RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 CDC42BPBQ9Y5S2 1711 aa23.22■■□□□ 1.31
PPFIA4-212ENST00000600447 ARHGAP5Q13017 1502 aa23.22■■□□□ 1.31
PPFIA4-212ENST00000600447 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
PPFIA4-212ENST00000600447 PREX2Q70Z35 1606 aa23.2■■□□□ 1.3
PPFIA4-212ENST00000600447 MAGI2Q86UL8 1455 aa23.2■■□□□ 1.3
PPFIA4-212ENST00000600447 ADAMTSL3P82987 1691 aa23.18■■□□□ 1.3
PPFIA4-212ENST00000600447 ZFYVE16Q7Z3T8 1539 aa23.18■■□□□ 1.3
PPFIA4-212ENST00000600447 BCORL1Q5H9F3 1711 aa23.16■■□□□ 1.3
PPFIA4-212ENST00000600447 CDC42BPAQ5VT25 1732 aa23.16■■□□□ 1.3
PPFIA4-212ENST00000600447 YEATS2Q9ULM3 1422 aa23.14■■□□□ 1.29
PPFIA4-212ENST00000600447 ZNF518AQ6AHZ1 1483 aa23.13■■□□□ 1.29
PPFIA4-212ENST00000600447 ARID4BQ4LE39 1312 aaPredicted RBP23.11■■□□□ 1.29
PPFIA4-212ENST00000600447 KDM5CP41229 1560 aa23.1■■□□□ 1.29
PPFIA4-212ENST00000600447 SIGLEC1Q9BZZ2 1709 aa23.09■■□□□ 1.29
PPFIA4-212ENST00000600447 LOC105371045A0A1W2PR82 267 aa23.09■■□□□ 1.29
PPFIA4-212ENST00000600447 ABCC1P33527 1531 aa23.08■■□□□ 1.29
PPFIA4-212ENST00000600447 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.29
PPFIA4-212ENST00000600447 MADDQ8WXG6 1647 aa23.08■■□□□ 1.28
PPFIA4-212ENST00000600447 MTUS2Q5JR59 1369 aa23.06■■□□□ 1.28
PPFIA4-212ENST00000600447 HECW2Q9P2P5 1572 aa23.06■■□□□ 1.28
PPFIA4-212ENST00000600447 ATP10AO60312 1499 aa23.05■■□□□ 1.28
PPFIA4-212ENST00000600447 PTPRMP28827 1452 aa23.05■■□□□ 1.28
PPFIA4-212ENST00000600447 GPATCH8Q9UKJ3 1502 aaKnown RBP23.05■■□□□ 1.28
PPFIA4-212ENST00000600447 AFAP1Q8N556 730 aa23.05■■□□□ 1.28
PPFIA4-212ENST00000600447 EHBP1L1Q8N3D4 1523 aa23.03■■□□□ 1.28
PPFIA4-212ENST00000600447 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
PPFIA4-212ENST00000600447 C9orf84Q5VXU9 1444 aa23.02■■□□□ 1.28
PPFIA4-212ENST00000600447 SAMD9LQ8IVG5 1584 aa23.01■■□□□ 1.27
PPFIA4-212ENST00000600447 MLH3Q9UHC1 1453 aa23.01■■□□□ 1.27
PPFIA4-212ENST00000600447 TRAPPC8Q9Y2L5 1435 aa23■■□□□ 1.27
PPFIA4-212ENST00000600447 RIMS1Q86UR5 1692 aaKnown RBP23■■□□□ 1.27
PPFIA4-212ENST00000600447 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
PPFIA4-212ENST00000600447 DIP2CQ9Y2E4 1556 aa22.99■■□□□ 1.27
PPFIA4-212ENST00000600447 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
PPFIA4-212ENST00000600447 TIAM1Q13009 1591 aa22.97■■□□□ 1.27
PPFIA4-212ENST00000600447 REREQ9P2R6 1566 aa22.97■■□□□ 1.27
PPFIA4-212ENST00000600447 ABCA6Q8N139 1617 aa22.97■■□□□ 1.27
PPFIA4-212ENST00000600447 ZNF777Q9ULD5 760 aaPredicted RBP22.96■■□□□ 1.27
PPFIA4-212ENST00000600447 SYCP2Q9BX26 1530 aa22.96■■□□□ 1.27
PPFIA4-212ENST00000600447 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
PPFIA4-212ENST00000600447 PLEKHH2Q8IVE3 1493 aa22.95■■□□□ 1.26
PPFIA4-212ENST00000600447 CFDP1Q9UEE9 299 aaPredicted RBP22.95■■□□□ 1.26
PPFIA4-212ENST00000600447 KIDINS220Q9ULH0 1771 aa22.95■■□□□ 1.26
PPFIA4-212ENST00000600447 MYT1LQ9UL68 1186 aa22.94■■□□□ 1.26
PPFIA4-212ENST00000600447 KIAA1107Q9UPP5 1409 aa22.93■■□□□ 1.26
PPFIA4-212ENST00000600447 SUPT6HQ7KZ85 1726 aaKnown RBP22.92■■□□□ 1.26
PPFIA4-212ENST00000600447 MLECQ14165 292 aa22.9■■□□□ 1.26
PPFIA4-212ENST00000600447 HNRNPMP52272 730 aaKnown RBP eCLIP22.89■■□□□ 1.25
PPFIA4-212ENST00000600447 AGLP35573 1532 aa22.87■■□□□ 1.25
PPFIA4-212ENST00000600447 NCOA2Q15596 1464 aa22.87■■□□□ 1.25
PPFIA4-212ENST00000600447 MAP3K1Q13233 1512 aa22.86■■□□□ 1.25
PPFIA4-212ENST00000600447 SPAG9O60271 1321 aaKnown RBP22.85■■□□□ 1.25
PPFIA4-212ENST00000600447 LRRC9Q6ZRR7 1453 aa22.85■■□□□ 1.25
PPFIA4-212ENST00000600447 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
PPFIA4-212ENST00000600447 ATP7AQ04656 1500 aa22.84■■□□□ 1.25
PPFIA4-212ENST00000600447 ZNF644Q9H582 1327 aaPredicted RBP22.82■■□□□ 1.24
PPFIA4-212ENST00000600447 LMTK3Q96Q04 1460 aa22.8■■□□□ 1.24
PPFIA4-212ENST00000600447 MBD5Q9P267 1494 aa22.8■■□□□ 1.24
PPFIA4-212ENST00000600447 CAMSAP2Q08AD1 1489 aa22.77■■□□□ 1.24
PPFIA4-212ENST00000600447 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
PPFIA4-212ENST00000600447 ADGBQ8N7X0 1667 aa22.76■■□□□ 1.23
PPFIA4-212ENST00000600447 PLXNC1O60486 1568 aa22.76■■□□□ 1.23
PPFIA4-212ENST00000600447 KANK4Q5T7N3 995 aaPredicted RBP22.74■■□□□ 1.23
PPFIA4-212ENST00000600447 RTEL1-TNFRSF6BF6WH68 1400 aa22.74■■□□□ 1.23
PPFIA4-212ENST00000600447 A2MP01023 1474 aa22.73■■□□□ 1.23
PPFIA4-212ENST00000600447 SETD1BQ9UPS6 1966 aaKnown RBP22.72■■□□□ 1.23
PPFIA4-212ENST00000600447 CCDC141Q6ZP82 1450 aa22.72■■□□□ 1.23
PPFIA4-212ENST00000600447 C3P01024 1663 aa22.71■■□□□ 1.23
PPFIA4-212ENST00000600447 PREX1Q8TCU6 1659 aa22.71■■□□□ 1.23
PPFIA4-212ENST00000600447 ARHGEF5Q12774 1597 aa22.71■■□□□ 1.23
PPFIA4-212ENST00000600447 CEBPAP49715 358 aaPredicted RBP22.7■■□□□ 1.22
PPFIA4-212ENST00000600447 RSPH4AQ5TD94 716 aa22.7■■□□□ 1.22
PPFIA4-212ENST00000600447 ESF1Q9H501 851 aaKnown RBP22.7■■□□□ 1.22
PPFIA4-212ENST00000600447 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
PPFIA4-212ENST00000600447 MROH2AA6NES4 1674 aa22.68■■□□□ 1.22
PPFIA4-212ENST00000600447 MYOM3Q5VTT5 1437 aa22.66■■□□□ 1.22
PPFIA4-212ENST00000600447 APLP2Q06481 763 aa22.66■■□□□ 1.22
PPFIA4-212ENST00000600447 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
PPFIA4-212ENST00000600447 HSPA2P54652 639 aa22.63■■□□□ 1.21
PPFIA4-212ENST00000600447 DHX29Q7Z478 1369 aaKnown RBP22.63■■□□□ 1.21
PPFIA4-212ENST00000600447 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
PPFIA4-212ENST00000600447 UHRF1BP1Q6BDS2 1440 aa22.59■■□□□ 1.21
PPFIA4-212ENST00000600447 TSPY4P0CV99 314 aa22.59■■□□□ 1.21
PPFIA4-212ENST00000600447 TSPY10P0CW01 314 aa22.59■■□□□ 1.21
PPFIA4-212ENST00000600447 MAST1Q9Y2H9 1570 aa22.59■■□□□ 1.21
PPFIA4-212ENST00000600447 PPP6R1Q9UPN7 881 aa22.58■■□□□ 1.21
PPFIA4-212ENST00000600447 GGT6Q6P531 493 aa22.57■■□□□ 1.2
PPFIA4-212ENST00000600447 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
PPFIA4-212ENST00000600447 NPATQ14207 1427 aa22.56■■□□□ 1.2
PPFIA4-212ENST00000600447 PTPN23Q9H3S7 1636 aa22.53■■□□□ 1.2
PPFIA4-212ENST00000600447 ILDR1Q86SU0 546 aaPredicted RBP22.52■■□□□ 1.2
PPFIA4-212ENST00000600447 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.19
PPFIA4-212ENST00000600447 CROCC2H7BZ55 1655 aa22.5■■□□□ 1.19
PPFIA4-212ENST00000600447 KIF3BO15066 747 aa22.5■■□□□ 1.19
PPFIA4-212ENST00000600447 STRCQ7RTU9 1775 aa22.5■■□□□ 1.19
PPFIA4-212ENST00000600447 FGD6Q6ZV73 1430 aa22.49■■□□□ 1.19
PPFIA4-212ENST00000600447 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
PPFIA4-212ENST00000600447 TCOF1Q13428 1488 aaKnown RBP22.47■■□□□ 1.19
PPFIA4-212ENST00000600447 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
PPFIA4-212ENST00000600447 KDM5DQ9BY66 1539 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms