RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PREX2Q70Z35 1606 aa26.53■■□□□ 1.84
SSBP4-213ENST00000602088 RICTORQ6R327 1708 aa26.53■■□□□ 1.84
SSBP4-213ENST00000602088 CDC42BPAQ5VT25 1732 aa26.51■■□□□ 1.83
SSBP4-213ENST00000602088 TIAM1Q13009 1591 aa26.5■■□□□ 1.83
SSBP4-213ENST00000602088 EHBP1L1Q8N3D4 1523 aa26.5■■□□□ 1.83
SSBP4-213ENST00000602088 GPATCH8Q9UKJ3 1502 aaKnown RBP26.48■■□□□ 1.83
SSBP4-213ENST00000602088 KDM4FA0A1W2PPD8 638 aa26.47■■□□□ 1.83
SSBP4-213ENST00000602088 POGZQ7Z3K3 1410 aa26.46■■□□□ 1.83
SSBP4-213ENST00000602088 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
SSBP4-213ENST00000602088 CCNB3Q8WWL7 1395 aa26.45■■□□□ 1.82
SSBP4-213ENST00000602088 MAP3K1Q13233 1512 aa26.44■■□□□ 1.82
SSBP4-213ENST00000602088 ZMYM4Q5VZL5 1548 aa26.44■■□□□ 1.82
SSBP4-213ENST00000602088 CFDP1Q9UEE9 299 aaPredicted RBP26.4■■□□□ 1.82
SSBP4-213ENST00000602088 LRRC9Q6ZRR7 1453 aa26.4■■□□□ 1.82
SSBP4-213ENST00000602088 ZNF518AQ6AHZ1 1483 aa26.39■■□□□ 1.82
SSBP4-213ENST00000602088 MAGI2Q86UL8 1455 aa26.39■■□□□ 1.82
SSBP4-213ENST00000602088 ABCC1P33527 1531 aa26.39■■□□□ 1.81
SSBP4-213ENST00000602088 AFAP1Q8N556 730 aa26.38■■□□□ 1.81
SSBP4-213ENST00000602088 ZNF777Q9ULD5 760 aaPredicted RBP26.38■■□□□ 1.81
SSBP4-213ENST00000602088 ARHGEF12Q9NZN5 1544 aa26.38■■□□□ 1.81
SSBP4-213ENST00000602088 SUPT6HQ7KZ85 1726 aaKnown RBP26.37■■□□□ 1.81
SSBP4-213ENST00000602088 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
SSBP4-213ENST00000602088 ARHGEF40Q8TER5 1519 aa26.37■■□□□ 1.81
SSBP4-213ENST00000602088 NCOA2Q15596 1464 aa26.36■■□□□ 1.81
SSBP4-213ENST00000602088 YEATS2Q9ULM3 1422 aa26.36■■□□□ 1.81
SSBP4-213ENST00000602088 ZFYVE16Q7Z3T8 1539 aa26.35■■□□□ 1.81
SSBP4-213ENST00000602088 SAMD9LQ8IVG5 1584 aa26.35■■□□□ 1.81
SSBP4-213ENST00000602088 KDM5CP41229 1560 aa26.34■■□□□ 1.81
SSBP4-213ENST00000602088 TRAPPC8Q9Y2L5 1435 aa26.33■■□□□ 1.81
SSBP4-213ENST00000602088 ITSN2Q9NZM3 1697 aa26.33■■□□□ 1.81
SSBP4-213ENST00000602088 APLP2Q06481 763 aa26.32■■□□□ 1.8
SSBP4-213ENST00000602088 KIAA1107Q9UPP5 1409 aa26.3■■□□□ 1.8
SSBP4-213ENST00000602088 PLEKHH2Q8IVE3 1493 aa26.3■■□□□ 1.8
SSBP4-213ENST00000602088 HNRNPMP52272 730 aaKnown RBP eCLIP26.29■■□□□ 1.81e-6■■□□□ 12.6
SSBP4-213ENST00000602088 SYCP2Q9BX26 1530 aa26.28■■□□□ 1.8
SSBP4-213ENST00000602088 ZNF644Q9H582 1327 aaPredicted RBP26.27■■□□□ 1.8
SSBP4-213ENST00000602088 MLH3Q9UHC1 1453 aa26.27■■□□□ 1.8
SSBP4-213ENST00000602088 ARID4BQ4LE39 1312 aaPredicted RBP26.26■■□□□ 1.79
SSBP4-213ENST00000602088 HECW2Q9P2P5 1572 aa26.25■■□□□ 1.79
SSBP4-213ENST00000602088 ATP10AO60312 1499 aa26.25■■□□□ 1.79
SSBP4-213ENST00000602088 MYT1LQ9UL68 1186 aa26.23■■□□□ 1.79
SSBP4-213ENST00000602088 SIGLEC1Q9BZZ2 1709 aa26.21■■□□□ 1.79
SSBP4-213ENST00000602088 BCORL1Q5H9F3 1711 aa26.19■■□□□ 1.78
SSBP4-213ENST00000602088 C9orf84Q5VXU9 1444 aa26.19■■□□□ 1.78
SSBP4-213ENST00000602088 DIP2CQ9Y2E4 1556 aa26.19■■□□□ 1.78
SSBP4-213ENST00000602088 ADAMTSL3P82987 1691 aa26.19■■□□□ 1.78
SSBP4-213ENST00000602088 MBD5Q9P267 1494 aa26.18■■□□□ 1.78
SSBP4-213ENST00000602088 KIDINS220Q9ULH0 1771 aa26.18■■□□□ 1.78
SSBP4-213ENST00000602088 SPAG9O60271 1321 aaKnown RBP26.17■■□□□ 1.78
SSBP4-213ENST00000602088 ABCA6Q8N139 1617 aa26.17■■□□□ 1.78
SSBP4-213ENST00000602088 CAMSAP2Q08AD1 1489 aa26.16■■□□□ 1.78
SSBP4-213ENST00000602088 MYOM3Q5VTT5 1437 aa26.15■■□□□ 1.78
SSBP4-213ENST00000602088 REREQ9P2R6 1566 aa26.12■■□□□ 1.77
SSBP4-213ENST00000602088 MIA2Q96PC5 1412 aa26.12■■□□□ 1.77
SSBP4-213ENST00000602088 INO80Q9ULG1 1556 aaPredicted RBP26.11■■□□□ 1.77
SSBP4-213ENST00000602088 ATP7AQ04656 1500 aa26.1■■□□□ 1.77
SSBP4-213ENST00000602088 RSPH4AQ5TD94 716 aa26.1■■□□□ 1.77
SSBP4-213ENST00000602088 MADDQ8WXG6 1647 aa26.08■■□□□ 1.77
SSBP4-213ENST00000602088 MLECQ14165 292 aa26.08■■□□□ 1.77
SSBP4-213ENST00000602088 CCDC141Q6ZP82 1450 aa26.08■■□□□ 1.77
SSBP4-213ENST00000602088 RTEL1-TNFRSF6BF6WH68 1400 aa26.05■■□□□ 1.76
SSBP4-213ENST00000602088 PTPRMP28827 1452 aa26.05■■□□□ 1.76
SSBP4-213ENST00000602088 AGLP35573 1532 aa26.05■■□□□ 1.76
SSBP4-213ENST00000602088 ARHGEF5Q12774 1597 aa26.05■■□□□ 1.76
SSBP4-213ENST00000602088 RIMS1Q86UR5 1692 aaKnown RBP25.99■■□□□ 1.75
SSBP4-213ENST00000602088 FGD6Q6ZV73 1430 aa25.99■■□□□ 1.75
SSBP4-213ENST00000602088 TSPY4P0CV99 314 aa25.99■■□□□ 1.75
SSBP4-213ENST00000602088 TSPY10P0CW01 314 aa25.99■■□□□ 1.75
SSBP4-213ENST00000602088 A2MP01023 1474 aa25.98■■□□□ 1.75
SSBP4-213ENST00000602088 FER1L4A9Z1Z3 1794 aa25.97■■□□□ 1.75
SSBP4-213ENST00000602088 PTPN23Q9H3S7 1636 aa25.97■■□□□ 1.75
SSBP4-213ENST00000602088 ADGBQ8N7X0 1667 aa25.96■■□□□ 1.75
SSBP4-213ENST00000602088 PLXNC1O60486 1568 aa25.96■■□□□ 1.75
SSBP4-213ENST00000602088 TCOF1Q13428 1488 aaKnown RBP25.93■■□□□ 1.74
SSBP4-213ENST00000602088 DHX29Q7Z478 1369 aaKnown RBP25.92■■□□□ 1.74
SSBP4-213ENST00000602088 MAST1Q9Y2H9 1570 aa25.91■■□□□ 1.74
SSBP4-213ENST00000602088 ABCC5O15440 1437 aa25.88■■□□□ 1.73
SSBP4-213ENST00000602088 PPARGC1BQ86YN6 1023 aaKnown RBP25.87■■□□□ 1.73
SSBP4-213ENST00000602088 PLPPR3Q6T4P5 718 aa25.85■■□□□ 1.73
SSBP4-213ENST00000602088 ESF1Q9H501 851 aaKnown RBP25.85■■□□□ 1.73
SSBP4-213ENST00000602088 DNMT1P26358 1616 aaKnown RBP25.85■■□□□ 1.73
SSBP4-213ENST00000602088 DAPK1P53355 1430 aa25.84■■□□□ 1.73
SSBP4-213ENST00000602088 GGT6Q6P531 493 aa25.83■■□□□ 1.73
SSBP4-213ENST00000602088 SHANK2Q9UPX8 1470 aa25.83■■□□□ 1.73
SSBP4-213ENST00000602088 CEBPAP49715 358 aaPredicted RBP25.82■■□□□ 1.72
SSBP4-213ENST00000602088 CROCC2H7BZ55 1655 aa25.82■■□□□ 1.72
SSBP4-213ENST00000602088 CNTLNQ9NXG0 1405 aa25.81■■□□□ 1.72
SSBP4-213ENST00000602088 FAM50AQ14320 339 aaKnown RBP25.81■■□□□ 1.72
SSBP4-213ENST00000602088 KIF3BO15066 747 aa25.8■■□□□ 1.72
SSBP4-213ENST00000602088 PPP6R1Q9UPN7 881 aa25.8■■□□□ 1.72
SSBP4-213ENST00000602088 C3P01024 1663 aa25.76■■□□□ 1.71
SSBP4-213ENST00000602088 MROH2AA6NES4 1674 aa25.74■■□□□ 1.71
SSBP4-213ENST00000602088 CHIC2Q9UKJ5 165 aa25.74■■□□□ 1.71
SSBP4-213ENST00000602088 DUOX2Q9NRD8 1548 aa25.73■■□□□ 1.71
SSBP4-213ENST00000602088 ZMYM3Q14202 1370 aa25.73■■□□□ 1.71
SSBP4-213ENST00000602088 KIF15Q9NS87 1388 aa25.73■■□□□ 1.71
SSBP4-213ENST00000602088 RRP7BPQ9NSQ0 103 aa25.73■■□□□ 1.71
SSBP4-213ENST00000602088 CLTCQ00610 1675 aaKnown RBP25.72■■□□□ 1.71
SSBP4-213ENST00000602088 LMTK3Q96Q04 1460 aa25.72■■□□□ 1.71
SSBP4-213ENST00000602088 EIF2AK4Q9P2K8 1649 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms