RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CDC42BPBQ9Y5S2 1711 aa34.07■■■■□ 3.04
IRF3-228ENST00000601291 ARHGAP5Q13017 1502 aa34.06■■■■□ 3.04
IRF3-228ENST00000601291 PLCH2O75038 1416 aa34.06■■■■□ 3.04
IRF3-228ENST00000601291 ZNF777Q9ULD5 760 aaPredicted RBP34.04■■■■□ 3.04
IRF3-228ENST00000601291 ARAP3Q8WWN8 1544 aa34.03■■■■□ 3.04
IRF3-228ENST00000601291 DNAJC5Q9H3Z4 198 aa34.02■■■■□ 3.04
IRF3-228ENST00000601291 ZNF644Q9H582 1327 aaPredicted RBP34.01■■■■□ 3.03
IRF3-228ENST00000601291 DNMT1P26358 1616 aaKnown RBP33.96■■■■□ 3.03
IRF3-228ENST00000601291 SAMD9LQ8IVG5 1584 aa33.96■■■■□ 3.03
IRF3-228ENST00000601291 EFCAB2Q5VUJ9 269 aa33.94■■■■□ 3.02
IRF3-228ENST00000601291 PLEKHH2Q8IVE3 1493 aa33.93■■■■□ 3.02
IRF3-228ENST00000601291 DAPK1P53355 1430 aa33.93■■■■□ 3.02
IRF3-228ENST00000601291 GLI2P10070 1586 aa33.92■■■■□ 3.02
IRF3-228ENST00000601291 CD109Q6YHK3 1445 aa33.9■■■■□ 3.02
IRF3-228ENST00000601291 PTPRKQ15262 1439 aa33.88■■■■□ 3.01
IRF3-228ENST00000601291 DIP2BQ9P265 1576 aa33.88■■■■□ 3.01
IRF3-228ENST00000601291 ABCC5O15440 1437 aa33.88■■■■□ 3.01
IRF3-228ENST00000601291 FANCAO15360 1455 aa33.87■■■■□ 3.01
IRF3-228ENST00000601291 ARHGEF5Q12774 1597 aa33.86■■■■□ 3.01
IRF3-228ENST00000601291 KIAA1107Q9UPP5 1409 aa33.85■■■■□ 3.01
IRF3-228ENST00000601291 SYCP2Q9BX26 1530 aa33.83■■■■□ 3.01
IRF3-228ENST00000601291 CROCC2H7BZ55 1655 aa33.83■■■■□ 3.01
IRF3-228ENST00000601291 MAP3K4Q9Y6R4 1608 aa33.83■■■■□ 3.01
IRF3-228ENST00000601291 CFAP74Q9C0B2 1584 aa33.82■■■■□ 3
IRF3-228ENST00000601291 ABCC1P33527 1531 aa33.82■■■■□ 3
IRF3-228ENST00000601291 MBD5Q9P267 1494 aa33.81■■■■□ 3
IRF3-228ENST00000601291 RSPH4AQ5TD94 716 aa33.81■■■■□ 3
IRF3-228ENST00000601291 CCDC141Q6ZP82 1450 aa33.8■■■■□ 3
IRF3-228ENST00000601291 HNRNPMP52272 730 aaKnown RBP eCLIP33.79■■■■□ 3
IRF3-228ENST00000601291 FAM69CQ0P6D2 419 aa33.79■■■■□ 3
IRF3-228ENST00000601291 SHANK2Q9UPX8 1470 aa33.78■■■■□ 3
IRF3-228ENST00000601291 AKNAQ7Z591 1439 aa33.77■■■■□ 3
IRF3-228ENST00000601291 CHIC2Q9UKJ5 165 aa33.76■■■□□ 2.99
IRF3-228ENST00000601291 HFM1A2PYH4 1435 aa33.75■■■□□ 2.99
IRF3-228ENST00000601291 SETD5Q9C0A6 1442 aa33.75■■■□□ 2.99
IRF3-228ENST00000601291 ROCK1Q13464 1354 aa33.75■■■□□ 2.99
IRF3-228ENST00000601291 ADGBQ8N7X0 1667 aa33.72■■■□□ 2.99
IRF3-228ENST00000601291 TSPY4P0CV99 314 aa33.72■■■□□ 2.99
IRF3-228ENST00000601291 TSPY10P0CW01 314 aa33.72■■■□□ 2.99
IRF3-228ENST00000601291 ADGRL1O94910 1474 aa33.72■■■□□ 2.99
IRF3-228ENST00000601291 ARHGEF12Q9NZN5 1544 aa33.72■■■□□ 2.99
IRF3-228ENST00000601291 C9orf84Q5VXU9 1444 aa33.7■■■□□ 2.99
IRF3-228ENST00000601291 NEO1Q92859 1461 aa33.7■■■□□ 2.99
IRF3-228ENST00000601291 ADGRL2O95490 1459 aa33.69■■■□□ 2.98
IRF3-228ENST00000601291 GCC2Q8IWJ2 1684 aa33.68■■■□□ 2.98
IRF3-228ENST00000601291 RAB3GAP2Q9H2M9 1393 aa33.67■■■□□ 2.98
IRF3-228ENST00000601291 NAIPQ13075 1403 aa33.67■■■□□ 2.98
IRF3-228ENST00000601291 RRP7BPQ9NSQ0 103 aa33.65■■■□□ 2.98
IRF3-228ENST00000601291 ANKRD30AQ9BXX3 1397 aa33.65■■■□□ 2.98
IRF3-228ENST00000601291 MAST1Q9Y2H9 1570 aa33.65■■■□□ 2.98
IRF3-228ENST00000601291 KIF13AQ9H1H9 1805 aa33.65■■■□□ 2.98
IRF3-228ENST00000601291 SCAPERQ9BY12 1400 aa33.64■■■□□ 2.98
IRF3-228ENST00000601291 TRAPPC8Q9Y2L5 1435 aa33.62■■■□□ 2.97
IRF3-228ENST00000601291 NCOA1Q15788 1441 aa33.62■■■□□ 2.97
IRF3-228ENST00000601291 TEX14Q8IWB6 1497 aa33.61■■■□□ 2.97
IRF3-228ENST00000601291 HRCP23327 699 aa33.6■■■□□ 2.97
IRF3-228ENST00000601291 ZNF518AQ6AHZ1 1483 aa33.55■■■□□ 2.96
IRF3-228ENST00000601291 PPRC1Q5VV67 1664 aaKnown RBP33.55■■■□□ 2.96
IRF3-228ENST00000601291 TSPOAP1O95153 1857 aa33.54■■■□□ 2.96
IRF3-228ENST00000601291 PLXNC1O60486 1568 aa33.52■■■□□ 2.96
IRF3-228ENST00000601291 AFAP1Q8N556 730 aa33.51■■■□□ 2.96
IRF3-228ENST00000601291 CCER1Q8TC90 406 aaPredicted RBP33.51■■■□□ 2.96
IRF3-228ENST00000601291 RTEL1-TNFRSF6BF6WH68 1400 aa33.51■■■□□ 2.96
IRF3-228ENST00000601291 POGZQ7Z3K3 1410 aa33.51■■■□□ 2.96
IRF3-228ENST00000601291 SPAG9O60271 1321 aaKnown RBP33.51■■■□□ 2.96
IRF3-228ENST00000601291 KIF15Q9NS87 1388 aa33.49■■■□□ 2.95
IRF3-228ENST00000601291 DENND4BO75064 1496 aaPredicted RBP33.49■■■□□ 2.95
IRF3-228ENST00000601291 ZFYVE16Q7Z3T8 1539 aa33.48■■■□□ 2.95
IRF3-228ENST00000601291 INO80Q9ULG1 1556 aaPredicted RBP33.46■■■□□ 2.95
IRF3-228ENST00000601291 ACIN1Q9UKV3 1341 aaKnown RBP33.46■■■□□ 2.95
IRF3-228ENST00000601291 KDM5CP41229 1560 aa33.45■■■□□ 2.95
IRF3-228ENST00000601291 ATP7AQ04656 1500 aa33.44■■■□□ 2.94
IRF3-228ENST00000601291 KDM6BO15054 1643 aa33.44■■■□□ 2.94
IRF3-228ENST00000601291 ANKRD50Q9ULJ7 1429 aa33.43■■■□□ 2.94
IRF3-228ENST00000601291 DHX57Q6P158 1386 aaKnown RBP33.4■■■□□ 2.94
IRF3-228ENST00000601291 DUOX2Q9NRD8 1548 aa33.39■■■□□ 2.94
IRF3-228ENST00000601291 MYT1LQ9UL68 1186 aa33.38■■■□□ 2.93
IRF3-228ENST00000601291 RICTORQ6R327 1708 aa33.37■■■□□ 2.93
IRF3-228ENST00000601291 HECW2Q9P2P5 1572 aa33.37■■■□□ 2.93
IRF3-228ENST00000601291 TRHP20396 242 aaPredicted RBP33.36■■■□□ 2.93
IRF3-228ENST00000601291 MLH3Q9UHC1 1453 aa33.36■■■□□ 2.93
IRF3-228ENST00000601291 RAPGEF3O95398 923 aa33.33■■■□□ 2.93
IRF3-228ENST00000601291 KIDINS220Q9ULH0 1771 aa33.33■■■□□ 2.93
IRF3-228ENST00000601291 ERBINQ96RT1 1412 aa33.32■■■□□ 2.92
IRF3-228ENST00000601291 FRMPD1Q5SYB0 1578 aa33.3■■■□□ 2.92
IRF3-228ENST00000601291 TRIM52Q96A61 297 aa33.3■■■□□ 2.92
IRF3-228ENST00000601291 ZMYM4Q5VZL5 1548 aa33.27■■■□□ 2.92
IRF3-228ENST00000601291 CLSPNQ9HAW4 1339 aa33.25■■■□□ 2.91
IRF3-228ENST00000601291 ZEB1P37275 1124 aaPredicted RBP33.21■■■□□ 2.91
IRF3-228ENST00000601291 MAGI2Q86UL8 1455 aa33.2■■■□□ 2.9
IRF3-228ENST00000601291 DHX29Q7Z478 1369 aaKnown RBP33.19■■■□□ 2.9
IRF3-228ENST00000601291 ABCA6Q8N139 1617 aa33.19■■■□□ 2.9
IRF3-228ENST00000601291 A2MP01023 1474 aa33.18■■■□□ 2.9
IRF3-228ENST00000601291 EIF2AK4Q9P2K8 1649 aaKnown RBP33.17■■■□□ 2.9
IRF3-228ENST00000601291 UNC13BO14795 1591 aa33.17■■■□□ 2.9
IRF3-228ENST00000601291 KDM5DQ9BY66 1539 aa33.16■■■□□ 2.9
IRF3-228ENST00000601291 DIP2CQ9Y2E4 1556 aa33.15■■■□□ 2.9
IRF3-228ENST00000601291 COL17A1Q9UMD9 1497 aaPredicted RBP33.15■■■□□ 2.9
IRF3-228ENST00000601291 NUP155O75694 1391 aa33.13■■■□□ 2.89
IRF3-228ENST00000601291 MPHOSPH9Q99550 1183 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms