RNA–Protein interactions for RNA: ENST00000599814.5

SYMPK-214, Transcript of symplekin, humanhuman

TSL 2 BASIC

Gene SYMPK, Length 6,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-214ENST00000599814 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.27
SYMPK-214ENST00000599814 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.27
SYMPK-214ENST00000599814 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.27
SYMPK-214ENST00000599814 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
SYMPK-214ENST00000599814 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
SYMPK-214ENST00000599814 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
SYMPK-214ENST00000599814 KRI1Q8N9T8 703 aaKnown RBP16.75■□□□□ 0.27
SYMPK-214ENST00000599814 KIF3BO15066 747 aa16.75■□□□□ 0.27
SYMPK-214ENST00000599814 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
SYMPK-214ENST00000599814 FGD1P98174 961 aa16.74■□□□□ 0.27
SYMPK-214ENST00000599814 NOP58Q9Y2X3 529 aaKnown RBP16.74■□□□□ 0.27
SYMPK-214ENST00000599814 NUDCQ9Y266 331 aa16.74■□□□□ 0.27
SYMPK-214ENST00000599814 ATF3P18847 181 aa16.73■□□□□ 0.27
SYMPK-214ENST00000599814 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
SYMPK-214ENST00000599814 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
SYMPK-214ENST00000599814 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
SYMPK-214ENST00000599814 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
SYMPK-214ENST00000599814 NRDCO43847 1150 aa16.71■□□□□ 0.27
SYMPK-214ENST00000599814 PRM3Q9NNZ6 103 aa16.71■□□□□ 0.27
SYMPK-214ENST00000599814 RTF1Q92541 710 aaKnown RBP16.7■□□□□ 0.26
SYMPK-214ENST00000599814 SOGA1O94964 1423 aa16.7■□□□□ 0.26
SYMPK-214ENST00000599814 LTV1Q96GA3 475 aaPredicted RBP16.7■□□□□ 0.26
SYMPK-214ENST00000599814 CUX2O14529 1486 aa16.69■□□□□ 0.26
SYMPK-214ENST00000599814 HSP90AB1P08238 724 aaKnown RBP16.69■□□□□ 0.26
SYMPK-214ENST00000599814 KCNJ4P48050 445 aa16.69■□□□□ 0.26
SYMPK-214ENST00000599814 HDGFL2Q7Z4V5 671 aaPredicted RBP16.67■□□□□ 0.26
SYMPK-214ENST00000599814 L1TD1Q5T7N2 865 aaKnown RBP16.67■□□□□ 0.26
SYMPK-214ENST00000599814 CWC22Q9HCG8 908 aaKnown RBP16.67■□□□□ 0.26
SYMPK-214ENST00000599814 MSNP26038 577 aaKnown RBP16.66■□□□□ 0.26
SYMPK-214ENST00000599814 CARD11Q9BXL7 1154 aa16.65■□□□□ 0.26
SYMPK-214ENST00000599814 PPP4R2Q9NY27 417 aa16.64■□□□□ 0.25
SYMPK-214ENST00000599814 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
SYMPK-214ENST00000599814 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
SYMPK-214ENST00000599814 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
SYMPK-214ENST00000599814 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
SYMPK-214ENST00000599814 AMER1Q5JTC6 1135 aaPredicted RBP16.6■□□□□ 0.25
SYMPK-214ENST00000599814 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
SYMPK-214ENST00000599814 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
SYMPK-214ENST00000599814 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
SYMPK-214ENST00000599814 FRAT2O75474 233 aaPredicted RBP16.59■□□□□ 0.25
SYMPK-214ENST00000599814 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
SYMPK-214ENST00000599814 FBXW7Q969H0 707 aa16.58■□□□□ 0.25
SYMPK-214ENST00000599814 CHMP4BQ9H444 224 aaKnown RBP16.58■□□□□ 0.25
SYMPK-214ENST00000599814 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
SYMPK-214ENST00000599814 PNNQ9H307 717 aaKnown RBP16.58■□□□□ 0.24
SYMPK-214ENST00000599814 AMPHP49418 695 aa16.57■□□□□ 0.24
SYMPK-214ENST00000599814 HSCBQ8IWL3 235 aa16.57■□□□□ 0.24
SYMPK-214ENST00000599814 PSME1Q06323 249 aa16.56■□□□□ 0.24
SYMPK-214ENST00000599814 RGS3P49796 1198 aa16.56■□□□□ 0.24
SYMPK-214ENST00000599814 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
SYMPK-214ENST00000599814 DEKP35659 375 aaKnown RBP16.55■□□□□ 0.24
SYMPK-214ENST00000599814 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
SYMPK-214ENST00000599814 DRC7Q8IY82 874 aa16.54■□□□□ 0.24
SYMPK-214ENST00000599814 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
SYMPK-214ENST00000599814 MS4A1P11836 297 aa16.53■□□□□ 0.24
SYMPK-214ENST00000599814 GNL2Q13823 731 aaKnown RBP16.53■□□□□ 0.24
SYMPK-214ENST00000599814 PTMSP20962 102 aa16.49■□□□□ 0.23
SYMPK-214ENST00000599814 USP35Q9P2H5 1018 aa16.49■□□□□ 0.23
SYMPK-214ENST00000599814 PROSER2Q86WR7 435 aaPredicted RBP16.48■□□□□ 0.23
SYMPK-214ENST00000599814 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
SYMPK-214ENST00000599814 MCCP23508 829 aa16.47■□□□□ 0.23
SYMPK-214ENST00000599814 MORC1Q86VD1 984 aa16.47■□□□□ 0.23
SYMPK-214ENST00000599814 GORABQ5T7V8 394 aa16.47■□□□□ 0.23
SYMPK-214ENST00000599814 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
SYMPK-214ENST00000599814 PTPRGP23470 1445 aa16.46■□□□□ 0.23
SYMPK-214ENST00000599814 TRIM34Q9BYJ4 488 aa16.45■□□□□ 0.22
SYMPK-214ENST00000599814 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
SYMPK-214ENST00000599814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.45■□□□□ 0.22
SYMPK-214ENST00000599814 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
SYMPK-214ENST00000599814 VPS53Q5VIR6 699 aa16.43■□□□□ 0.22
SYMPK-214ENST00000599814 PDE4CQ08493 712 aa16.43■□□□□ 0.22
SYMPK-214ENST00000599814 TNNT3P45378 269 aaPredicted RBP16.43■□□□□ 0.22
SYMPK-214ENST00000599814 TMF1P82094 1093 aa16.42■□□□□ 0.22
SYMPK-214ENST00000599814 KIAA2012Q0VF49 1180 aa16.42■□□□□ 0.22
SYMPK-214ENST00000599814 APBB1O00213 710 aa16.42■□□□□ 0.22
SYMPK-214ENST00000599814 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
SYMPK-214ENST00000599814 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
SYMPK-214ENST00000599814 STRN4Q9NRL3 753 aa16.4■□□□□ 0.22
SYMPK-214ENST00000599814 RAD21O60216 631 aa16.4■□□□□ 0.22
SYMPK-214ENST00000599814 B4GALNT3Q6L9W6 998 aa16.39■□□□□ 0.22
SYMPK-214ENST00000599814 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
SYMPK-214ENST00000599814 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
SYMPK-214ENST00000599814 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
SYMPK-214ENST00000599814 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
SYMPK-214ENST00000599814 NOC3LQ8WTT2 800 aaKnown RBP16.37■□□□□ 0.21
SYMPK-214ENST00000599814 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
SYMPK-214ENST00000599814 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
SYMPK-214ENST00000599814 CCAR1Q8IX12 1150 aaKnown RBP16.34■□□□□ 0.21
SYMPK-214ENST00000599814 TTC5Q8N0Z6 440 aa16.33■□□□□ 0.2
SYMPK-214ENST00000599814 PKD2Q13563 968 aa16.33■□□□□ 0.2
SYMPK-214ENST00000599814 GOLGA6L1Q8N7Z2 621 aa16.33■□□□□ 0.2
SYMPK-214ENST00000599814 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
SYMPK-214ENST00000599814 ARID3AQ99856 593 aa16.32■□□□□ 0.2
SYMPK-214ENST00000599814 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
SYMPK-214ENST00000599814 SYAP1Q96A49 352 aaPredicted RBP16.31■□□□□ 0.2
SYMPK-214ENST00000599814 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
SYMPK-214ENST00000599814 TPM4P67936 248 aa16.31■□□□□ 0.2
SYMPK-214ENST00000599814 PDE3BQ13370 1112 aa16.31■□□□□ 0.2
SYMPK-214ENST00000599814 RBM19Q9Y4C8 960 aaKnown RBP16.31■□□□□ 0.2
SYMPK-214ENST00000599814 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms