RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 TMEM106CQ9BVX2 250 aa14.27□□□□□ -0.13
FARP1-220ENST00000596613 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
FARP1-220ENST00000596613 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
FARP1-220ENST00000596613 CHMP7Q8WUX9 453 aaPredicted RBP14.26□□□□□ -0.13
FARP1-220ENST00000596613 SCUBE2Q9NQ36 999 aa14.25□□□□□ -0.13
FARP1-220ENST00000596613 CHRM1P11229 460 aaPredicted RBP14.24□□□□□ -0.13
FARP1-220ENST00000596613 EIF4G3O43432 1585 aaKnown RBP14.24□□□□□ -0.13
FARP1-220ENST00000596613 TARBP1Q13395 1621 aaKnown RBP14.23□□□□□ -0.13
FARP1-220ENST00000596613 CHGAP10645 457 aaKnown RBP14.23□□□□□ -0.13
FARP1-220ENST00000596613 CUX1P39880 1505 aa14.23□□□□□ -0.13
FARP1-220ENST00000596613 RIOK3O14730 519 aaKnown RBP14.21□□□□□ -0.13
FARP1-220ENST00000596613 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.13
FARP1-220ENST00000596613 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
FARP1-220ENST00000596613 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
FARP1-220ENST00000596613 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
FARP1-220ENST00000596613 POTEJP0CG39 1038 aa14.2□□□□□ -0.14
FARP1-220ENST00000596613 ZNF467Q7Z7K2 595 aaPredicted RBP14.2□□□□□ -0.14
FARP1-220ENST00000596613 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
FARP1-220ENST00000596613 HS6ST3Q8IZP7 471 aa14.16□□□□□ -0.14
FARP1-220ENST00000596613 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
FARP1-220ENST00000596613 COLQQ9Y215 455 aaPredicted RBP14.16□□□□□ -0.14
FARP1-220ENST00000596613 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
FARP1-220ENST00000596613 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
FARP1-220ENST00000596613 MAGI1Q96QZ7 1491 aaPredicted RBP14.14□□□□□ -0.15
FARP1-220ENST00000596613 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
FARP1-220ENST00000596613 ABCA10Q8WWZ4 1543 aa14.12□□□□□ -0.15
FARP1-220ENST00000596613 PLCG2P16885 1265 aa14.12□□□□□ -0.15
FARP1-220ENST00000596613 HAP1P54257 671 aaPredicted RBP14.12□□□□□ -0.15
FARP1-220ENST00000596613 PAXIP1Q6ZW49 1069 aaPredicted RBP14.12□□□□□ -0.15
FARP1-220ENST00000596613 VGFO15240 615 aaPredicted RBP14.11□□□□□ -0.15
FARP1-220ENST00000596613 TOP2BQ02880 1626 aa14.1□□□□□ -0.15
FARP1-220ENST00000596613 CYB5RLQ6IPT4 315 aa14.09□□□□□ -0.15
FARP1-220ENST00000596613 CHD1O14646 1710 aa14.09□□□□□ -0.15
FARP1-220ENST00000596613 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
FARP1-220ENST00000596613 CFAP44Q96MT7 982 aa14.08□□□□□ -0.16
FARP1-220ENST00000596613 SYNJ1O43426 1573 aa14.06□□□□□ -0.16
FARP1-220ENST00000596613 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
FARP1-220ENST00000596613 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
FARP1-220ENST00000596613 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
FARP1-220ENST00000596613 OCEL1Q9H607 264 aa14.06□□□□□ -0.16
FARP1-220ENST00000596613 STK25O00506 426 aa14.04□□□□□ -0.16
FARP1-220ENST00000596613 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
FARP1-220ENST00000596613 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
FARP1-220ENST00000596613 RIMBP3CA6NJZ7 1639 aa14.03□□□□□ -0.16
FARP1-220ENST00000596613 RIMBP3BA6NNM3 1639 aa14.03□□□□□ -0.16
FARP1-220ENST00000596613 RIMBP3Q9UFD9 1639 aa14.03□□□□□ -0.16
FARP1-220ENST00000596613 PBRM1Q86U86 1689 aa14.02□□□□□ -0.16
FARP1-220ENST00000596613 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.01□□□□□ -0.17
FARP1-220ENST00000596613 PSEN1P49768 467 aa14.01□□□□□ -0.17
FARP1-220ENST00000596613 ZFP91Q96JP5 570 aaPredicted RBP14.01□□□□□ -0.17
FARP1-220ENST00000596613 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
FARP1-220ENST00000596613 MKRN3Q13064 507 aaKnown RBP14□□□□□ -0.17
FARP1-220ENST00000596613 FHAD1B1AJZ9 1412 aa13.99□□□□□ -0.17
FARP1-220ENST00000596613 PDAP1Q13442 181 aaKnown RBP13.99□□□□□ -0.17
FARP1-220ENST00000596613 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
FARP1-220ENST00000596613 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
FARP1-220ENST00000596613 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
FARP1-220ENST00000596613 KIF27Q86VH2 1401 aa13.97□□□□□ -0.17
FARP1-220ENST00000596613 POTEMA6NI47 508 aa13.96□□□□□ -0.17
FARP1-220ENST00000596613 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
FARP1-220ENST00000596613 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
FARP1-220ENST00000596613 POTEGQ6S5H5 508 aa13.93□□□□□ -0.18
FARP1-220ENST00000596613 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
FARP1-220ENST00000596613 FAM163AQ96GL9 167 aaPredicted RBP13.93□□□□□ -0.18
FARP1-220ENST00000596613 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
FARP1-220ENST00000596613 SLAIN1Q8ND83 568 aa13.92□□□□□ -0.18
FARP1-220ENST00000596613 ADAMTS12P58397 1594 aa13.9□□□□□ -0.18
FARP1-220ENST00000596613 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
FARP1-220ENST00000596613 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
FARP1-220ENST00000596613 TSHZ2Q9NRE2 1034 aa13.88□□□□□ -0.19
FARP1-220ENST00000596613 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
FARP1-220ENST00000596613 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
FARP1-220ENST00000596613 GTPBP6O43824 516 aaPredicted RBP13.87□□□□□ -0.19
FARP1-220ENST00000596613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
FARP1-220ENST00000596613 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.87□□□□□ -0.19
FARP1-220ENST00000596613 IGF1RP08069 1367 aa13.86□□□□□ -0.19
FARP1-220ENST00000596613 NUP160Q12769 1436 aa13.86□□□□□ -0.19
FARP1-220ENST00000596613 PDCD7Q8N8D1 485 aaKnown RBP13.85□□□□□ -0.19
FARP1-220ENST00000596613 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.19
FARP1-220ENST00000596613 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
FARP1-220ENST00000596613 CABP2Q9NPB3 220 aa13.82□□□□□ -0.2
FARP1-220ENST00000596613 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
FARP1-220ENST00000596613 LCE2DQ5TA82 110 aaPredicted RBP13.81□□□□□ -0.2
FARP1-220ENST00000596613 CUL7Q14999 1698 aa13.81□□□□□ -0.2
FARP1-220ENST00000596613 FAM9AQ8IZU1 332 aaPredicted RBP13.8□□□□□ -0.2
FARP1-220ENST00000596613 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
FARP1-220ENST00000596613 SNPHO15079 494 aa13.79□□□□□ -0.2
FARP1-220ENST00000596613 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
FARP1-220ENST00000596613 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
FARP1-220ENST00000596613 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
FARP1-220ENST00000596613 KIAA0586Q9BVV6 1533 aa13.76□□□□□ -0.21
FARP1-220ENST00000596613 PLSCR2Q9NRY7 297 aa13.75□□□□□ -0.21
FARP1-220ENST00000596613 CARMIL2Q6F5E8 1435 aa13.73□□□□□ -0.21
FARP1-220ENST00000596613 G3V3G9 751 aa13.73□□□□□ -0.21
FARP1-220ENST00000596613 SHROOM2Q13796 1616 aa13.72□□□□□ -0.21
FARP1-220ENST00000596613 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
FARP1-220ENST00000596613 RAPGEF2Q9Y4G8 1499 aa13.71□□□□□ -0.21
FARP1-220ENST00000596613 ST18O60284 1047 aa13.69□□□□□ -0.22
FARP1-220ENST00000596613 ERCC6L2Q5T890 1561 aa13.68□□□□□ -0.22
FARP1-220ENST00000596613 TMEM121BQ9BXQ6 578 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms