RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
SSBP4-212ENST00000601919 GLI2P10070 1586 aa28.2■■■□□ 2.11
SSBP4-212ENST00000601919 PLCH2O75038 1416 aa28.2■■■□□ 2.11
SSBP4-212ENST00000601919 ARHGAP5Q13017 1502 aa28.19■■■□□ 2.1
SSBP4-212ENST00000601919 DIP2BQ9P265 1576 aa28.16■■■□□ 2.1
SSBP4-212ENST00000601919 CD109Q6YHK3 1445 aa28.13■■■□□ 2.09
SSBP4-212ENST00000601919 EFCAB2Q5VUJ9 269 aa28.13■■■□□ 2.09
SSBP4-212ENST00000601919 ZNF777Q9ULD5 760 aaPredicted RBP28.13■■■□□ 2.09
SSBP4-212ENST00000601919 CAMSAP2Q08AD1 1489 aa28.13■■■□□ 2.09
SSBP4-212ENST00000601919 MAP3K4Q9Y6R4 1608 aa28.1■■■□□ 2.09
SSBP4-212ENST00000601919 PLEKHH2Q8IVE3 1493 aa28.1■■■□□ 2.09
SSBP4-212ENST00000601919 FAM69CQ0P6D2 419 aa28.1■■■□□ 2.09
SSBP4-212ENST00000601919 CFAP74Q9C0B2 1584 aa28.09■■■□□ 2.09
SSBP4-212ENST00000601919 SAMD9LQ8IVG5 1584 aa28.07■■■□□ 2.08
SSBP4-212ENST00000601919 ZNF644Q9H582 1327 aaPredicted RBP28.06■■■□□ 2.08
SSBP4-212ENST00000601919 FANCAO15360 1455 aa28.06■■■□□ 2.08
SSBP4-212ENST00000601919 KIF13AQ9H1H9 1805 aa28.04■■■□□ 2.08
SSBP4-212ENST00000601919 ITGAEP38570 1179 aa28.03■■■□□ 2.08
SSBP4-212ENST00000601919 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
SSBP4-212ENST00000601919 KIAA1107Q9UPP5 1409 aa28.02■■■□□ 2.08
SSBP4-212ENST00000601919 RSPH4AQ5TD94 716 aa28.01■■■□□ 2.07
SSBP4-212ENST00000601919 ARHGEF5Q12774 1597 aa28■■■□□ 2.07
SSBP4-212ENST00000601919 ABCC1P33527 1531 aa27.98■■■□□ 2.07
SSBP4-212ENST00000601919 NEO1Q92859 1461 aa27.98■■■□□ 2.07
SSBP4-212ENST00000601919 DAPK1P53355 1430 aa27.98■■■□□ 2.07
SSBP4-212ENST00000601919 SYCP2Q9BX26 1530 aa27.97■■■□□ 2.07
SSBP4-212ENST00000601919 TEX14Q8IWB6 1497 aa27.95■■■□□ 2.07
SSBP4-212ENST00000601919 AKNAQ7Z591 1439 aa27.95■■■□□ 2.07
SSBP4-212ENST00000601919 CROCC2H7BZ55 1655 aa27.95■■■□□ 2.07
SSBP4-212ENST00000601919 ABCC5O15440 1437 aa27.94■■■□□ 2.06
SSBP4-212ENST00000601919 MBD5Q9P267 1494 aa27.94■■■□□ 2.06
SSBP4-212ENST00000601919 TSPOAP1O95153 1857 aa27.93■■■□□ 2.06
SSBP4-212ENST00000601919 HNRNPMP52272 730 aaKnown RBP eCLIP27.93■■■□□ 2.06
SSBP4-212ENST00000601919 ADGRL1O94910 1474 aa27.93■■■□□ 2.06
SSBP4-212ENST00000601919 CCDC141Q6ZP82 1450 aa27.93■■■□□ 2.06
SSBP4-212ENST00000601919 SHANK2Q9UPX8 1470 aa27.91■■■□□ 2.06
SSBP4-212ENST00000601919 TSPY4P0CV99 314 aa27.9■■■□□ 2.06
SSBP4-212ENST00000601919 TSPY10P0CW01 314 aa27.9■■■□□ 2.06
SSBP4-212ENST00000601919 PPRC1Q5VV67 1664 aaKnown RBP27.88■■■□□ 2.05
SSBP4-212ENST00000601919 PTPRKQ15262 1439 aa27.88■■■□□ 2.05
SSBP4-212ENST00000601919 ADGBQ8N7X0 1667 aa27.87■■■□□ 2.05
SSBP4-212ENST00000601919 SCAPERQ9BY12 1400 aa27.87■■■□□ 2.05
SSBP4-212ENST00000601919 ARHGEF12Q9NZN5 1544 aa27.87■■■□□ 2.05
SSBP4-212ENST00000601919 ROCK1Q13464 1354 aa27.86■■■□□ 2.05
SSBP4-212ENST00000601919 TRHP20396 242 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-212ENST00000601919 C9orf84Q5VXU9 1444 aa27.84■■■□□ 2.05
SSBP4-212ENST00000601919 MAST1Q9Y2H9 1570 aa27.82■■■□□ 2.04
SSBP4-212ENST00000601919 CHIC2Q9UKJ5 165 aa27.82■■■□□ 2.04
SSBP4-212ENST00000601919 TRAPPC8Q9Y2L5 1435 aa27.81■■■□□ 2.04
SSBP4-212ENST00000601919 ADGRL2O95490 1459 aa27.81■■■□□ 2.04
SSBP4-212ENST00000601919 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
SSBP4-212ENST00000601919 ZNF518AQ6AHZ1 1483 aa27.8■■■□□ 2.04
SSBP4-212ENST00000601919 HFM1A2PYH4 1435 aa27.79■■■□□ 2.04
SSBP4-212ENST00000601919 DENND4BO75064 1496 aaPredicted RBP27.78■■■□□ 2.04
SSBP4-212ENST00000601919 SETD5Q9C0A6 1442 aa27.77■■■□□ 2.04
SSBP4-212ENST00000601919 POGZQ7Z3K3 1410 aa27.76■■■□□ 2.04
SSBP4-212ENST00000601919 GCC2Q8IWJ2 1684 aa27.76■■■□□ 2.03
SSBP4-212ENST00000601919 RTEL1-TNFRSF6BF6WH68 1400 aa27.75■■■□□ 2.03
SSBP4-212ENST00000601919 NCOA1Q15788 1441 aa27.75■■■□□ 2.03
SSBP4-212ENST00000601919 SPAG9O60271 1321 aaKnown RBP27.74■■■□□ 2.03
SSBP4-212ENST00000601919 AFAP1Q8N556 730 aa27.74■■■□□ 2.03
SSBP4-212ENST00000601919 RRP7BPQ9NSQ0 103 aa27.73■■■□□ 2.03
SSBP4-212ENST00000601919 NAIPQ13075 1403 aa27.73■■■□□ 2.03
SSBP4-212ENST00000601919 PLXNC1O60486 1568 aa27.72■■■□□ 2.03
SSBP4-212ENST00000601919 KDM5CP41229 1560 aa27.72■■■□□ 2.03
SSBP4-212ENST00000601919 RICTORQ6R327 1708 aa27.7■■■□□ 2.03
SSBP4-212ENST00000601919 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-212ENST00000601919 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
SSBP4-212ENST00000601919 ATP7AQ04656 1500 aa27.68■■■□□ 2.02
SSBP4-212ENST00000601919 ZFYVE16Q7Z3T8 1539 aa27.68■■■□□ 2.02
SSBP4-212ENST00000601919 HRCP23327 699 aa27.68■■■□□ 2.02
SSBP4-212ENST00000601919 RAB3GAP2Q9H2M9 1393 aa27.67■■■□□ 2.02
SSBP4-212ENST00000601919 HECW2Q9P2P5 1572 aa27.66■■■□□ 2.02
SSBP4-212ENST00000601919 KIF15Q9NS87 1388 aa27.66■■■□□ 2.02
SSBP4-212ENST00000601919 MYT1LQ9UL68 1186 aa27.66■■■□□ 2.02
SSBP4-212ENST00000601919 MLH3Q9UHC1 1453 aa27.65■■■□□ 2.02
SSBP4-212ENST00000601919 RAPGEF3O95398 923 aa27.63■■■□□ 2.01
SSBP4-212ENST00000601919 KIDINS220Q9ULH0 1771 aa27.61■■■□□ 2.01
SSBP4-212ENST00000601919 ZMYM4Q5VZL5 1548 aa27.61■■■□□ 2.01
SSBP4-212ENST00000601919 DUOX2Q9NRD8 1548 aa27.61■■■□□ 2.01
SSBP4-212ENST00000601919 FRMPD1Q5SYB0 1578 aa27.6■■■□□ 2.01
SSBP4-212ENST00000601919 ANKRD50Q9ULJ7 1429 aa27.59■■■□□ 2.01
SSBP4-212ENST00000601919 MAGI2Q86UL8 1455 aa27.57■■■□□ 2
SSBP4-212ENST00000601919 ERBINQ96RT1 1412 aa27.54■■■□□ 2
SSBP4-212ENST00000601919 KDM6BO15054 1643 aa27.52■■■□□ 2
SSBP4-212ENST00000601919 COL17A1Q9UMD9 1497 aaPredicted RBP27.51■■■□□ 2
SSBP4-212ENST00000601919 ABCA6Q8N139 1617 aa27.49■■□□□ 1.99
SSBP4-212ENST00000601919 DHX29Q7Z478 1369 aaKnown RBP27.48■■□□□ 1.99
SSBP4-212ENST00000601919 A2MP01023 1474 aa27.47■■□□□ 1.99
SSBP4-212ENST00000601919 DIP2CQ9Y2E4 1556 aa27.47■■□□□ 1.99
SSBP4-212ENST00000601919 EIF2AK4Q9P2K8 1649 aaKnown RBP27.46■■□□□ 1.99
SSBP4-212ENST00000601919 TRIM52Q96A61 297 aa27.44■■□□□ 1.98
SSBP4-212ENST00000601919 CCER1Q8TC90 406 aaPredicted RBP27.43■■□□□ 1.98
SSBP4-212ENST00000601919 YEATS2Q9ULM3 1422 aa27.41■■□□□ 1.98
SSBP4-212ENST00000601919 ATP10AO60312 1499 aa27.4■■□□□ 1.98
SSBP4-212ENST00000601919 ARHGEF40Q8TER5 1519 aa27.4■■□□□ 1.98
SSBP4-212ENST00000601919 UNC13BO14795 1591 aa27.39■■□□□ 1.98
SSBP4-212ENST00000601919 DHX57Q6P158 1386 aaKnown RBP27.38■■□□□ 1.97
SSBP4-212ENST00000601919 REREQ9P2R6 1566 aa27.38■■□□□ 1.97
SSBP4-212ENST00000601919 BCORL1Q5H9F3 1711 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms