RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
FARP1-217ENST00000596467 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
FARP1-217ENST00000596467 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
FARP1-217ENST00000596467 ABCC9O60706 1549 aa19.98■□□□□ 0.79
FARP1-217ENST00000596467 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
FARP1-217ENST00000596467 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
FARP1-217ENST00000596467 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
FARP1-217ENST00000596467 NACADO15069 1562 aa18.68■□□□□ 0.58
FARP1-217ENST00000596467 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
FARP1-217ENST00000596467 UNC13AQ9UPW8 1703 aa18.6■□□□□ 0.57
FARP1-217ENST00000596467 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
FARP1-217ENST00000596467 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
FARP1-217ENST00000596467 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
FARP1-217ENST00000596467 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
FARP1-217ENST00000596467 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
FARP1-217ENST00000596467 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
FARP1-217ENST00000596467 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
FARP1-217ENST00000596467 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
FARP1-217ENST00000596467 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
FARP1-217ENST00000596467 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.46
FARP1-217ENST00000596467 DCAF1Q9Y4B6 1507 aa17.87■□□□□ 0.45
FARP1-217ENST00000596467 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
FARP1-217ENST00000596467 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
FARP1-217ENST00000596467 CUX2O14529 1486 aa17.53■□□□□ 0.4
FARP1-217ENST00000596467 FOXD1Q16676 465 aa17.39■□□□□ 0.37
FARP1-217ENST00000596467 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
FARP1-217ENST00000596467 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
FARP1-217ENST00000596467 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
FARP1-217ENST00000596467 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
FARP1-217ENST00000596467 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
FARP1-217ENST00000596467 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
FARP1-217ENST00000596467 NESP48681 1621 aa17.03■□□□□ 0.32
FARP1-217ENST00000596467 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
FARP1-217ENST00000596467 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
FARP1-217ENST00000596467 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
FARP1-217ENST00000596467 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
FARP1-217ENST00000596467 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
FARP1-217ENST00000596467 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
FARP1-217ENST00000596467 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
FARP1-217ENST00000596467 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
FARP1-217ENST00000596467 PDS5BQ9NTI5 1447 aa16.8■□□□□ 0.28
FARP1-217ENST00000596467 WDR62O43379 1518 aa16.7■□□□□ 0.26
FARP1-217ENST00000596467 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
FARP1-217ENST00000596467 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
FARP1-217ENST00000596467 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.24
FARP1-217ENST00000596467 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
FARP1-217ENST00000596467 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
FARP1-217ENST00000596467 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
FARP1-217ENST00000596467 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
FARP1-217ENST00000596467 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
FARP1-217ENST00000596467 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
FARP1-217ENST00000596467 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
FARP1-217ENST00000596467 WIZO95785 1651 aa16.4■□□□□ 0.22
FARP1-217ENST00000596467 ADRA2BP18089 450 aa16.39■□□□□ 0.21
FARP1-217ENST00000596467 CFTRP13569 1480 aa16.36■□□□□ 0.21
FARP1-217ENST00000596467 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
FARP1-217ENST00000596467 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
FARP1-217ENST00000596467 PRDM2Q13029 1718 aa16.33■□□□□ 0.21
FARP1-217ENST00000596467 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
FARP1-217ENST00000596467 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
FARP1-217ENST00000596467 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
FARP1-217ENST00000596467 CHD1O14646 1710 aa16.17■□□□□ 0.18
FARP1-217ENST00000596467 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
FARP1-217ENST00000596467 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
FARP1-217ENST00000596467 MSH5O43196 834 aa16.15■□□□□ 0.18
FARP1-217ENST00000596467 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
FARP1-217ENST00000596467 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
FARP1-217ENST00000596467 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
FARP1-217ENST00000596467 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
FARP1-217ENST00000596467 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
FARP1-217ENST00000596467 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
FARP1-217ENST00000596467 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
FARP1-217ENST00000596467 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.16
FARP1-217ENST00000596467 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.151e-8■■□□□ 13
FARP1-217ENST00000596467 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
FARP1-217ENST00000596467 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
FARP1-217ENST00000596467 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
FARP1-217ENST00000596467 FBLN2P98095 1184 aa15.89■□□□□ 0.13
FARP1-217ENST00000596467 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
FARP1-217ENST00000596467 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
FARP1-217ENST00000596467 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
FARP1-217ENST00000596467 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
FARP1-217ENST00000596467 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
FARP1-217ENST00000596467 SOGA1O94964 1423 aa15.77■□□□□ 0.12
FARP1-217ENST00000596467 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.12
FARP1-217ENST00000596467 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
FARP1-217ENST00000596467 SYNJ2O15056 1496 aa15.75■□□□□ 0.11
FARP1-217ENST00000596467 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
FARP1-217ENST00000596467 GRIN2BQ13224 1484 aa15.72■□□□□ 0.11
FARP1-217ENST00000596467 PBRM1Q86U86 1689 aa15.72■□□□□ 0.11
FARP1-217ENST00000596467 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
FARP1-217ENST00000596467 KIF13AQ9H1H9 1805 aa15.68■□□□□ 0.1
FARP1-217ENST00000596467 CUX1P39880 1505 aa15.62■□□□□ 0.09
FARP1-217ENST00000596467 ABCA5Q8WWZ7 1642 aa15.59■□□□□ 0.09
FARP1-217ENST00000596467 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
FARP1-217ENST00000596467 ERCC6L2Q5T890 1561 aa15.58■□□□□ 0.09
FARP1-217ENST00000596467 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
FARP1-217ENST00000596467 CEP170Q5SW79 1584 aa15.55■□□□□ 0.08
FARP1-217ENST00000596467 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
FARP1-217ENST00000596467 GRIN2AQ12879 1464 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms