RNA–Protein interactions for RNA: ENST00000596118.1

ECH1-206, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 3

Gene ECH1, Length 356 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-206ENST00000596118 NISCHQ9Y2I1 1504 aa18.28■□□□□ 0.52
ECH1-206ENST00000596118 ABCC9O60706 1549 aa17.28■□□□□ 0.36
ECH1-206ENST00000596118 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
ECH1-206ENST00000596118 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
ECH1-206ENST00000596118 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
ECH1-206ENST00000596118 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
ECH1-206ENST00000596118 NACADO15069 1562 aa15.93■□□□□ 0.14
ECH1-206ENST00000596118 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
ECH1-206ENST00000596118 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
ECH1-206ENST00000596118 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
ECH1-206ENST00000596118 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
ECH1-206ENST00000596118 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
ECH1-206ENST00000596118 DCAF8L2P0C7V8 631 aa15.51■□□□□ 0.07
ECH1-206ENST00000596118 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
ECH1-206ENST00000596118 SHROOM4Q9ULL8 1493 aa15.51■□□□□ 0.07
ECH1-206ENST00000596118 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
ECH1-206ENST00000596118 SCRIBQ14160 1630 aa15.21■□□□□ 0.02
ECH1-206ENST00000596118 CUX2O14529 1486 aa15.18■□□□□ 0.02
ECH1-206ENST00000596118 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0.01
ECH1-206ENST00000596118 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
ECH1-206ENST00000596118 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
ECH1-206ENST00000596118 TRIM41Q8WV44 630 aa14.81□□□□□ -0.04
ECH1-206ENST00000596118 THOC2Q8NI27 1593 aaKnown RBP14.75□□□□□ -0.05
ECH1-206ENST00000596118 NESP48681 1621 aa14.67□□□□□ -0.06
ECH1-206ENST00000596118 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
ECH1-206ENST00000596118 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
ECH1-206ENST00000596118 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
ECH1-206ENST00000596118 ATAD2BQ9ULI0 1458 aa14.56□□□□□ -0.08
ECH1-206ENST00000596118 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
ECH1-206ENST00000596118 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
ECH1-206ENST00000596118 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
ECH1-206ENST00000596118 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
ECH1-206ENST00000596118 BAZ1BQ9UIG0 1483 aaKnown RBP14.39□□□□□ -0.11
ECH1-206ENST00000596118 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
ECH1-206ENST00000596118 WDR62O43379 1518 aa14.36□□□□□ -0.11
ECH1-206ENST00000596118 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.12
ECH1-206ENST00000596118 PEG3Q9GZU2 1588 aa14.31□□□□□ -0.12
ECH1-206ENST00000596118 RIMBP3CA6NJZ7 1639 aa14.3□□□□□ -0.12
ECH1-206ENST00000596118 RIMBP3BA6NNM3 1639 aa14.3□□□□□ -0.12
ECH1-206ENST00000596118 RIMBP3Q9UFD9 1639 aa14.3□□□□□ -0.12
ECH1-206ENST00000596118 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
ECH1-206ENST00000596118 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
ECH1-206ENST00000596118 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
ECH1-206ENST00000596118 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
ECH1-206ENST00000596118 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.16
ECH1-206ENST00000596118 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
ECH1-206ENST00000596118 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
ECH1-206ENST00000596118 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
ECH1-206ENST00000596118 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
ECH1-206ENST00000596118 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
ECH1-206ENST00000596118 CYB5RLQ6IPT4 315 aa13.95□□□□□ -0.18
ECH1-206ENST00000596118 CHD1O14646 1710 aa13.93□□□□□ -0.18
ECH1-206ENST00000596118 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
ECH1-206ENST00000596118 CFTRP13569 1480 aa13.92□□□□□ -0.18
ECH1-206ENST00000596118 WIZO95785 1651 aa13.91□□□□□ -0.18
ECH1-206ENST00000596118 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
ECH1-206ENST00000596118 PRDM2Q13029 1718 aa13.88□□□□□ -0.19
ECH1-206ENST00000596118 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
ECH1-206ENST00000596118 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
ECH1-206ENST00000596118 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
ECH1-206ENST00000596118 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
ECH1-206ENST00000596118 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
ECH1-206ENST00000596118 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
ECH1-206ENST00000596118 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.223e-9■■■■■ 40.3
ECH1-206ENST00000596118 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
ECH1-206ENST00000596118 FBLN2P98095 1184 aa13.62□□□□□ -0.23
ECH1-206ENST00000596118 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
ECH1-206ENST00000596118 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
ECH1-206ENST00000596118 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
ECH1-206ENST00000596118 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
ECH1-206ENST00000596118 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
ECH1-206ENST00000596118 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
ECH1-206ENST00000596118 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
ECH1-206ENST00000596118 KIF13AQ9H1H9 1805 aa13.53□□□□□ -0.24
ECH1-206ENST00000596118 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
ECH1-206ENST00000596118 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
ECH1-206ENST00000596118 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
ECH1-206ENST00000596118 TDRD9Q8NDG6 1382 aaKnown RBP13.46□□□□□ -0.25
ECH1-206ENST00000596118 SYNJ2O15056 1496 aa13.46□□□□□ -0.25
ECH1-206ENST00000596118 ERCC6L2Q5T890 1561 aa13.44□□□□□ -0.26
ECH1-206ENST00000596118 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
ECH1-206ENST00000596118 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
ECH1-206ENST00000596118 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
ECH1-206ENST00000596118 SOGA1O94964 1423 aa13.4□□□□□ -0.26
ECH1-206ENST00000596118 FGD5Q6ZNL6 1462 aa13.38□□□□□ -0.27
ECH1-206ENST00000596118 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
ECH1-206ENST00000596118 CEP170Q5SW79 1584 aa13.34□□□□□ -0.27
ECH1-206ENST00000596118 KDM6BO15054 1643 aa13.32□□□□□ -0.28
ECH1-206ENST00000596118 SHROOM2Q13796 1616 aa13.31□□□□□ -0.28
ECH1-206ENST00000596118 ABCA5Q8WWZ7 1642 aa13.3□□□□□ -0.28
ECH1-206ENST00000596118 DIP2BQ9P265 1576 aa13.29□□□□□ -0.28
ECH1-206ENST00000596118 CUX1P39880 1505 aa13.28□□□□□ -0.28
ECH1-206ENST00000596118 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
ECH1-206ENST00000596118 ABCC10Q5T3U5 1492 aa13.26□□□□□ -0.29
ECH1-206ENST00000596118 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
ECH1-206ENST00000596118 HECW2Q9P2P5 1572 aa13.24□□□□□ -0.29
ECH1-206ENST00000596118 NUP160Q12769 1436 aa13.24□□□□□ -0.29
ECH1-206ENST00000596118 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
ECH1-206ENST00000596118 TSPOAP1O95153 1857 aa13.21□□□□□ -0.29
ECH1-206ENST00000596118 ABCA10Q8WWZ4 1543 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms