RNA–Protein interactions for RNA: ENST00000596118.1

ECH1-206, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 3

Gene ECH1, Length 356 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-206ENST00000596118 HECW1Q76N89 1606 aa12.26□□□□□ -0.45
ECH1-206ENST00000596118 SETD1BQ9UPS6 1966 aaKnown RBP12.25□□□□□ -0.45
ECH1-206ENST00000596118 MAGI2Q86UL8 1455 aa12.25□□□□□ -0.45
ECH1-206ENST00000596118 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
ECH1-206ENST00000596118 MLECQ14165 292 aa12.24□□□□□ -0.45
ECH1-206ENST00000596118 C3P01024 1663 aa12.22□□□□□ -0.45
ECH1-206ENST00000596118 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
ECH1-206ENST00000596118 CEBPAP49715 358 aaPredicted RBP12.2□□□□□ -0.46
ECH1-206ENST00000596118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.19□□□□□ -0.46
ECH1-206ENST00000596118 NCOA1Q15788 1441 aa12.19□□□□□ -0.46
ECH1-206ENST00000596118 SAMD9Q5K651 1589 aa12.18□□□□□ -0.46
ECH1-206ENST00000596118 NUP153P49790 1475 aaKnown RBP12.17□□□□□ -0.46
ECH1-206ENST00000596118 ATP10AO60312 1499 aa12.16□□□□□ -0.46
ECH1-206ENST00000596118 UBAP1LF5GYI3 381 aa12.14□□□□□ -0.47
ECH1-206ENST00000596118 CAMSAP1Q5T5Y3 1602 aa12.13□□□□□ -0.47
ECH1-206ENST00000596118 ZEB1P37275 1124 aaPredicted RBP12.13□□□□□ -0.47
ECH1-206ENST00000596118 REREQ9P2R6 1566 aa12.11□□□□□ -0.47
ECH1-206ENST00000596118 DIP2CQ9Y2E4 1556 aa12.11□□□□□ -0.47
ECH1-206ENST00000596118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
ECH1-206ENST00000596118 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
ECH1-206ENST00000596118 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
ECH1-206ENST00000596118 ZNF335Q9H4Z2 1342 aaPredicted RBP12.1□□□□□ -0.47
ECH1-206ENST00000596118 KDM5CP41229 1560 aa12.09□□□□□ -0.47
ECH1-206ENST00000596118 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
ECH1-206ENST00000596118 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
ECH1-206ENST00000596118 FAM9AQ8IZU1 332 aaPredicted RBP12.09□□□□□ -0.47
ECH1-206ENST00000596118 ZNF142P52746 1687 aaPredicted RBP12.09□□□□□ -0.47
ECH1-206ENST00000596118 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.47
ECH1-206ENST00000596118 MYO5CQ9NQX4 1742 aa12.08□□□□□ -0.47
ECH1-206ENST00000596118 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
ECH1-206ENST00000596118 HSPA1LP34931 641 aa12.07□□□□□ -0.48
ECH1-206ENST00000596118 TRAPPC8Q9Y2L5 1435 aa12.07□□□□□ -0.48
ECH1-206ENST00000596118 ZNF518AQ6AHZ1 1483 aa12.06□□□□□ -0.48
ECH1-206ENST00000596118 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
ECH1-206ENST00000596118 AGLP35573 1532 aa12.06□□□□□ -0.48
ECH1-206ENST00000596118 MYO3AQ8NEV4 1616 aa12.05□□□□□ -0.48
ECH1-206ENST00000596118 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
ECH1-206ENST00000596118 PLCH2O75038 1416 aa12.03□□□□□ -0.48
ECH1-206ENST00000596118 PLA2R1Q13018 1463 aa12.03□□□□□ -0.48
ECH1-206ENST00000596118 PLEKHD1A6NEE1 506 aa12.03□□□□□ -0.48
ECH1-206ENST00000596118 TCOF1Q13428 1488 aaKnown RBP12.02□□□□□ -0.48
ECH1-206ENST00000596118 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.49
ECH1-206ENST00000596118 NPATQ14207 1427 aa12.02□□□□□ -0.49
ECH1-206ENST00000596118 CEP170BQ9Y4F5 1589 aaPredicted RBP12.01□□□□□ -0.49
ECH1-206ENST00000596118 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
ECH1-206ENST00000596118 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
ECH1-206ENST00000596118 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
ECH1-206ENST00000596118 ALKQ9UM73 1620 aa12□□□□□ -0.49
ECH1-206ENST00000596118 PCGF6Q9BYE7 350 aa11.99□□□□□ -0.49
ECH1-206ENST00000596118 CPS1P31327 1500 aa11.99□□□□□ -0.49
ECH1-206ENST00000596118 POLR1AO95602 1720 aaPredicted RBP11.99□□□□□ -0.49
ECH1-206ENST00000596118 PIP4K2BP78356 416 aa11.98□□□□□ -0.49
ECH1-206ENST00000596118 KIF14Q15058 1648 aa11.97□□□□□ -0.49
ECH1-206ENST00000596118 MLH3Q9UHC1 1453 aa11.96□□□□□ -0.49
ECH1-206ENST00000596118 ARHGAP5Q13017 1502 aa11.96□□□□□ -0.5
ECH1-206ENST00000596118 KIDINS220Q9ULH0 1771 aa11.95□□□□□ -0.5
ECH1-206ENST00000596118 ITSN2Q9NZM3 1697 aa11.95□□□□□ -0.5
ECH1-206ENST00000596118 ESF1Q9H501 851 aaKnown RBP11.95□□□□□ -0.5
ECH1-206ENST00000596118 CLTCQ00610 1675 aaKnown RBP11.94□□□□□ -0.5
ECH1-206ENST00000596118 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
ECH1-206ENST00000596118 PKD2Q13563 968 aa11.94□□□□□ -0.5
ECH1-206ENST00000596118 SETD1AO15047 1707 aaKnown RBP11.94□□□□□ -0.5
ECH1-206ENST00000596118 TOM1O60784 492 aa11.93□□□□□ -0.5
ECH1-206ENST00000596118 EFCAB2Q5VUJ9 269 aa11.93□□□□□ -0.5
ECH1-206ENST00000596118 PPP6R1Q9UPN7 881 aa11.93□□□□□ -0.5
ECH1-206ENST00000596118 ABCC1P33527 1531 aa11.92□□□□□ -0.5
ECH1-206ENST00000596118 CDC42BPBQ9Y5S2 1711 aa11.92□□□□□ -0.5
ECH1-206ENST00000596118 AFAP1Q8N556 730 aa11.92□□□□□ -0.5
ECH1-206ENST00000596118 PTPRKQ15262 1439 aa11.91□□□□□ -0.5
ECH1-206ENST00000596118 SHANK2Q9UPX8 1470 aa11.9□□□□□ -0.5
ECH1-206ENST00000596118 RNF17Q9BXT8 1623 aaKnown RBP11.9□□□□□ -0.5
ECH1-206ENST00000596118 VWDEQ8N2E2 1590 aa11.9□□□□□ -0.5
ECH1-206ENST00000596118 MYT1LQ9UL68 1186 aa11.9□□□□□ -0.5
ECH1-206ENST00000596118 DNMT1P26358 1616 aaKnown RBP11.89□□□□□ -0.51
ECH1-206ENST00000596118 PREX2Q70Z35 1606 aa11.89□□□□□ -0.51
ECH1-206ENST00000596118 TRIM26Q12899 539 aaPredicted RBP11.89□□□□□ -0.51
ECH1-206ENST00000596118 CHIC1Q5VXU3 224 aa11.89□□□□□ -0.51
ECH1-206ENST00000596118 RGS17Q9UGC6 210 aaPredicted RBP11.89□□□□□ -0.51
ECH1-206ENST00000596118 ZMYM3Q14202 1370 aa11.88□□□□□ -0.51
ECH1-206ENST00000596118 PPARGC1BQ86YN6 1023 aaKnown RBP11.87□□□□□ -0.51
ECH1-206ENST00000596118 A2ML1A8K2U0 1454 aa11.87□□□□□ -0.51
ECH1-206ENST00000596118 SYNMO15061 1565 aa11.87□□□□□ -0.51
ECH1-206ENST00000596118 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
ECH1-206ENST00000596118 STRCP1A6NGW2 1772 aa11.84□□□□□ -0.51
ECH1-206ENST00000596118 SAMD9LQ8IVG5 1584 aa11.84□□□□□ -0.51
ECH1-206ENST00000596118 RANGAP1P46060 587 aaPredicted RBP11.83□□□□□ -0.52
ECH1-206ENST00000596118 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
ECH1-206ENST00000596118 TROQ12816 1431 aaPredicted RBP11.83□□□□□ -0.52
ECH1-206ENST00000596118 LRRIQ1Q96JM4 1722 aa11.83□□□□□ -0.52
ECH1-206ENST00000596118 IQGAP1P46940 1657 aa11.81□□□□□ -0.52
ECH1-206ENST00000596118 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
ECH1-206ENST00000596118 INO80Q9ULG1 1556 aaPredicted RBP11.8□□□□□ -0.52
ECH1-206ENST00000596118 CLIP1P30622 1438 aa11.8□□□□□ -0.52
ECH1-206ENST00000596118 DEPDC5O75140 1603 aa11.8□□□□□ -0.52
ECH1-206ENST00000596118 LRRC7Q96NW7 1537 aa11.8□□□□□ -0.52
ECH1-206ENST00000596118 POTEAQ6S8J7 498 aa11.79□□□□□ -0.52
ECH1-206ENST00000596118 ATP7AQ04656 1500 aa11.79□□□□□ -0.52
ECH1-206ENST00000596118 SYCP2Q9BX26 1530 aa11.77□□□□□ -0.52
ECH1-206ENST00000596118 MED14O60244 1454 aa11.76□□□□□ -0.53
ECH1-206ENST00000596118 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 301.2 ms