RNA–Protein interactions for RNA: ENST00000597270.1

HNRNPM-208, Transcript of heterogeneous nuclear ribonucleoprotein M, humanhuman

TSL 2

Gene HNRNPM, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPM-208ENST00000597270 NISCHQ9Y2I1 1504 aa50.66■■■■■ 5.7
HNRNPM-208ENST00000597270 ABCC9O60706 1549 aa45.45■■■■■ 4.87
HNRNPM-208ENST00000597270 CCDC180Q9P1Z9 1646 aa45.35■■■■■ 4.85
HNRNPM-208ENST00000597270 RB1CC1Q8TDY2 1594 aa43.22■■■■■ 4.51
HNRNPM-208ENST00000597270 NACADO15069 1562 aa42.94■■■■■ 4.46
HNRNPM-208ENST00000597270 DCAF8L2P0C7V8 631 aa42.92■■■■■ 4.46
HNRNPM-208ENST00000597270 DNAJC5BQ9UF47 199 aa42.64■■■■■ 4.42
HNRNPM-208ENST00000597270 PABPN1Q86U42 306 aaKnown RBP eCLIP42.39■■■■■ 4.38
HNRNPM-208ENST00000597270 MYO15BQ96JP2 1530 aa42.34■■■■■ 4.37
HNRNPM-208ENST00000597270 UNC13AQ9UPW8 1703 aa42.14■■■■■ 4.34
HNRNPM-208ENST00000597270 ZCCHC6Q5VYS8 1495 aaKnown RBP41.97■■■■■ 4.31
HNRNPM-208ENST00000597270 BICRAQ9NZM4 1560 aa41.93■■■■■ 4.3
HNRNPM-208ENST00000597270 DCAF1Q9Y4B6 1507 aa41.81■■■■■ 4.28
HNRNPM-208ENST00000597270 SCRIBQ14160 1630 aa41.4■■■■■ 4.22
HNRNPM-208ENST00000597270 SHROOM4Q9ULL8 1493 aa41.37■■■■■ 4.21
HNRNPM-208ENST00000597270 CC2D2AQ9P2K1 1620 aa41■■■■■ 4.15
HNRNPM-208ENST00000597270 CECR2Q9BXF3 1484 aa40.93■■■■■ 4.14
HNRNPM-208ENST00000597270 EIF4G1Q04637 1599 aaKnown RBP40.92■■■■■ 4.14
HNRNPM-208ENST00000597270 NCAPD3P42695 1498 aa39.68■■■■□ 3.94
HNRNPM-208ENST00000597270 ATAD2BQ9ULI0 1458 aa39.56■■■■□ 3.92
HNRNPM-208ENST00000597270 SMARCA4P51532 1647 aa39.47■■■■□ 3.91
HNRNPM-208ENST00000597270 SMARCA2P51531 1590 aa39.42■■■■□ 3.9
HNRNPM-208ENST00000597270 HMGXB3Q12766 1538 aa39.32■■■■□ 3.89
HNRNPM-208ENST00000597270 BAZ1AQ9NRL2 1556 aaPredicted RBP39.31■■■■□ 3.88
HNRNPM-208ENST00000597270 ERCC6Q03468 1493 aa39.25■■■■□ 3.87
HNRNPM-208ENST00000597270 BAZ1BQ9UIG0 1483 aaKnown RBP39.17■■■■□ 3.86
HNRNPM-208ENST00000597270 DNAJC5Q9H3Z4 198 aa39.14■■■■□ 3.86
HNRNPM-208ENST00000597270 CUX2O14529 1486 aa39.11■■■■□ 3.85
HNRNPM-208ENST00000597270 PEG3Q9GZU2 1588 aa39.08■■■■□ 3.85
HNRNPM-208ENST00000597270 MROH2BQ7Z745 1585 aa39.04■■■■□ 3.84
HNRNPM-208ENST00000597270 NESP48681 1621 aa39.03■■■■□ 3.84
HNRNPM-208ENST00000597270 LAMC3Q9Y6N6 1575 aa38.73■■■■□ 3.79
HNRNPM-208ENST00000597270 PDS5BQ9NTI5 1447 aa38.58■■■■□ 3.77
HNRNPM-208ENST00000597270 THOC2Q8NI27 1593 aaKnown RBP38.55■■■■□ 3.76
HNRNPM-208ENST00000597270 WIZO95785 1651 aa38.55■■■■□ 3.76
HNRNPM-208ENST00000597270 CADPSQ9ULU8 1353 aa38.5■■■■□ 3.75
HNRNPM-208ENST00000597270 KIF21AQ7Z4S6 1674 aa38.45■■■■□ 3.75
HNRNPM-208ENST00000597270 RSF1Q96T23 1441 aaPredicted RBP38.28■■■■□ 3.72
HNRNPM-208ENST00000597270 MRC2Q9UBG0 1479 aa38.21■■■■□ 3.71
HNRNPM-208ENST00000597270 CEP164Q9UPV0 1460 aa38.07■■■■□ 3.68
HNRNPM-208ENST00000597270 WDR62O43379 1518 aa38.07■■■■□ 3.68
HNRNPM-208ENST00000597270 TOP2AP11388 1531 aaKnown RBP38.07■■■■□ 3.68
HNRNPM-208ENST00000597270 FANCD2Q9BXW9 1451 aa38.04■■■■□ 3.68
HNRNPM-208ENST00000597270 CFTRP13569 1480 aa38.03■■■■□ 3.68
HNRNPM-208ENST00000597270 URB2Q14146 1524 aaKnown RBP37.71■■■■□ 3.63
HNRNPM-208ENST00000597270 CCDC88BA6NC98 1476 aa37.69■■■■□ 3.62
HNRNPM-208ENST00000597270 PRDM2Q13029 1718 aa37.51■■■■□ 3.6
HNRNPM-208ENST00000597270 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
HNRNPM-208ENST00000597270 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
HNRNPM-208ENST00000597270 IFT140Q96RY7 1462 aa37.31■■■■□ 3.56
HNRNPM-208ENST00000597270 TOPBP1Q92547 1522 aa37.31■■■■□ 3.56
HNRNPM-208ENST00000597270 ZNF608Q9ULD9 1512 aaPredicted RBP37.25■■■■□ 3.55
HNRNPM-208ENST00000597270 ABCC8Q09428 1581 aa37.25■■■■□ 3.55
HNRNPM-208ENST00000597270 DNMBPQ6XZF7 1577 aa37.15■■■■□ 3.54
HNRNPM-208ENST00000597270 EIF4G3O43432 1585 aaKnown RBP36.98■■■■□ 3.51
HNRNPM-208ENST00000597270 AQRO60306 1485 aaKnown RBP eCLIP36.95■■■■□ 3.516e-9■■■■□ 22.8
HNRNPM-208ENST00000597270 POLA1P09884 1462 aaPredicted RBP36.93■■■■□ 3.5
HNRNPM-208ENST00000597270 TARBP1Q13395 1621 aaKnown RBP36.92■■■■□ 3.5
HNRNPM-208ENST00000597270 RAD54L2Q9Y4B4 1467 aa36.82■■■■□ 3.49
HNRNPM-208ENST00000597270 RIMBP3CA6NJZ7 1639 aa36.82■■■■□ 3.49
HNRNPM-208ENST00000597270 RIMBP3BA6NNM3 1639 aa36.82■■■■□ 3.49
HNRNPM-208ENST00000597270 RIMBP3Q9UFD9 1639 aa36.82■■■■□ 3.49
HNRNPM-208ENST00000597270 SOGA1O94964 1423 aa36.82■■■■□ 3.48
HNRNPM-208ENST00000597270 FBLN2P98095 1184 aa36.78■■■■□ 3.48
HNRNPM-208ENST00000597270 TDRD9Q8NDG6 1382 aaKnown RBP36.76■■■■□ 3.47
HNRNPM-208ENST00000597270 ARHGEF11O15085 1522 aa36.74■■■■□ 3.47
HNRNPM-208ENST00000597270 SUPT5HO00267 1087 aaKnown RBP36.73■■■■□ 3.47
HNRNPM-208ENST00000597270 FGD5Q6ZNL6 1462 aa36.71■■■■□ 3.47
HNRNPM-208ENST00000597270 CHD1O14646 1710 aa36.68■■■■□ 3.46
HNRNPM-208ENST00000597270 CUX1P39880 1505 aa36.67■■■■□ 3.46
HNRNPM-208ENST00000597270 CYB5RLQ6IPT4 315 aa36.58■■■■□ 3.45
HNRNPM-208ENST00000597270 WDR97A6NE52 1622 aa36.54■■■■□ 3.44
HNRNPM-208ENST00000597270 SNAPC4Q5SXM2 1469 aa36.54■■■■□ 3.44
HNRNPM-208ENST00000597270 CHMP7Q8WUX9 453 aaPredicted RBP36.5■■■■□ 3.43
HNRNPM-208ENST00000597270 GRIN2BQ13224 1484 aa36.46■■■■□ 3.43
HNRNPM-208ENST00000597270 MAGI1Q96QZ7 1491 aaPredicted RBP36.43■■■■□ 3.42
HNRNPM-208ENST00000597270 ARAP1Q96P48 1450 aa36.38■■■■□ 3.41
HNRNPM-208ENST00000597270 GAPVD1Q14C86 1478 aa36.34■■■■□ 3.41
HNRNPM-208ENST00000597270 SYNJ2O15056 1496 aa36.32■■■■□ 3.41
HNRNPM-208ENST00000597270 SYNJ1O43426 1573 aa36.3■■■■□ 3.4
HNRNPM-208ENST00000597270 CLASP1Q7Z460 1538 aa36.29■■■■□ 3.4
HNRNPM-208ENST00000597270 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
HNRNPM-208ENST00000597270 PBRM1Q86U86 1689 aa36.22■■■■□ 3.39
HNRNPM-208ENST00000597270 WRNQ14191 1432 aaPredicted RBP eCLIP36.2■■■■□ 3.39
HNRNPM-208ENST00000597270 TRHP20396 242 aaPredicted RBP36.19■■■■□ 3.38
HNRNPM-208ENST00000597270 ABCA5Q8WWZ7 1642 aa36.18■■■■□ 3.38
HNRNPM-208ENST00000597270 TOP2BQ02880 1626 aa36.07■■■■□ 3.36
HNRNPM-208ENST00000597270 BIVM-ERCC5R4GMW8 1640 aa36.04■■■■□ 3.36
HNRNPM-208ENST00000597270 GRIN2AQ12879 1464 aa35.98■■■■□ 3.35
HNRNPM-208ENST00000597270 ADAMTS12P58397 1594 aa35.91■■■■□ 3.34
HNRNPM-208ENST00000597270 FHAD1B1AJZ9 1412 aa35.89■■■■□ 3.34
HNRNPM-208ENST00000597270 NUP160Q12769 1436 aa35.85■■■■□ 3.33
HNRNPM-208ENST00000597270 ERICH3Q5RHP9 1530 aa35.83■■■■□ 3.33
HNRNPM-208ENST00000597270 CEP170Q5SW79 1584 aa35.81■■■■□ 3.32
HNRNPM-208ENST00000597270 ERCC6L2Q5T890 1561 aa35.75■■■■□ 3.31
HNRNPM-208ENST00000597270 SHROOM2Q13796 1616 aa35.62■■■■□ 3.29
HNRNPM-208ENST00000597270 JPH4Q96JJ6 628 aa35.58■■■■□ 3.29
HNRNPM-208ENST00000597270 PRG4Q92954 1404 aaPredicted RBP35.56■■■■□ 3.28
HNRNPM-208ENST00000597270 IGF1RP08069 1367 aa35.45■■■■□ 3.27
HNRNPM-208ENST00000597270 KIF27Q86VH2 1401 aa35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms