RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 MAP3K1Q13233 1512 aa23.62■■□□□ 1.37
IRF3-211ENST00000596644 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
IRF3-211ENST00000596644 SUPT6HQ7KZ85 1726 aaKnown RBP23.6■■□□□ 1.37
IRF3-211ENST00000596644 RAPGEF3O95398 923 aa23.6■■□□□ 1.37
IRF3-211ENST00000596644 APLP2Q06481 763 aa23.6■■□□□ 1.37
IRF3-211ENST00000596644 CCNB3Q8WWL7 1395 aa23.59■■□□□ 1.37
IRF3-211ENST00000596644 FRMPD1Q5SYB0 1578 aa23.59■■□□□ 1.37
IRF3-211ENST00000596644 LRRC9Q6ZRR7 1453 aa23.58■■□□□ 1.37
IRF3-211ENST00000596644 RICTORQ6R327 1708 aa23.58■■□□□ 1.37
IRF3-211ENST00000596644 SCAPERQ9BY12 1400 aa23.58■■□□□ 1.36
IRF3-211ENST00000596644 GPATCH8Q9UKJ3 1502 aaKnown RBP23.57■■□□□ 1.36
IRF3-211ENST00000596644 ITSN2Q9NZM3 1697 aa23.55■■□□□ 1.36
IRF3-211ENST00000596644 NCOA2Q15596 1464 aa23.54■■□□□ 1.36
IRF3-211ENST00000596644 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
IRF3-211ENST00000596644 ABCC1P33527 1531 aa23.51■■□□□ 1.35
IRF3-211ENST00000596644 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
IRF3-211ENST00000596644 CFDP1Q9UEE9 299 aaPredicted RBP23.51■■□□□ 1.35
IRF3-211ENST00000596644 ZNF777Q9ULD5 760 aaPredicted RBP23.51■■□□□ 1.35
IRF3-211ENST00000596644 ZMYM4Q5VZL5 1548 aa23.49■■□□□ 1.35
IRF3-211ENST00000596644 SAMD9LQ8IVG5 1584 aa23.48■■□□□ 1.35
IRF3-211ENST00000596644 ZNF518AQ6AHZ1 1483 aa23.47■■□□□ 1.35
IRF3-211ENST00000596644 ARHGEF40Q8TER5 1519 aa23.45■■□□□ 1.34
IRF3-211ENST00000596644 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
IRF3-211ENST00000596644 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
IRF3-211ENST00000596644 ARHGEF12Q9NZN5 1544 aa23.43■■□□□ 1.34
IRF3-211ENST00000596644 PLEKHH2Q8IVE3 1493 aa23.43■■□□□ 1.34
IRF3-211ENST00000596644 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
IRF3-211ENST00000596644 KDM5CP41229 1560 aa23.42■■□□□ 1.34
IRF3-211ENST00000596644 AFAP1Q8N556 730 aa23.41■■□□□ 1.34
IRF3-211ENST00000596644 TRAPPC8Q9Y2L5 1435 aa23.41■■□□□ 1.34
IRF3-211ENST00000596644 MYT1LQ9UL68 1186 aa23.39■■□□□ 1.33
IRF3-211ENST00000596644 KIAA1107Q9UPP5 1409 aa23.39■■□□□ 1.33
IRF3-211ENST00000596644 HECW2Q9P2P5 1572 aa23.39■■□□□ 1.33
IRF3-211ENST00000596644 YEATS2Q9ULM3 1422 aa23.38■■□□□ 1.33
IRF3-211ENST00000596644 HNRNPMP52272 730 aaKnown RBP eCLIP23.37■■□□□ 1.33
IRF3-211ENST00000596644 ZNF644Q9H582 1327 aaPredicted RBP23.36■■□□□ 1.33
IRF3-211ENST00000596644 CAMSAP2Q08AD1 1489 aa23.36■■□□□ 1.33
IRF3-211ENST00000596644 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
IRF3-211ENST00000596644 MLH3Q9UHC1 1453 aa23.33■■□□□ 1.33
IRF3-211ENST00000596644 ARID4BQ4LE39 1312 aaPredicted RBP23.32■■□□□ 1.32
IRF3-211ENST00000596644 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
IRF3-211ENST00000596644 ATP10AO60312 1499 aa23.3■■□□□ 1.32
IRF3-211ENST00000596644 KDM4FA0A1W2PPD8 638 aa23.3■■□□□ 1.32
IRF3-211ENST00000596644 MIA2Q96PC5 1412 aa23.3■■□□□ 1.32
IRF3-211ENST00000596644 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
IRF3-211ENST00000596644 DIP2CQ9Y2E4 1556 aa23.29■■□□□ 1.32
IRF3-211ENST00000596644 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
IRF3-211ENST00000596644 ABCA6Q8N139 1617 aa23.29■■□□□ 1.32
IRF3-211ENST00000596644 MBD5Q9P267 1494 aa23.29■■□□□ 1.32
IRF3-211ENST00000596644 SPAG9O60271 1321 aaKnown RBP23.29■■□□□ 1.32
IRF3-211ENST00000596644 CCDC141Q6ZP82 1450 aa23.26■■□□□ 1.31
IRF3-211ENST00000596644 ATP7AQ04656 1500 aa23.26■■□□□ 1.31
IRF3-211ENST00000596644 INO80Q9ULG1 1556 aaPredicted RBP23.26■■□□□ 1.31
IRF3-211ENST00000596644 SIGLEC1Q9BZZ2 1709 aa23.25■■□□□ 1.31
IRF3-211ENST00000596644 BCORL1Q5H9F3 1711 aa23.24■■□□□ 1.31
IRF3-211ENST00000596644 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
IRF3-211ENST00000596644 PTPN23Q9H3S7 1636 aa23.23■■□□□ 1.31
IRF3-211ENST00000596644 RSPH4AQ5TD94 716 aa23.22■■□□□ 1.31
IRF3-211ENST00000596644 FGD6Q6ZV73 1430 aa23.22■■□□□ 1.31
IRF3-211ENST00000596644 REREQ9P2R6 1566 aa23.21■■□□□ 1.31
IRF3-211ENST00000596644 ADAMTSL3P82987 1691 aa23.19■■□□□ 1.3
IRF3-211ENST00000596644 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
IRF3-211ENST00000596644 RTEL1-TNFRSF6BF6WH68 1400 aa23.16■■□□□ 1.3
IRF3-211ENST00000596644 TSPY4P0CV99 314 aa23.16■■□□□ 1.3
IRF3-211ENST00000596644 TSPY10P0CW01 314 aa23.16■■□□□ 1.3
IRF3-211ENST00000596644 MLECQ14165 292 aa23.16■■□□□ 1.3
IRF3-211ENST00000596644 TCOF1Q13428 1488 aaKnown RBP23.16■■□□□ 1.3
IRF3-211ENST00000596644 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
IRF3-211ENST00000596644 MADDQ8WXG6 1647 aa23.15■■□□□ 1.3
IRF3-211ENST00000596644 AGLP35573 1532 aa23.13■■□□□ 1.29
IRF3-211ENST00000596644 A2MP01023 1474 aa23.12■■□□□ 1.29
IRF3-211ENST00000596644 MAST1Q9Y2H9 1570 aa23.11■■□□□ 1.29
IRF3-211ENST00000596644 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
IRF3-211ENST00000596644 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
IRF3-211ENST00000596644 RIMS1Q86UR5 1692 aaKnown RBP23.1■■□□□ 1.29
IRF3-211ENST00000596644 DNMT1P26358 1616 aaKnown RBP23.1■■□□□ 1.29
IRF3-211ENST00000596644 PLXNC1O60486 1568 aa23.1■■□□□ 1.29
IRF3-211ENST00000596644 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
IRF3-211ENST00000596644 DAPK1P53355 1430 aa23.08■■□□□ 1.28
IRF3-211ENST00000596644 ABCC5O15440 1437 aa23.07■■□□□ 1.28
IRF3-211ENST00000596644 SHANK2Q9UPX8 1470 aa23.06■■□□□ 1.28
IRF3-211ENST00000596644 PTPRMP28827 1452 aa23.05■■□□□ 1.28
IRF3-211ENST00000596644 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
IRF3-211ENST00000596644 ESF1Q9H501 851 aaKnown RBP23■■□□□ 1.27
IRF3-211ENST00000596644 PLPPR3Q6T4P5 718 aa22.97■■□□□ 1.27
IRF3-211ENST00000596644 GGT6Q6P531 493 aa22.96■■□□□ 1.27
IRF3-211ENST00000596644 CHIC2Q9UKJ5 165 aa22.96■■□□□ 1.27
IRF3-211ENST00000596644 KIF3BO15066 747 aa22.95■■□□□ 1.26
IRF3-211ENST00000596644 DUOX2Q9NRD8 1548 aa22.95■■□□□ 1.26
IRF3-211ENST00000596644 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
IRF3-211ENST00000596644 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
IRF3-211ENST00000596644 CNTLNQ9NXG0 1405 aa22.93■■□□□ 1.26
IRF3-211ENST00000596644 RRP7BPQ9NSQ0 103 aa22.93■■□□□ 1.26
IRF3-211ENST00000596644 EIF2AK4Q9P2K8 1649 aaKnown RBP22.93■■□□□ 1.26
IRF3-211ENST00000596644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.91■■□□□ 1.26
IRF3-211ENST00000596644 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
IRF3-211ENST00000596644 CLTCQ00610 1675 aaKnown RBP22.9■■□□□ 1.26
IRF3-211ENST00000596644 ADGRL2O95490 1459 aa22.9■■□□□ 1.26
IRF3-211ENST00000596644 MROH2AA6NES4 1674 aa22.89■■□□□ 1.25
IRF3-211ENST00000596644 NCOA1Q15788 1441 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms