENST00000602716 RTEL1-TNFRSF6BF6WH68 1400 aa25.61■■□□□ 1.69
PPFIA3-207ENST00000602716 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
PPFIA3-207ENST00000602716 RAPGEF3O95398 923 aa25.61■■□□□ 1.69
PPFIA3-207ENST00000602716 TEX14Q8IWB6 1497 aa25.6■■□□□ 1.69
PPFIA3-207ENST00000602716 KIDINS220Q9ULH0 1771 aa25.59■■□□□ 1.69
PPFIA3-207ENST00000602716 RICTORQ6R327 1708 aa25.58■■□□□ 1.69
PPFIA3-207ENST00000602716 TRIM52Q96A61 297 aa25.57■■□□□ 1.68
PPFIA3-207ENST00000602716 DUOX2Q9NRD8 1548 aa25.56■■□□□ 1.68
PPFIA3-207ENST00000602716 HECW2Q9P2P5 1572 aa25.56■■□□□ 1.68
PPFIA3-207ENST00000602716 PZPP20742 1482 aa25.53■■□□□ 1.68
PPFIA3-207ENST00000602716 MLH3Q9UHC1 1453 aa25.52■■□□□ 1.68
PPFIA3-207ENST00000602716 COL17A1Q9UMD9 1497 aaPredicted RBP25.52■■□□□ 1.68
PPFIA3-207ENST00000602716 MYT1LQ9UL68 1186 aa25.51■■□□□ 1.67
PPFIA3-207ENST00000602716 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
PPFIA3-207ENST00000602716 ERBINQ96RT1 1412 aa25.51■■□□□ 1.67
PPFIA3-207ENST00000602716 YEATS2Q9ULM3 1422 aa25.47■■□□□ 1.67
PPFIA3-207ENST00000602716 UNC13BO14795 1591 aa25.46■■□□□ 1.67
PPFIA3-207ENST00000602716 TRHP20396 242 aaPredicted RBP25.46■■□□□ 1.67
PPFIA3-207ENST00000602716 ZMYM4Q5VZL5 1548 aa25.46■■□□□ 1.67
PPFIA3-207ENST00000602716 KDM5DQ9BY66 1539 aa25.46■■□□□ 1.67
PPFIA3-207ENST00000602716 MPHOSPH9Q99550 1183 aa25.46■■□□□ 1.67
PPFIA3-207ENST00000602716 DIP2CQ9Y2E4 1556 aa25.45■■□□□ 1.67
PPFIA3-207ENST00000602716 CLSPNQ9HAW4 1339 aa25.45■■□□□ 1.66
PPFIA3-207ENST00000602716 NUP155O75694 1391 aa25.44■■□□□ 1.66
PPFIA3-207ENST00000602716 FOXD1Q16676 465 aa25.43■■□□□ 1.66
PPFIA3-207ENST00000602716 MAGI2Q86UL8 1455 aa25.42■■□□□ 1.66
PPFIA3-207ENST00000602716 DHX29Q7Z478 1369 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms