RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
PPFIA4-212ENST00000600447 CCDC180Q9P1Z9 1646 aa31.87■■■□□ 2.69
PPFIA4-212ENST00000600447 ABCC9O60706 1549 aa31.41■■■□□ 2.62
PPFIA4-212ENST00000600447 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
PPFIA4-212ENST00000600447 NACADO15069 1562 aa30.02■■■□□ 2.4
PPFIA4-212ENST00000600447 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
PPFIA4-212ENST00000600447 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
PPFIA4-212ENST00000600447 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
PPFIA4-212ENST00000600447 UNC13AQ9UPW8 1703 aa29.49■■■□□ 2.31
PPFIA4-212ENST00000600447 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
PPFIA4-212ENST00000600447 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
PPFIA4-212ENST00000600447 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
PPFIA4-212ENST00000600447 DNAJC5BQ9UF47 199 aa29.13■■■□□ 2.25
PPFIA4-212ENST00000600447 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
PPFIA4-212ENST00000600447 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
PPFIA4-212ENST00000600447 EIF4G1Q04637 1599 aaKnown RBP28.47■■■□□ 2.15
PPFIA4-212ENST00000600447 CC2D2AQ9P2K1 1620 aa28.44■■■□□ 2.14
PPFIA4-212ENST00000600447 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
PPFIA4-212ENST00000600447 SMARCA4P51532 1647 aa27.73■■■□□ 2.03
PPFIA4-212ENST00000600447 NCAPD3P42695 1498 aa27.68■■■□□ 2.02
PPFIA4-212ENST00000600447 BAZ1AQ9NRL2 1556 aaPredicted RBP27.64■■■□□ 2.01
PPFIA4-212ENST00000600447 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.01
PPFIA4-212ENST00000600447 SMARCA2P51531 1590 aa27.61■■■□□ 2.01
PPFIA4-212ENST00000600447 HMGXB3Q12766 1538 aa27.54■■■□□ 2
PPFIA4-212ENST00000600447 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
PPFIA4-212ENST00000600447 MROH2BQ7Z745 1585 aa27.43■■□□□ 1.98
PPFIA4-212ENST00000600447 BAZ1BQ9UIG0 1483 aaKnown RBP27.39■■□□□ 1.98
PPFIA4-212ENST00000600447 WIZO95785 1651 aa27.14■■□□□ 1.94
PPFIA4-212ENST00000600447 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
PPFIA4-212ENST00000600447 NESP48681 1621 aa27.09■■□□□ 1.93
PPFIA4-212ENST00000600447 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
PPFIA4-212ENST00000600447 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
PPFIA4-212ENST00000600447 CUX2O14529 1486 aa26.98■■□□□ 1.91
PPFIA4-212ENST00000600447 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
PPFIA4-212ENST00000600447 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
PPFIA4-212ENST00000600447 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
PPFIA4-212ENST00000600447 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
PPFIA4-212ENST00000600447 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
PPFIA4-212ENST00000600447 CFTRP13569 1480 aa26.62■■□□□ 1.85
PPFIA4-212ENST00000600447 MRC2Q9UBG0 1479 aa26.57■■□□□ 1.84
PPFIA4-212ENST00000600447 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
PPFIA4-212ENST00000600447 CEP164Q9UPV0 1460 aa26.54■■□□□ 1.84
PPFIA4-212ENST00000600447 WDR62O43379 1518 aa26.51■■□□□ 1.83
PPFIA4-212ENST00000600447 DNAJC5Q9H3Z4 198 aa26.51■■□□□ 1.83
PPFIA4-212ENST00000600447 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
PPFIA4-212ENST00000600447 PRDM2Q13029 1718 aa26.48■■□□□ 1.83
PPFIA4-212ENST00000600447 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
PPFIA4-212ENST00000600447 TOPBP1Q92547 1522 aa26.09■■□□□ 1.77
PPFIA4-212ENST00000600447 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
PPFIA4-212ENST00000600447 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
PPFIA4-212ENST00000600447 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
PPFIA4-212ENST00000600447 IFT140Q96RY7 1462 aa26■■□□□ 1.75
PPFIA4-212ENST00000600447 ZNF608Q9ULD9 1512 aaPredicted RBP25.89■■□□□ 1.74
PPFIA4-212ENST00000600447 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
PPFIA4-212ENST00000600447 POLA1P09884 1462 aaPredicted RBP25.84■■□□□ 1.73
PPFIA4-212ENST00000600447 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
PPFIA4-212ENST00000600447 OSCARQ8IYS5 282 aa25.76■■□□□ 1.71
PPFIA4-212ENST00000600447 CUX1P39880 1505 aa25.76■■□□□ 1.71
PPFIA4-212ENST00000600447 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
PPFIA4-212ENST00000600447 SOGA1O94964 1423 aa25.71■■□□□ 1.71
PPFIA4-212ENST00000600447 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.71
PPFIA4-212ENST00000600447 RAD54L2Q9Y4B4 1467 aa25.71■■□□□ 1.71
PPFIA4-212ENST00000600447 WDR97A6NE52 1622 aa25.65■■□□□ 1.7
PPFIA4-212ENST00000600447 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
PPFIA4-212ENST00000600447 CHD1O14646 1710 aa25.57■■□□□ 1.68
PPFIA4-212ENST00000600447 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
PPFIA4-212ENST00000600447 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
PPFIA4-212ENST00000600447 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
PPFIA4-212ENST00000600447 GRIN2BQ13224 1484 aa25.47■■□□□ 1.67
PPFIA4-212ENST00000600447 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
PPFIA4-212ENST00000600447 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
PPFIA4-212ENST00000600447 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
PPFIA4-212ENST00000600447 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
PPFIA4-212ENST00000600447 SYNJ1O43426 1573 aa25.44■■□□□ 1.66
PPFIA4-212ENST00000600447 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
PPFIA4-212ENST00000600447 FBLN2P98095 1184 aa25.43■■□□□ 1.66
PPFIA4-212ENST00000600447 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
PPFIA4-212ENST00000600447 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
PPFIA4-212ENST00000600447 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
PPFIA4-212ENST00000600447 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
PPFIA4-212ENST00000600447 GAPVD1Q14C86 1478 aa25.41■■□□□ 1.66
PPFIA4-212ENST00000600447 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
PPFIA4-212ENST00000600447 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
PPFIA4-212ENST00000600447 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.65
PPFIA4-212ENST00000600447 CLASP1Q7Z460 1538 aa25.27■■□□□ 1.64
PPFIA4-212ENST00000600447 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
PPFIA4-212ENST00000600447 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
PPFIA4-212ENST00000600447 GRIN2AQ12879 1464 aa25.14■■□□□ 1.61
PPFIA4-212ENST00000600447 ARAP1Q96P48 1450 aa25.14■■□□□ 1.61
PPFIA4-212ENST00000600447 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
PPFIA4-212ENST00000600447 CYB5RLQ6IPT4 315 aa25.11■■□□□ 1.61
PPFIA4-212ENST00000600447 CEP170Q5SW79 1584 aa25.04■■□□□ 1.6
PPFIA4-212ENST00000600447 NUP160Q12769 1436 aa25.03■■□□□ 1.6
PPFIA4-212ENST00000600447 KIF27Q86VH2 1401 aa24.95■■□□□ 1.59
PPFIA4-212ENST00000600447 SHROOM2Q13796 1616 aa24.93■■□□□ 1.58
PPFIA4-212ENST00000600447 IGF1RP08069 1367 aa24.9■■□□□ 1.58
PPFIA4-212ENST00000600447 CUL7Q14999 1698 aa24.89■■□□□ 1.58
PPFIA4-212ENST00000600447 ERCC6L2Q5T890 1561 aa24.87■■□□□ 1.57
PPFIA4-212ENST00000600447 RUSC2Q8N2Y8 1516 aa24.82■■□□□ 1.56
PPFIA4-212ENST00000600447 JPH4Q96JJ6 628 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms