RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 POGZQ7Z3K3 1410 aa14.46□□□□□ -0.09
FARP1-217ENST00000596467 ZMYM4Q5VZL5 1548 aa14.46□□□□□ -0.1
FARP1-217ENST00000596467 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
FARP1-217ENST00000596467 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
FARP1-217ENST00000596467 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
FARP1-217ENST00000596467 FHOD3Q2V2M9 1422 aa14.44□□□□□ -0.1
FARP1-217ENST00000596467 DENND4BO75064 1496 aaPredicted RBP14.44□□□□□ -0.1
FARP1-217ENST00000596467 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
FARP1-217ENST00000596467 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
FARP1-217ENST00000596467 AKNAQ7Z591 1439 aa14.41□□□□□ -0.1
FARP1-217ENST00000596467 SAMD9Q5K651 1589 aa14.4□□□□□ -0.1
FARP1-217ENST00000596467 MAGI2Q86UL8 1455 aa14.4□□□□□ -0.1
FARP1-217ENST00000596467 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
FARP1-217ENST00000596467 ZFYVE16Q7Z3T8 1539 aa14.4□□□□□ -0.1
FARP1-217ENST00000596467 YEATS2Q9ULM3 1422 aa14.38□□□□□ -0.11
FARP1-217ENST00000596467 ARID3CA6NKF2 412 aa14.37□□□□□ -0.11
FARP1-217ENST00000596467 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
FARP1-217ENST00000596467 HECW1Q76N89 1606 aa14.34□□□□□ -0.11
FARP1-217ENST00000596467 NUP153P49790 1475 aaKnown RBP14.34□□□□□ -0.11
FARP1-217ENST00000596467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.33□□□□□ -0.12
FARP1-217ENST00000596467 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
FARP1-217ENST00000596467 IQSEC2Q5JU85 1478 aa14.32□□□□□ -0.12
FARP1-217ENST00000596467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
FARP1-217ENST00000596467 HNRNPUL2Q1KMD3 747 aaKnown RBP14.3□□□□□ -0.12
FARP1-217ENST00000596467 P3H3Q8IVL6 736 aa14.3□□□□□ -0.12
FARP1-217ENST00000596467 PTPRTO14522 1441 aa14.3□□□□□ -0.12
FARP1-217ENST00000596467 PLEKHD1A6NEE1 506 aa14.28□□□□□ -0.12
FARP1-217ENST00000596467 ATP10AO60312 1499 aa14.28□□□□□ -0.12
FARP1-217ENST00000596467 LTBP4Q8N2S1 1624 aa14.28□□□□□ -0.12
FARP1-217ENST00000596467 C9orf84Q5VXU9 1444 aa14.27□□□□□ -0.12
FARP1-217ENST00000596467 UHRF1BP1Q6BDS2 1440 aa14.27□□□□□ -0.12
FARP1-217ENST00000596467 HOXD11P31277 338 aaPredicted RBP14.27□□□□□ -0.13
FARP1-217ENST00000596467 MLECQ14165 292 aa14.26□□□□□ -0.13
FARP1-217ENST00000596467 C3P01024 1663 aa14.26□□□□□ -0.13
FARP1-217ENST00000596467 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
FARP1-217ENST00000596467 SCAPERQ9BY12 1400 aa14.24□□□□□ -0.13
FARP1-217ENST00000596467 PLCH2O75038 1416 aa14.22□□□□□ -0.13
FARP1-217ENST00000596467 REREQ9P2R6 1566 aa14.22□□□□□ -0.13
FARP1-217ENST00000596467 CEBPAP49715 358 aaPredicted RBP14.21□□□□□ -0.13
FARP1-217ENST00000596467 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
FARP1-217ENST00000596467 KDM5CP41229 1560 aa14.19□□□□□ -0.14
FARP1-217ENST00000596467 ZNF518AQ6AHZ1 1483 aa14.18□□□□□ -0.14
FARP1-217ENST00000596467 ZBTB22O15209 634 aa14.17□□□□□ -0.14
FARP1-217ENST00000596467 DIP2CQ9Y2E4 1556 aa14.16□□□□□ -0.14
FARP1-217ENST00000596467 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
FARP1-217ENST00000596467 AGLP35573 1532 aa14.15□□□□□ -0.14
FARP1-217ENST00000596467 TRAPPC8Q9Y2L5 1435 aa14.14□□□□□ -0.15
FARP1-217ENST00000596467 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
FARP1-217ENST00000596467 EFCAB2Q5VUJ9 269 aa14.13□□□□□ -0.15
FARP1-217ENST00000596467 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
FARP1-217ENST00000596467 ABCA6Q8N139 1617 aa14.12□□□□□ -0.15
FARP1-217ENST00000596467 CDK13Q14004 1512 aaKnown RBP14.12□□□□□ -0.15
FARP1-217ENST00000596467 CDC42BPBQ9Y5S2 1711 aa14.1□□□□□ -0.15
FARP1-217ENST00000596467 CAMSAP1Q5T5Y3 1602 aa14.1□□□□□ -0.15
FARP1-217ENST00000596467 MLH3Q9UHC1 1453 aa14.1□□□□□ -0.15
FARP1-217ENST00000596467 CNTLNQ9NXG0 1405 aa14.09□□□□□ -0.15
FARP1-217ENST00000596467 ZNF142P52746 1687 aaPredicted RBP14.09□□□□□ -0.15
FARP1-217ENST00000596467 KIF14Q15058 1648 aa14.08□□□□□ -0.15
FARP1-217ENST00000596467 NPATQ14207 1427 aa14.07□□□□□ -0.16
FARP1-217ENST00000596467 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
FARP1-217ENST00000596467 ARHGAP5Q13017 1502 aa14.06□□□□□ -0.16
FARP1-217ENST00000596467 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
FARP1-217ENST00000596467 ITSN2Q9NZM3 1697 aa14.05□□□□□ -0.16
FARP1-217ENST00000596467 UBAP1LF5GYI3 381 aa14.05□□□□□ -0.16
FARP1-217ENST00000596467 AFAP1Q8N556 730 aa14.05□□□□□ -0.16
FARP1-217ENST00000596467 ESF1Q9H501 851 aaKnown RBP14.05□□□□□ -0.16
FARP1-217ENST00000596467 PLA2R1Q13018 1463 aa14.05□□□□□ -0.16
FARP1-217ENST00000596467 PREX2Q70Z35 1606 aa14.02□□□□□ -0.16
FARP1-217ENST00000596467 MYO3AQ8NEV4 1616 aa14.02□□□□□ -0.16
FARP1-217ENST00000596467 EEA1Q15075 1411 aa14.02□□□□□ -0.16
FARP1-217ENST00000596467 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.17
FARP1-217ENST00000596467 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.17
FARP1-217ENST00000596467 LRRIQ1Q96JM4 1722 aa14.01□□□□□ -0.17
FARP1-217ENST00000596467 ABCC1P33527 1531 aa14.01□□□□□ -0.17
FARP1-217ENST00000596467 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
FARP1-217ENST00000596467 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
FARP1-217ENST00000596467 RANGAP1P46060 587 aaPredicted RBP14□□□□□ -0.17
FARP1-217ENST00000596467 PKD2Q13563 968 aa14□□□□□ -0.17
FARP1-217ENST00000596467 FMN1Q68DA7 1419 aa13.99□□□□□ -0.17
FARP1-217ENST00000596467 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
FARP1-217ENST00000596467 CEP170BQ9Y4F5 1589 aaPredicted RBP13.99□□□□□ -0.17
FARP1-217ENST00000596467 CLTCQ00610 1675 aaKnown RBP13.98□□□□□ -0.17
FARP1-217ENST00000596467 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
FARP1-217ENST00000596467 CDC42BPAQ5VT25 1732 aa13.98□□□□□ -0.17
FARP1-217ENST00000596467 CLIP1P30622 1438 aa13.98□□□□□ -0.17
FARP1-217ENST00000596467 NCKAP5LQ9HCH0 1330 aa13.97□□□□□ -0.17
FARP1-217ENST00000596467 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
FARP1-217ENST00000596467 ZMYM3Q14202 1370 aa13.96□□□□□ -0.17
FARP1-217ENST00000596467 CPS1P31327 1500 aa13.95□□□□□ -0.18
FARP1-217ENST00000596467 SAMD9LQ8IVG5 1584 aa13.93□□□□□ -0.18
FARP1-217ENST00000596467 HSPA1LP34931 641 aa13.93□□□□□ -0.18
FARP1-217ENST00000596467 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
FARP1-217ENST00000596467 PTPRKQ15262 1439 aa13.91□□□□□ -0.18
FARP1-217ENST00000596467 DNMT1P26358 1616 aaKnown RBP13.91□□□□□ -0.18
FARP1-217ENST00000596467 TOM1O60784 492 aa13.91□□□□□ -0.18
FARP1-217ENST00000596467 ARHGAP35Q9NRY4 1499 aa13.89□□□□□ -0.19
FARP1-217ENST00000596467 ATP1B4Q9UN42 357 aaPredicted RBP13.89□□□□□ -0.19
FARP1-217ENST00000596467 NEURL4Q96JN8 1562 aa13.88□□□□□ -0.19
FARP1-217ENST00000596467 A2ML1A8K2U0 1454 aa13.88□□□□□ -0.19
FARP1-217ENST00000596467 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms