RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 RIMS1Q86UR5 1692 aaKnown RBP26.46■■□□□ 1.83
LIM2-202ENST00000596399 POGZQ7Z3K3 1410 aa26.46■■□□□ 1.83
LIM2-202ENST00000596399 PLPPR3Q6T4P5 718 aa26.45■■□□□ 1.82
LIM2-202ENST00000596399 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.82
LIM2-202ENST00000596399 MYO5CQ9NQX4 1742 aa26.43■■□□□ 1.82
LIM2-202ENST00000596399 TROQ12816 1431 aaPredicted RBP26.42■■□□□ 1.82
LIM2-202ENST00000596399 MLECQ14165 292 aa26.42■■□□□ 1.82
LIM2-202ENST00000596399 EFCAB2Q5VUJ9 269 aa26.42■■□□□ 1.82
LIM2-202ENST00000596399 MAGI2Q86UL8 1455 aa26.41■■□□□ 1.82
LIM2-202ENST00000596399 LMTK3Q96Q04 1460 aa26.37■■□□□ 1.81
LIM2-202ENST00000596399 PCF11O94913 1555 aaKnown RBP26.37■■□□□ 1.81
LIM2-202ENST00000596399 ARHGAP5Q13017 1502 aa26.35■■□□□ 1.81
LIM2-202ENST00000596399 CLIP1P30622 1438 aa26.34■■□□□ 1.81
LIM2-202ENST00000596399 AFAP1Q8N556 730 aa26.34■■□□□ 1.81
LIM2-202ENST00000596399 CASKIN1Q8WXD9 1431 aa26.32■■□□□ 1.8
LIM2-202ENST00000596399 ATP10AO60312 1499 aa26.32■■□□□ 1.8
LIM2-202ENST00000596399 HSPA2P54652 639 aa26.3■■□□□ 1.8
LIM2-202ENST00000596399 CDC42BPBQ9Y5S2 1711 aa26.29■■□□□ 1.8
LIM2-202ENST00000596399 C9orf84Q5VXU9 1444 aa26.28■■□□□ 1.8
LIM2-202ENST00000596399 FER1L4A9Z1Z3 1794 aa26.28■■□□□ 1.8
LIM2-202ENST00000596399 ZNF518AQ6AHZ1 1483 aa26.27■■□□□ 1.8
LIM2-202ENST00000596399 CCDC18Q5T9S5 1454 aa26.25■■□□□ 1.79
LIM2-202ENST00000596399 MYT1LQ9UL68 1186 aa26.25■■□□□ 1.79
LIM2-202ENST00000596399 KDM5CP41229 1560 aa26.24■■□□□ 1.79
LIM2-202ENST00000596399 ARHGEF12Q9NZN5 1544 aa26.24■■□□□ 1.79
LIM2-202ENST00000596399 CEBPAP49715 358 aaPredicted RBP26.22■■□□□ 1.79
LIM2-202ENST00000596399 TRAPPC8Q9Y2L5 1435 aa26.22■■□□□ 1.79
LIM2-202ENST00000596399 PREX2Q70Z35 1606 aa26.21■■□□□ 1.79
LIM2-202ENST00000596399 DIP2CQ9Y2E4 1556 aa26.2■■□□□ 1.78
LIM2-202ENST00000596399 FYCO1Q9BQS8 1478 aa26.19■■□□□ 1.78
LIM2-202ENST00000596399 ABCC1P33527 1531 aa26.18■■□□□ 1.78
LIM2-202ENST00000596399 ABCA6Q8N139 1617 aa26.17■■□□□ 1.78
LIM2-202ENST00000596399 CDC42BPAQ5VT25 1732 aa26.17■■□□□ 1.78
LIM2-202ENST00000596399 FBXO41Q8TF61 875 aa26.14■■□□□ 1.78
LIM2-202ENST00000596399 MLH3Q9UHC1 1453 aa26.14■■□□□ 1.78
LIM2-202ENST00000596399 ITSN2Q9NZM3 1697 aa26.14■■□□□ 1.78
LIM2-202ENST00000596399 ZNF777Q9ULD5 760 aaPredicted RBP26.13■■□□□ 1.77
LIM2-202ENST00000596399 REREQ9P2R6 1566 aa26.08■■□□□ 1.77
LIM2-202ENST00000596399 GPATCH8Q9UKJ3 1502 aaKnown RBP26.08■■□□□ 1.77
LIM2-202ENST00000596399 KIDINS220Q9ULH0 1771 aa26.07■■□□□ 1.76
LIM2-202ENST00000596399 SAMD9LQ8IVG5 1584 aa26.07■■□□□ 1.76
LIM2-202ENST00000596399 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.76
LIM2-202ENST00000596399 PREX1Q8TCU6 1659 aa26.05■■□□□ 1.76
LIM2-202ENST00000596399 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
LIM2-202ENST00000596399 AGLP35573 1532 aa26.01■■□□□ 1.75
LIM2-202ENST00000596399 C3P01024 1663 aa25.99■■□□□ 1.75
LIM2-202ENST00000596399 CFDP1Q9UEE9 299 aaPredicted RBP25.98■■□□□ 1.75
LIM2-202ENST00000596399 CCNB3Q8WWL7 1395 aa25.97■■□□□ 1.75
LIM2-202ENST00000596399 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
LIM2-202ENST00000596399 SPAG9O60271 1321 aaKnown RBP25.96■■□□□ 1.75
LIM2-202ENST00000596399 ESF1Q9H501 851 aaKnown RBP25.96■■□□□ 1.75
LIM2-202ENST00000596399 UHRF1BP1Q6BDS2 1440 aa25.95■■□□□ 1.74
LIM2-202ENST00000596399 ZNF644Q9H582 1327 aaPredicted RBP25.93■■□□□ 1.74
LIM2-202ENST00000596399 STRCQ7RTU9 1775 aa25.93■■□□□ 1.74
LIM2-202ENST00000596399 CEP162Q5TB80 1403 aa25.91■■□□□ 1.74
LIM2-202ENST00000596399 CERKQ8TCT0 537 aa25.91■■□□□ 1.74
LIM2-202ENST00000596399 SUPT6HQ7KZ85 1726 aaKnown RBP25.91■■□□□ 1.74
LIM2-202ENST00000596399 KIAA1107Q9UPP5 1409 aa25.9■■□□□ 1.74
LIM2-202ENST00000596399 ATP7AQ04656 1500 aa25.9■■□□□ 1.74
LIM2-202ENST00000596399 SETD1BQ9UPS6 1966 aaKnown RBP25.88■■□□□ 1.73
LIM2-202ENST00000596399 TIAM1Q13009 1591 aa25.88■■□□□ 1.73
LIM2-202ENST00000596399 INO80Q9ULG1 1556 aaPredicted RBP25.88■■□□□ 1.73
LIM2-202ENST00000596399 PLEKHH2Q8IVE3 1493 aa25.87■■□□□ 1.73
LIM2-202ENST00000596399 EHBP1L1Q8N3D4 1523 aa25.84■■□□□ 1.73
LIM2-202ENST00000596399 CNTLNQ9NXG0 1405 aa25.84■■□□□ 1.73
LIM2-202ENST00000596399 A2MP01023 1474 aa25.83■■□□□ 1.73
LIM2-202ENST00000596399 ZMYM3Q14202 1370 aa25.82■■□□□ 1.72
LIM2-202ENST00000596399 PLXNC1O60486 1568 aa25.82■■□□□ 1.72
LIM2-202ENST00000596399 MBD5Q9P267 1494 aa25.81■■□□□ 1.72
LIM2-202ENST00000596399 GGT6Q6P531 493 aa25.8■■□□□ 1.72
LIM2-202ENST00000596399 DMRT2Q9Y5R5 561 aa25.8■■□□□ 1.72
LIM2-202ENST00000596399 CLTCQ00610 1675 aaKnown RBP25.79■■□□□ 1.72
LIM2-202ENST00000596399 LOC105371045A0A1W2PR82 267 aa25.78■■□□□ 1.72
LIM2-202ENST00000596399 MROH2AA6NES4 1674 aa25.77■■□□□ 1.72
LIM2-202ENST00000596399 NCOA2Q15596 1464 aa25.74■■□□□ 1.71
LIM2-202ENST00000596399 NPATQ14207 1427 aa25.74■■□□□ 1.71
LIM2-202ENST00000596399 ADGBQ8N7X0 1667 aa25.73■■□□□ 1.71
LIM2-202ENST00000596399 PTPRTO14522 1441 aa25.72■■□□□ 1.71
LIM2-202ENST00000596399 NCOA1Q15788 1441 aa25.71■■□□□ 1.71
LIM2-202ENST00000596399 CAMSAP1Q5T5Y3 1602 aa25.7■■□□□ 1.71
LIM2-202ENST00000596399 PTPRKQ15262 1439 aa25.7■■□□□ 1.7
LIM2-202ENST00000596399 CAMSAP2Q08AD1 1489 aa25.68■■□□□ 1.7
LIM2-202ENST00000596399 RTEL1-TNFRSF6BF6WH68 1400 aa25.68■■□□□ 1.7
LIM2-202ENST00000596399 NCKAP5LQ9HCH0 1330 aa25.67■■□□□ 1.7
LIM2-202ENST00000596399 DHX29Q7Z478 1369 aaKnown RBP25.66■■□□□ 1.7
LIM2-202ENST00000596399 MYO3AQ8NEV4 1616 aa25.65■■□□□ 1.7
LIM2-202ENST00000596399 CCDC141Q6ZP82 1450 aa25.65■■□□□ 1.7
LIM2-202ENST00000596399 LTBP4Q8N2S1 1624 aa25.63■■□□□ 1.69
LIM2-202ENST00000596399 KIF3BO15066 747 aa25.62■■□□□ 1.69
LIM2-202ENST00000596399 VPS8Q8N3P4 1428 aa25.62■■□□□ 1.69
LIM2-202ENST00000596399 KANK4Q5T7N3 995 aaPredicted RBP25.6■■□□□ 1.69
LIM2-202ENST00000596399 PPP6R1Q9UPN7 881 aa25.6■■□□□ 1.69
LIM2-202ENST00000596399 CEP170BQ9Y4F5 1589 aaPredicted RBP25.6■■□□□ 1.69
LIM2-202ENST00000596399 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
LIM2-202ENST00000596399 ZNF142P52746 1687 aaPredicted RBP25.59■■□□□ 1.69
LIM2-202ENST00000596399 FBXO31Q5XUX0 539 aaPredicted RBP25.58■■□□□ 1.69
LIM2-202ENST00000596399 RSPH4AQ5TD94 716 aa25.55■■□□□ 1.68
LIM2-202ENST00000596399 ZNF335Q9H4Z2 1342 aaPredicted RBP25.54■■□□□ 1.68
LIM2-202ENST00000596399 ARHGEF5Q12774 1597 aa25.53■■□□□ 1.68
LIM2-202ENST00000596399 PLA2R1Q13018 1463 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms