RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 JPH4Q96JJ6 628 aa18.65■□□□□ 0.58
SYMPK-215ENST00000600237 FANCD2Q9BXW9 1451 aa18.63■□□□□ 0.57
SYMPK-215ENST00000600237 PKD2Q13563 968 aa18.63■□□□□ 0.57
SYMPK-215ENST00000600237 U2SURPO15042 1029 aaKnown RBP18.63■□□□□ 0.57
SYMPK-215ENST00000600237 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
SYMPK-215ENST00000600237 RBM19Q9Y4C8 960 aaKnown RBP18.62■□□□□ 0.57
SYMPK-215ENST00000600237 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
SYMPK-215ENST00000600237 ANKRD30AQ9BXX3 1397 aa18.6■□□□□ 0.57
SYMPK-215ENST00000600237 RAB3GAP2Q9H2M9 1393 aa18.6■□□□□ 0.57
SYMPK-215ENST00000600237 KTN1Q86UP2 1357 aaKnown RBP18.6■□□□□ 0.57
SYMPK-215ENST00000600237 DNTTIP2Q5QJE6 756 aaKnown RBP18.59■□□□□ 0.57
SYMPK-215ENST00000600237 CFAP44Q96MT7 982 aa18.57■□□□□ 0.56
SYMPK-215ENST00000600237 FHOD3Q2V2M9 1422 aa18.57■□□□□ 0.56
SYMPK-215ENST00000600237 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
SYMPK-215ENST00000600237 HSCBQ8IWL3 235 aa18.56■□□□□ 0.56
SYMPK-215ENST00000600237 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
SYMPK-215ENST00000600237 RALBP1Q15311 655 aa18.56■□□□□ 0.56
SYMPK-215ENST00000600237 NUP155O75694 1391 aa18.56■□□□□ 0.56
SYMPK-215ENST00000600237 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
SYMPK-215ENST00000600237 NAP1L5Q96NT1 182 aaPredicted RBP18.53■□□□□ 0.56
SYMPK-215ENST00000600237 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
SYMPK-215ENST00000600237 CCDC18Q5T9S5 1454 aa18.52■□□□□ 0.56
SYMPK-215ENST00000600237 L1TD1Q5T7N2 865 aaKnown RBP18.52■□□□□ 0.56
SYMPK-215ENST00000600237 KIF3BO15066 747 aa18.52■□□□□ 0.56
SYMPK-215ENST00000600237 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.55
SYMPK-215ENST00000600237 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
SYMPK-215ENST00000600237 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
SYMPK-215ENST00000600237 HNRNPMP52272 730 aaKnown RBP eCLIP18.51■□□□□ 0.55
SYMPK-215ENST00000600237 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
SYMPK-215ENST00000600237 OS9Q13438 667 aaPredicted RBP18.49■□□□□ 0.55
SYMPK-215ENST00000600237 FOXD1Q16676 465 aa18.49■□□□□ 0.55
SYMPK-215ENST00000600237 IPO8O15397 1037 aaKnown RBP18.49■□□□□ 0.55
SYMPK-215ENST00000600237 STK26Q9P289 416 aa18.48■□□□□ 0.55
SYMPK-215ENST00000600237 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
SYMPK-215ENST00000600237 KCNJ4P48050 445 aa18.47■□□□□ 0.55
SYMPK-215ENST00000600237 FGD1P98174 961 aa18.47■□□□□ 0.55
SYMPK-215ENST00000600237 NRDCO43847 1150 aa18.46■□□□□ 0.55
SYMPK-215ENST00000600237 MCCP23508 829 aa18.46■□□□□ 0.55
SYMPK-215ENST00000600237 RTN4Q9NQC3 1192 aaKnown RBP18.46■□□□□ 0.55
SYMPK-215ENST00000600237 PTPRGP23470 1445 aa18.46■□□□□ 0.54
SYMPK-215ENST00000600237 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
SYMPK-215ENST00000600237 GOLGA6L6A8MZA4 724 aa18.45■□□□□ 0.54
SYMPK-215ENST00000600237 PLCB2Q00722 1185 aa18.45■□□□□ 0.54
SYMPK-215ENST00000600237 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
SYMPK-215ENST00000600237 TPRNQ4KMQ1 711 aa18.43■□□□□ 0.54
SYMPK-215ENST00000600237 HDGFL2Q7Z4V5 671 aaPredicted RBP18.43■□□□□ 0.54
SYMPK-215ENST00000600237 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
SYMPK-215ENST00000600237 PDE3BQ13370 1112 aa18.42■□□□□ 0.54
SYMPK-215ENST00000600237 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
SYMPK-215ENST00000600237 GOLGA6L4A6NEF3 574 aa18.42■□□□□ 0.54
SYMPK-215ENST00000600237 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
SYMPK-215ENST00000600237 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
SYMPK-215ENST00000600237 SOX12O15370 315 aa18.41■□□□□ 0.54
SYMPK-215ENST00000600237 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
SYMPK-215ENST00000600237 PTMSP20962 102 aa18.4■□□□□ 0.54
SYMPK-215ENST00000600237 L3MBTL2Q969R5 705 aa18.4■□□□□ 0.54
SYMPK-215ENST00000600237 TSHZ2Q9NRE2 1034 aa18.39■□□□□ 0.53
SYMPK-215ENST00000600237 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
SYMPK-215ENST00000600237 FGD5Q6ZNL6 1462 aa18.38■□□□□ 0.53
SYMPK-215ENST00000600237 EIF3AQ14152 1382 aaKnown RBP18.37■□□□□ 0.53
SYMPK-215ENST00000600237 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
SYMPK-215ENST00000600237 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
SYMPK-215ENST00000600237 CYB5RLQ6IPT4 315 aa18.37■□□□□ 0.53
SYMPK-215ENST00000600237 GBP4Q96PP9 640 aa18.37■□□□□ 0.53
SYMPK-215ENST00000600237 MSNP26038 577 aaKnown RBP18.37■□□□□ 0.53
SYMPK-215ENST00000600237 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
SYMPK-215ENST00000600237 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
SYMPK-215ENST00000600237 CHAF1AQ13111 956 aaPredicted RBP18.36■□□□□ 0.53
SYMPK-215ENST00000600237 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
SYMPK-215ENST00000600237 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
SYMPK-215ENST00000600237 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
SYMPK-215ENST00000600237 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
SYMPK-215ENST00000600237 IGF1RP08069 1367 aa18.33■□□□□ 0.52
SYMPK-215ENST00000600237 IPO9Q96P70 1041 aaKnown RBP18.32■□□□□ 0.52
SYMPK-215ENST00000600237 NPHP1O15259 732 aa18.32■□□□□ 0.52
SYMPK-215ENST00000600237 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
SYMPK-215ENST00000600237 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
SYMPK-215ENST00000600237 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
SYMPK-215ENST00000600237 NAP1L2Q9ULW6 460 aaPredicted RBP18.3■□□□□ 0.52
SYMPK-215ENST00000600237 ITPRIPQ8IWB1 547 aa18.3■□□□□ 0.52
SYMPK-215ENST00000600237 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
SYMPK-215ENST00000600237 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
SYMPK-215ENST00000600237 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
SYMPK-215ENST00000600237 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
SYMPK-215ENST00000600237 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
SYMPK-215ENST00000600237 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
SYMPK-215ENST00000600237 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
SYMPK-215ENST00000600237 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
SYMPK-215ENST00000600237 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
SYMPK-215ENST00000600237 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
SYMPK-215ENST00000600237 CSB-PGBD3P0DP91 1061 aa18.22■□□□□ 0.51
SYMPK-215ENST00000600237 APBB1O00213 710 aa18.22■□□□□ 0.51
SYMPK-215ENST00000600237 SYAP1Q96A49 352 aaPredicted RBP18.22■□□□□ 0.51
SYMPK-215ENST00000600237 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.519e-7■■■■■ 31.3
SYMPK-215ENST00000600237 HMMRO75330 724 aa18.21■□□□□ 0.51
SYMPK-215ENST00000600237 TAOK2Q9UL54 1235 aa18.21■□□□□ 0.51
SYMPK-215ENST00000600237 HDAC5Q9UQL6 1122 aa18.21■□□□□ 0.51
SYMPK-215ENST00000600237 CCDC144AA2RUR9 1427 aa18.21■□□□□ 0.51
SYMPK-215ENST00000600237 STK31Q9BXU1 1019 aa18.2■□□□□ 0.5
SYMPK-215ENST00000600237 DRC7Q8IY82 874 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms