RNA–Protein interactions for RNA: ENST00000597270.1

HNRNPM-208, Transcript of heterogeneous nuclear ribonucleoprotein M, human

TSL 2

Gene HNRNPM, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPM-208	ENST00000597270	TRO	Q12816	1431 aa	Predicted RBP	33.21	■■■□□ 2.91
HNRNPM-208	ENST00000597270	POGZ	Q7Z3K3	1410 aa		33.2	■■■□□ 2.91
HNRNPM-208	ENST00000597270	CLIP1	P30622	1438 aa		33.18	■■■□□ 2.9
HNRNPM-208	ENST00000597270	KIF14	Q15058	1648 aa		33.16	■■■□□ 2.9
HNRNPM-208	ENST00000597270	MYO5C	Q9NQX4	1742 aa		33.15	■■■□□ 2.9
HNRNPM-208	ENST00000597270	MLEC	Q14165	292 aa		33.13	■■■□□ 2.89
HNRNPM-208	ENST00000597270	PLPPR3	Q6T4P5	718 aa		33.11	■■■□□ 2.89
HNRNPM-208	ENST00000597270	RIMS1	Q86UR5	1692 aa	Known RBP	33.1	■■■□□ 2.89
HNRNPM-208	ENST00000597270	ARHGAP5	Q13017	1502 aa		33.09	■■■□□ 2.89
HNRNPM-208	ENST00000597270	CASKIN1	Q8WXD9	1431 aa		33.09	■■■□□ 2.89
HNRNPM-208	ENST00000597270	LRRIQ1	Q96JM4	1722 aa		33.07	■■■□□ 2.88
HNRNPM-208	ENST00000597270	ATP10A	O60312	1499 aa		33.06	■■■□□ 2.88
HNRNPM-208	ENST00000597270	SIGLEC1	Q9BZZ2	1709 aa		33.05	■■■□□ 2.88
HNRNPM-208	ENST00000597270	AFAP1	Q8N556	730 aa		33.05	■■■□□ 2.88
HNRNPM-208	ENST00000597270	PCF11	O94913	1555 aa	Known RBP	33.04	■■■□□ 2.88
HNRNPM-208	ENST00000597270	CCDC18	Q5T9S5	1454 aa		33.04	■■■□□ 2.88
HNRNPM-208	ENST00000597270	MYT1L	Q9UL68	1186 aa		33.03	■■■□□ 2.88
HNRNPM-208	ENST00000597270	ZNF518A	Q6AHZ1	1483 aa		33.03	■■■□□ 2.88
HNRNPM-208	ENST00000597270	LMTK3	Q96Q04	1460 aa		33.02	■■■□□ 2.88
HNRNPM-208	ENST00000597270	C9orf84	Q5VXU9	1444 aa		33.02	■■■□□ 2.88
HNRNPM-208	ENST00000597270	HSPA2	P54652	639 aa		32.93	■■■□□ 2.86
HNRNPM-208	ENST00000597270	FYCO1	Q9BQS8	1478 aa		32.93	■■■□□ 2.86
HNRNPM-208	ENST00000597270	KDM5C	P41229	1560 aa		32.92	■■■□□ 2.86
HNRNPM-208	ENST00000597270	CDC42BPB	Q9Y5S2	1711 aa		32.92	■■■□□ 2.86
HNRNPM-208	ENST00000597270	ARHGEF12	Q9NZN5	1544 aa		32.9	■■■□□ 2.86
HNRNPM-208	ENST00000597270	FER1L4	A9Z1Z3	1794 aa		32.9	■■■□□ 2.86
HNRNPM-208	ENST00000597270	PREX2	Q70Z35	1606 aa		32.88	■■■□□ 2.85
HNRNPM-208	ENST00000597270	TRAPPC8	Q9Y2L5	1435 aa		32.86	■■■□□ 2.85
HNRNPM-208	ENST00000597270	MLH3	Q9UHC1	1453 aa		32.85	■■■□□ 2.85
HNRNPM-208	ENST00000597270	CEBPA	P49715	358 aa	Predicted RBP	32.84	■■■□□ 2.85
HNRNPM-208	ENST00000597270	ABCC1	P33527	1531 aa		32.83	■■■□□ 2.85
HNRNPM-208	ENST00000597270	FBXO41	Q8TF61	875 aa		32.83	■■■□□ 2.85
HNRNPM-208	ENST00000597270	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.83	■■■□□ 2.85
HNRNPM-208	ENST00000597270	DIP2C	Q9Y2E4	1556 aa		32.82	■■■□□ 2.84
HNRNPM-208	ENST00000597270	CDC42BPA	Q5VT25	1732 aa		32.77	■■■□□ 2.84
HNRNPM-208	ENST00000597270	ABCA6	Q8N139	1617 aa		32.76	■■■□□ 2.83
HNRNPM-208	ENST00000597270	ITSN2	Q9NZM3	1697 aa		32.75	■■■□□ 2.83
HNRNPM-208	ENST00000597270	RERE	Q9P2R6	1566 aa		32.75	■■■□□ 2.83
HNRNPM-208	ENST00000597270	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.74	■■■□□ 2.83
HNRNPM-208	ENST00000597270	ESF1	Q9H501	851 aa	Known RBP	32.72	■■■□□ 2.83
HNRNPM-208	ENST00000597270	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.71	■■■□□ 2.83	8e-8	■■■■■ 39.2
HNRNPM-208	ENST00000597270	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.7	■■■□□ 2.83
HNRNPM-208	ENST00000597270	MTUS2	Q5JR59	1369 aa		32.69	■■■□□ 2.82
HNRNPM-208	ENST00000597270	AGL	P35573	1532 aa		32.68	■■■□□ 2.82
HNRNPM-208	ENST00000597270	CCNB3	Q8WWL7	1395 aa		32.68	■■■□□ 2.82
HNRNPM-208	ENST00000597270	SPAG9	O60271	1321 aa	Known RBP	32.67	■■■□□ 2.82
HNRNPM-208	ENST00000597270	SAMD9L	Q8IVG5	1584 aa		32.66	■■■□□ 2.82
HNRNPM-208	ENST00000597270	KIDINS220	Q9ULH0	1771 aa		32.66	■■■□□ 2.82
HNRNPM-208	ENST00000597270	PREX1	Q8TCU6	1659 aa		32.64	■■■□□ 2.82
HNRNPM-208	ENST00000597270	SYCP2	Q9BX26	1530 aa		32.64	■■■□□ 2.82
HNRNPM-208	ENST00000597270	UHRF1BP1	Q6BDS2	1440 aa		32.6	■■■□□ 2.81
HNRNPM-208	ENST00000597270	KIAA1107	Q9UPP5	1409 aa		32.6	■■■□□ 2.81
HNRNPM-208	ENST00000597270	PLEKHH2	Q8IVE3	1493 aa		32.59	■■■□□ 2.81
HNRNPM-208	ENST00000597270	CEP162	Q5TB80	1403 aa		32.57	■■■□□ 2.8
HNRNPM-208	ENST00000597270	SETD1B	Q9UPS6	1966 aa	Known RBP	32.56	■■■□□ 2.8
HNRNPM-208	ENST00000597270	CNTLN	Q9NXG0	1405 aa		32.54	■■■□□ 2.8
HNRNPM-208	ENST00000597270	CERK	Q8TCT0	537 aa		32.53	■■■□□ 2.8
HNRNPM-208	ENST00000597270	DMRT2	Q9Y5R5	561 aa		32.53	■■■□□ 2.8
HNRNPM-208	ENST00000597270	C3	P01024	1663 aa		32.53	■■■□□ 2.8
HNRNPM-208	ENST00000597270	ATP7A	Q04656	1500 aa		32.51	■■■□□ 2.79
HNRNPM-208	ENST00000597270	ZNF644	Q9H582	1327 aa	Predicted RBP	32.51	■■■□□ 2.79
HNRNPM-208	ENST00000597270	EHBP1L1	Q8N3D4	1523 aa		32.48	■■■□□ 2.79
HNRNPM-208	ENST00000597270	A2M	P01023	1474 aa		32.45	■■■□□ 2.79
HNRNPM-208	ENST00000597270	TIAM1	Q13009	1591 aa		32.45	■■■□□ 2.78
HNRNPM-208	ENST00000597270	INO80	Q9ULG1	1556 aa	Predicted RBP	32.44	■■■□□ 2.78
HNRNPM-208	ENST00000597270	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.43	■■■□□ 2.78
HNRNPM-208	ENST00000597270	ZMYM3	Q14202	1370 aa		32.43	■■■□□ 2.78
HNRNPM-208	ENST00000597270	STRC	Q7RTU9	1775 aa		32.41	■■■□□ 2.78
HNRNPM-208	ENST00000597270	GGT6	Q6P531	493 aa		32.41	■■■□□ 2.78
HNRNPM-208	ENST00000597270	MBD5	Q9P267	1494 aa		32.39	■■■□□ 2.78
HNRNPM-208	ENST00000597270	PLXNC1	O60486	1568 aa		32.37	■■■□□ 2.77
HNRNPM-208	ENST00000597270	NPAT	Q14207	1427 aa		32.37	■■■□□ 2.77
HNRNPM-208	ENST00000597270	MROH2A	A6NES4	1674 aa		32.34	■■■□□ 2.77
HNRNPM-208	ENST00000597270	LOC105371045	A0A1W2PR82	267 aa		32.34	■■■□□ 2.77
HNRNPM-208	ENST00000597270	NCOA2	Q15596	1464 aa		32.33	■■■□□ 2.77
HNRNPM-208	ENST00000597270	PTPRT	O14522	1441 aa		32.33	■■■□□ 2.77
HNRNPM-208	ENST00000597270	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.32	■■■□□ 2.76
HNRNPM-208	ENST00000597270	PPP6R1	Q9UPN7	881 aa		32.31	■■■□□ 2.76
HNRNPM-208	ENST00000597270	CLTC	Q00610	1675 aa	Known RBP	32.29	■■■□□ 2.76
HNRNPM-208	ENST00000597270	ADGB	Q8N7X0	1667 aa		32.29	■■■□□ 2.76
HNRNPM-208	ENST00000597270	NCOA1	Q15788	1441 aa		32.27	■■■□□ 2.76
HNRNPM-208	ENST00000597270	RSPH4A	Q5TD94	716 aa		32.27	■■■□□ 2.76
HNRNPM-208	ENST00000597270	DHX29	Q7Z478	1369 aa	Known RBP	32.27	■■■□□ 2.76
HNRNPM-208	ENST00000597270	PTPRK	Q15262	1439 aa		32.24	■■■□□ 2.75
HNRNPM-208	ENST00000597270	CAMSAP2	Q08AD1	1489 aa		32.23	■■■□□ 2.75
HNRNPM-208	ENST00000597270	CCDC141	Q6ZP82	1450 aa		32.23	■■■□□ 2.75
HNRNPM-208	ENST00000597270	VPS8	Q8N3P4	1428 aa		32.23	■■■□□ 2.75
HNRNPM-208	ENST00000597270	KIF3B	O15066	747 aa		32.21	■■■□□ 2.75
HNRNPM-208	ENST00000597270	CAMSAP1	Q5T5Y3	1602 aa		32.21	■■■□□ 2.75
HNRNPM-208	ENST00000597270	NCKAP5L	Q9HCH0	1330 aa		32.18	■■■□□ 2.74
HNRNPM-208	ENST00000597270	TSPY4	P0CV99	314 aa		32.17	■■■□□ 2.74
HNRNPM-208	ENST00000597270	TSPY10	P0CW01	314 aa		32.17	■■■□□ 2.74
HNRNPM-208	ENST00000597270	LRRC9	Q6ZRR7	1453 aa		32.16	■■■□□ 2.74
HNRNPM-208	ENST00000597270	MYO3A	Q8NEV4	1616 aa		32.12	■■■□□ 2.73
HNRNPM-208	ENST00000597270	PKD2	Q13563	968 aa		32.11	■■■□□ 2.73
HNRNPM-208	ENST00000597270	KANK4	Q5T7N3	995 aa	Predicted RBP	32.11	■■■□□ 2.73
HNRNPM-208	ENST00000597270	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.1	■■■□□ 2.73
HNRNPM-208	ENST00000597270	ARHGEF5	Q12774	1597 aa		32.09	■■■□□ 2.73
HNRNPM-208	ENST00000597270	LTBP4	Q8N2S1	1624 aa		32.08	■■■□□ 2.73
HNRNPM-208	ENST00000597270	WASHC2C	Q9Y4E1	1318 aa		32.08	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms