RNA–Protein interactions for RNA: ENST00000596545.5

FARP1-218, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-218ENST00000596545 LRRC9Q6ZRR7 1453 aa20.87■□□□□ 0.93
FARP1-218ENST00000596545 ITSN2Q9NZM3 1697 aa20.86■□□□□ 0.93
FARP1-218ENST00000596545 AKNAQ7Z591 1439 aa20.86■□□□□ 0.93
FARP1-218ENST00000596545 APLP2Q06481 763 aa20.84■□□□□ 0.93
FARP1-218ENST00000596545 RICTORQ6R327 1708 aa20.83■□□□□ 0.92
FARP1-218ENST00000596545 ADGRL1O94910 1474 aa20.82■□□□□ 0.92
FARP1-218ENST00000596545 EFCAB2Q5VUJ9 269 aa20.82■□□□□ 0.92
FARP1-218ENST00000596545 GPATCH8Q9UKJ3 1502 aaKnown RBP20.82■□□□□ 0.92
FARP1-218ENST00000596545 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
FARP1-218ENST00000596545 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
FARP1-218ENST00000596545 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
FARP1-218ENST00000596545 KANK4Q5T7N3 995 aaPredicted RBP20.79■□□□□ 0.92
FARP1-218ENST00000596545 DENND4BO75064 1496 aaPredicted RBP20.79■□□□□ 0.92
FARP1-218ENST00000596545 ABCC1P33527 1531 aa20.77■□□□□ 0.92
FARP1-218ENST00000596545 SAMD9LQ8IVG5 1584 aa20.76■□□□□ 0.91
FARP1-218ENST00000596545 SCAPERQ9BY12 1400 aa20.76■□□□□ 0.91
FARP1-218ENST00000596545 RAPGEF3O95398 923 aa20.75■□□□□ 0.91
FARP1-218ENST00000596545 POGZQ7Z3K3 1410 aa20.74■□□□□ 0.91
FARP1-218ENST00000596545 CFDP1Q9UEE9 299 aaPredicted RBP20.73■□□□□ 0.91
FARP1-218ENST00000596545 ZMYM4Q5VZL5 1548 aa20.72■□□□□ 0.91
FARP1-218ENST00000596545 ZNF777Q9ULD5 760 aaPredicted RBP20.71■□□□□ 0.91
FARP1-218ENST00000596545 SYCP2Q9BX26 1530 aa20.7■□□□□ 0.9
FARP1-218ENST00000596545 ZNF518AQ6AHZ1 1483 aa20.69■□□□□ 0.9
FARP1-218ENST00000596545 PLEKHH2Q8IVE3 1493 aa20.69■□□□□ 0.9
FARP1-218ENST00000596545 ARHGEF12Q9NZN5 1544 aa20.68■□□□□ 0.9
FARP1-218ENST00000596545 ARHGEF40Q8TER5 1519 aa20.68■□□□□ 0.9
FARP1-218ENST00000596545 KDM5CP41229 1560 aa20.68■□□□□ 0.9
FARP1-218ENST00000596545 HECW2Q9P2P5 1572 aa20.65■□□□□ 0.9
FARP1-218ENST00000596545 MYOM3Q5VTT5 1437 aa20.65■□□□□ 0.9
FARP1-218ENST00000596545 ZFYVE16Q7Z3T8 1539 aa20.64■□□□□ 0.9
FARP1-218ENST00000596545 CAMSAP2Q08AD1 1489 aa20.64■□□□□ 0.89
FARP1-218ENST00000596545 TRAPPC8Q9Y2L5 1435 aa20.64■□□□□ 0.89
FARP1-218ENST00000596545 MAGI2Q86UL8 1455 aa20.63■□□□□ 0.89
FARP1-218ENST00000596545 KIAA1107Q9UPP5 1409 aa20.63■□□□□ 0.89
FARP1-218ENST00000596545 ZNF644Q9H582 1327 aaPredicted RBP20.61■□□□□ 0.89
FARP1-218ENST00000596545 AFAP1Q8N556 730 aa20.61■□□□□ 0.89
FARP1-218ENST00000596545 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
FARP1-218ENST00000596545 YEATS2Q9ULM3 1422 aa20.6■□□□□ 0.89
FARP1-218ENST00000596545 HNRNPMP52272 730 aaKnown RBP eCLIP20.59■□□□□ 0.89
FARP1-218ENST00000596545 KIDINS220Q9ULH0 1771 aa20.58■□□□□ 0.89
FARP1-218ENST00000596545 MLH3Q9UHC1 1453 aa20.57■□□□□ 0.88
FARP1-218ENST00000596545 PTPN23Q9H3S7 1636 aa20.57■□□□□ 0.88
FARP1-218ENST00000596545 ABCA6Q8N139 1617 aa20.56■□□□□ 0.88
FARP1-218ENST00000596545 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
FARP1-218ENST00000596545 INO80Q9ULG1 1556 aaPredicted RBP20.56■□□□□ 0.88
FARP1-218ENST00000596545 MYT1LQ9UL68 1186 aa20.56■□□□□ 0.88
FARP1-218ENST00000596545 ARHGEF5Q12774 1597 aa20.55■□□□□ 0.88
FARP1-218ENST00000596545 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
FARP1-218ENST00000596545 FGD6Q6ZV73 1430 aa20.54■□□□□ 0.88
FARP1-218ENST00000596545 CCDC141Q6ZP82 1450 aa20.54■□□□□ 0.88
FARP1-218ENST00000596545 ATP7AQ04656 1500 aa20.53■□□□□ 0.88
FARP1-218ENST00000596545 SIGLEC1Q9BZZ2 1709 aa20.53■□□□□ 0.88
FARP1-218ENST00000596545 SPAG9O60271 1321 aaKnown RBP20.52■□□□□ 0.87
FARP1-218ENST00000596545 ATP10AO60312 1499 aa20.51■□□□□ 0.87
FARP1-218ENST00000596545 PPARGC1BQ86YN6 1023 aaKnown RBP20.51■□□□□ 0.87
FARP1-218ENST00000596545 C9orf84Q5VXU9 1444 aa20.51■□□□□ 0.87
FARP1-218ENST00000596545 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
FARP1-218ENST00000596545 CROCC2H7BZ55 1655 aa20.49■□□□□ 0.87
FARP1-218ENST00000596545 REREQ9P2R6 1566 aa20.49■□□□□ 0.87
FARP1-218ENST00000596545 BCORL1Q5H9F3 1711 aa20.48■□□□□ 0.87
FARP1-218ENST00000596545 ADGBQ8N7X0 1667 aa20.48■□□□□ 0.87
FARP1-218ENST00000596545 RSPH4AQ5TD94 716 aa20.47■□□□□ 0.87
FARP1-218ENST00000596545 ARID4BQ4LE39 1312 aaPredicted RBP20.47■□□□□ 0.87
FARP1-218ENST00000596545 DNMT1P26358 1616 aaKnown RBP20.46■□□□□ 0.87
FARP1-218ENST00000596545 MAST1Q9Y2H9 1570 aa20.45■□□□□ 0.86
FARP1-218ENST00000596545 RTEL1-TNFRSF6BF6WH68 1400 aa20.44■□□□□ 0.86
FARP1-218ENST00000596545 ADAMTSL3P82987 1691 aa20.43■□□□□ 0.86
FARP1-218ENST00000596545 KDM4FA0A1W2PPD8 638 aa20.43■□□□□ 0.86
FARP1-218ENST00000596545 PLXNC1O60486 1568 aa20.41■□□□□ 0.86
FARP1-218ENST00000596545 TSPY4P0CV99 314 aa20.4■□□□□ 0.86
FARP1-218ENST00000596545 TSPY10P0CW01 314 aa20.4■□□□□ 0.86
FARP1-218ENST00000596545 DAPK1P53355 1430 aa20.4■□□□□ 0.86
FARP1-218ENST00000596545 FER1L4A9Z1Z3 1794 aa20.39■□□□□ 0.86
FARP1-218ENST00000596545 MADDQ8WXG6 1647 aa20.39■□□□□ 0.86
FARP1-218ENST00000596545 AGLP35573 1532 aa20.39■□□□□ 0.85
FARP1-218ENST00000596545 A2MP01023 1474 aa20.39■□□□□ 0.85
FARP1-218ENST00000596545 SHANK2Q9UPX8 1470 aa20.39■□□□□ 0.85
FARP1-218ENST00000596545 FAM50AQ14320 339 aaKnown RBP20.39■□□□□ 0.85
FARP1-218ENST00000596545 ABCC5O15440 1437 aa20.38■□□□□ 0.85
FARP1-218ENST00000596545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.37■□□□□ 0.85
FARP1-218ENST00000596545 RIMS1Q86UR5 1692 aaKnown RBP20.36■□□□□ 0.85
FARP1-218ENST00000596545 MLECQ14165 292 aa20.34■□□□□ 0.85
FARP1-218ENST00000596545 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
FARP1-218ENST00000596545 DHX29Q7Z478 1369 aaKnown RBP20.3■□□□□ 0.84
FARP1-218ENST00000596545 DUOX2Q9NRD8 1548 aa20.27■□□□□ 0.84
FARP1-218ENST00000596545 EIF2AK4Q9P2K8 1649 aaKnown RBP20.27■□□□□ 0.84
FARP1-218ENST00000596545 ADGRL2O95490 1459 aa20.26■□□□□ 0.83
FARP1-218ENST00000596545 PTPRMP28827 1452 aa20.26■□□□□ 0.83
FARP1-218ENST00000596545 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
FARP1-218ENST00000596545 CHIC2Q9UKJ5 165 aa20.26■□□□□ 0.83
FARP1-218ENST00000596545 ANKRD30AQ9BXX3 1397 aa20.25■□□□□ 0.83
FARP1-218ENST00000596545 CLTCQ00610 1675 aaKnown RBP20.23■□□□□ 0.83
FARP1-218ENST00000596545 PTPRKQ15262 1439 aa20.23■□□□□ 0.83
FARP1-218ENST00000596545 NCOA1Q15788 1441 aa20.23■□□□□ 0.83
FARP1-218ENST00000596545 RNF17Q9BXT8 1623 aaKnown RBP20.23■□□□□ 0.83
FARP1-218ENST00000596545 RRP7BPQ9NSQ0 103 aa20.22■□□□□ 0.83
FARP1-218ENST00000596545 KIF3BO15066 747 aa20.21■□□□□ 0.83
FARP1-218ENST00000596545 ITGAEP38570 1179 aa20.21■□□□□ 0.83
FARP1-218ENST00000596545 MROH2AA6NES4 1674 aa20.21■□□□□ 0.83
FARP1-218ENST00000596545 ERBINQ96RT1 1412 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms