RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 TEX14Q8IWB6 1497 aa20.53■□□□□ 0.88
IRF3-229ENST00000601373 ITSN2Q9NZM3 1697 aa20.52■□□□□ 0.88
IRF3-229ENST00000601373 ITGAEP38570 1179 aa20.52■□□□□ 0.88
IRF3-229ENST00000601373 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.87
IRF3-229ENST00000601373 PPRC1Q5VV67 1664 aaKnown RBP20.51■□□□□ 0.87
IRF3-229ENST00000601373 HRCP23327 699 aa20.51■□□□□ 0.87
IRF3-229ENST00000601373 CFDP1Q9UEE9 299 aaPredicted RBP20.5■□□□□ 0.87
IRF3-229ENST00000601373 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
IRF3-229ENST00000601373 COL17A1Q9UMD9 1497 aaPredicted RBP20.45■□□□□ 0.86
IRF3-229ENST00000601373 MAP3K4Q9Y6R4 1608 aa20.45■□□□□ 0.86
IRF3-229ENST00000601373 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
IRF3-229ENST00000601373 CDC42BPAQ5VT25 1732 aa20.42■□□□□ 0.86
IRF3-229ENST00000601373 KCNH8Q96L42 1107 aa20.42■□□□□ 0.86
IRF3-229ENST00000601373 WDR7Q9Y4E6 1490 aa20.42■□□□□ 0.86
IRF3-229ENST00000601373 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
IRF3-229ENST00000601373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.41■□□□□ 0.863e-7■□□□□ 11.1
IRF3-229ENST00000601373 CAMSAP2Q08AD1 1489 aa20.39■□□□□ 0.85
IRF3-229ENST00000601373 ZNF777Q9ULD5 760 aaPredicted RBP20.38■□□□□ 0.85
IRF3-229ENST00000601373 PTPRKQ15262 1439 aa20.37■□□□□ 0.85
IRF3-229ENST00000601373 ZNF644Q9H582 1327 aaPredicted RBP20.37■□□□□ 0.85
IRF3-229ENST00000601373 PREX2Q70Z35 1606 aa20.37■□□□□ 0.85
IRF3-229ENST00000601373 HECW2Q9P2P5 1572 aa20.37■□□□□ 0.85
IRF3-229ENST00000601373 DAPK1P53355 1430 aa20.36■□□□□ 0.85
IRF3-229ENST00000601373 DNMT1P26358 1616 aaKnown RBP20.35■□□□□ 0.85
IRF3-229ENST00000601373 TTC37Q6PGP7 1564 aa20.35■□□□□ 0.85
IRF3-229ENST00000601373 PLCH2O75038 1416 aa20.35■□□□□ 0.85
IRF3-229ENST00000601373 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
IRF3-229ENST00000601373 MYO5CQ9NQX4 1742 aa20.34■□□□□ 0.85
IRF3-229ENST00000601373 RSPH4AQ5TD94 716 aa20.34■□□□□ 0.85
IRF3-229ENST00000601373 HFM1A2PYH4 1435 aa20.34■□□□□ 0.85
IRF3-229ENST00000601373 ABCC5O15440 1437 aa20.34■□□□□ 0.85
IRF3-229ENST00000601373 AKNAQ7Z591 1439 aa20.34■□□□□ 0.85
IRF3-229ENST00000601373 CDC42BPBQ9Y5S2 1711 aa20.33■□□□□ 0.85
IRF3-229ENST00000601373 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
IRF3-229ENST00000601373 ROCK1Q13464 1354 aa20.33■□□□□ 0.84
IRF3-229ENST00000601373 EFCAB2Q5VUJ9 269 aa20.31■□□□□ 0.84
IRF3-229ENST00000601373 ARHGAP5Q13017 1502 aa20.31■□□□□ 0.84
IRF3-229ENST00000601373 ARAP3Q8WWN8 1544 aa20.31■□□□□ 0.84
IRF3-229ENST00000601373 PLEKHH2Q8IVE3 1493 aa20.3■□□□□ 0.84
IRF3-229ENST00000601373 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
IRF3-229ENST00000601373 CD109Q6YHK3 1445 aa20.29■□□□□ 0.84
IRF3-229ENST00000601373 NAIPQ13075 1403 aa20.28■□□□□ 0.84
IRF3-229ENST00000601373 ABCA9Q8IUA7 1624 aa20.28■□□□□ 0.84
IRF3-229ENST00000601373 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
IRF3-229ENST00000601373 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
IRF3-229ENST00000601373 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
IRF3-229ENST00000601373 KIAA1107Q9UPP5 1409 aa20.27■□□□□ 0.84
IRF3-229ENST00000601373 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
IRF3-229ENST00000601373 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
IRF3-229ENST00000601373 TSPY4P0CV99 314 aa20.25■□□□□ 0.83
IRF3-229ENST00000601373 TSPY10P0CW01 314 aa20.25■□□□□ 0.83
IRF3-229ENST00000601373 SHANK2Q9UPX8 1470 aa20.24■□□□□ 0.83
IRF3-229ENST00000601373 RRP7BPQ9NSQ0 103 aa20.24■□□□□ 0.83
IRF3-229ENST00000601373 MBD5Q9P267 1494 aa20.24■□□□□ 0.83
IRF3-229ENST00000601373 HNRNPMP52272 730 aaKnown RBP eCLIP20.23■□□□□ 0.83
IRF3-229ENST00000601373 ADGRL2O95490 1459 aa20.23■□□□□ 0.83
IRF3-229ENST00000601373 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
IRF3-229ENST00000601373 GCC2Q8IWJ2 1684 aa20.22■□□□□ 0.83
IRF3-229ENST00000601373 CCDC141Q6ZP82 1450 aa20.22■□□□□ 0.83
IRF3-229ENST00000601373 ANKRD30AQ9BXX3 1397 aa20.21■□□□□ 0.83
IRF3-229ENST00000601373 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.82
IRF3-229ENST00000601373 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
IRF3-229ENST00000601373 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
IRF3-229ENST00000601373 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
IRF3-229ENST00000601373 FBXO41Q8TF61 875 aa20.16■□□□□ 0.82
IRF3-229ENST00000601373 FANCAO15360 1455 aa20.16■□□□□ 0.82
IRF3-229ENST00000601373 ABCC1P33527 1531 aa20.15■□□□□ 0.82
IRF3-229ENST00000601373 MAST1Q9Y2H9 1570 aa20.14■□□□□ 0.81
IRF3-229ENST00000601373 ARHGEF12Q9NZN5 1544 aa20.12■□□□□ 0.81
IRF3-229ENST00000601373 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
IRF3-229ENST00000601373 TRIM52Q96A61 297 aa20.07■□□□□ 0.8
IRF3-229ENST00000601373 ANKRD50Q9ULJ7 1429 aa20.07■□□□□ 0.8
IRF3-229ENST00000601373 KIF15Q9NS87 1388 aa20.07■□□□□ 0.8
IRF3-229ENST00000601373 RTEL1-TNFRSF6BF6WH68 1400 aa20.06■□□□□ 0.8
IRF3-229ENST00000601373 SCAPERQ9BY12 1400 aa20.06■□□□□ 0.8
IRF3-229ENST00000601373 TRAPPC8Q9Y2L5 1435 aa20.06■□□□□ 0.8
IRF3-229ENST00000601373 NEO1Q92859 1461 aa20.05■□□□□ 0.8
IRF3-229ENST00000601373 PTPRMP28827 1452 aa20.05■□□□□ 0.8
IRF3-229ENST00000601373 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
IRF3-229ENST00000601373 SPAG9O60271 1321 aaKnown RBP20.03■□□□□ 0.8
IRF3-229ENST00000601373 ADAMTSL3P82987 1691 aa20.01■□□□□ 0.79
IRF3-229ENST00000601373 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
IRF3-229ENST00000601373 MPHOSPH9Q99550 1183 aa20■□□□□ 0.79
IRF3-229ENST00000601373 DUOX2Q9NRD8 1548 aa19.98■□□□□ 0.79
IRF3-229ENST00000601373 ZNF518AQ6AHZ1 1483 aa19.98■□□□□ 0.79
IRF3-229ENST00000601373 RAPGEF3O95398 923 aa19.97■□□□□ 0.79
IRF3-229ENST00000601373 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
IRF3-229ENST00000601373 ERBINQ96RT1 1412 aa19.94■□□□□ 0.78
IRF3-229ENST00000601373 ZFYVE16Q7Z3T8 1539 aa19.94■□□□□ 0.78
IRF3-229ENST00000601373 POGZQ7Z3K3 1410 aa19.93■□□□□ 0.78
IRF3-229ENST00000601373 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
IRF3-229ENST00000601373 INO80Q9ULG1 1556 aaPredicted RBP19.93■□□□□ 0.78
IRF3-229ENST00000601373 SLC4A1APQ9BWU0 796 aaKnown RBP19.93■□□□□ 0.78
IRF3-229ENST00000601373 ARID4BQ4LE39 1312 aaPredicted RBP19.93■□□□□ 0.78
IRF3-229ENST00000601373 DENND4BO75064 1496 aaPredicted RBP19.92■□□□□ 0.78
IRF3-229ENST00000601373 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
IRF3-229ENST00000601373 BCORL1Q5H9F3 1711 aa19.92■□□□□ 0.78
IRF3-229ENST00000601373 KDM5DQ9BY66 1539 aa19.92■□□□□ 0.78
IRF3-229ENST00000601373 NUP155O75694 1391 aa19.91■□□□□ 0.78
IRF3-229ENST00000601373 PZPP20742 1482 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms