RNA–Protein interactions for RNA: ENST00000594794.5

HOMER3-207, Transcript of homer scaffold protein 3, humanhuman

TSL 5 BASIC

Gene HOMER3, Length 903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-207ENST00000594794 POGZQ7Z3K3 1410 aa39.4■■■■□ 3.9
HOMER3-207ENST00000594794 SCAPERQ9BY12 1400 aa39.4■■■■□ 3.9
HOMER3-207ENST00000594794 ZFYVE16Q7Z3T8 1539 aa39.38■■■■□ 3.89
HOMER3-207ENST00000594794 CASKIN1Q8WXD9 1431 aa39.36■■■■□ 3.89
HOMER3-207ENST00000594794 CCDC18Q5T9S5 1454 aa39.33■■■■□ 3.89
HOMER3-207ENST00000594794 LRRIQ1Q96JM4 1722 aa39.33■■■■□ 3.89
HOMER3-207ENST00000594794 MADDQ8WXG6 1647 aa39.32■■■■□ 3.88
HOMER3-207ENST00000594794 YEATS2Q9ULM3 1422 aa39.31■■■■□ 3.88
HOMER3-207ENST00000594794 PCF11O94913 1555 aaKnown RBP39.28■■■■□ 3.88
HOMER3-207ENST00000594794 ZNF518AQ6AHZ1 1483 aa39.23■■■■□ 3.87
HOMER3-207ENST00000594794 ARHGAP5Q13017 1502 aa39.21■■■■□ 3.87
HOMER3-207ENST00000594794 FYCO1Q9BQS8 1478 aa39.21■■■■□ 3.87
HOMER3-207ENST00000594794 ATP10AO60312 1499 aa39.19■■■■□ 3.86
HOMER3-207ENST00000594794 SIGLEC1Q9BZZ2 1709 aa39.17■■■■□ 3.86
HOMER3-207ENST00000594794 KDM5CP41229 1560 aa39.16■■■■□ 3.86
HOMER3-207ENST00000594794 RIMS1Q86UR5 1692 aaKnown RBP39.16■■■■□ 3.86
HOMER3-207ENST00000594794 C9orf84Q5VXU9 1444 aa39.14■■■■□ 3.86
HOMER3-207ENST00000594794 CDC42BPBQ9Y5S2 1711 aa39.12■■■■□ 3.85
HOMER3-207ENST00000594794 PREX2Q70Z35 1606 aa39.11■■■■□ 3.85
HOMER3-207ENST00000594794 LMTK3Q96Q04 1460 aa39.07■■■■□ 3.85
HOMER3-207ENST00000594794 AFAP1Q8N556 730 aa39.05■■■■□ 3.84
HOMER3-207ENST00000594794 MLH3Q9UHC1 1453 aa39.04■■■■□ 3.84
HOMER3-207ENST00000594794 ARHGEF12Q9NZN5 1544 aa39.04■■■■□ 3.84
HOMER3-207ENST00000594794 ABCC1P33527 1531 aa39.02■■■■□ 3.84
HOMER3-207ENST00000594794 FER1L4A9Z1Z3 1794 aa39.01■■■■□ 3.84
HOMER3-207ENST00000594794 REREQ9P2R6 1566 aa39.01■■■■□ 3.84
HOMER3-207ENST00000594794 CDC42BPAQ5VT25 1732 aa38.96■■■■□ 3.83
HOMER3-207ENST00000594794 MLECQ14165 292 aa38.95■■■■□ 3.83
HOMER3-207ENST00000594794 CEP162Q5TB80 1403 aa38.95■■■■□ 3.83
HOMER3-207ENST00000594794 DIP2CQ9Y2E4 1556 aa38.95■■■■□ 3.83
HOMER3-207ENST00000594794 ITSN2Q9NZM3 1697 aa38.93■■■■□ 3.82
HOMER3-207ENST00000594794 TRAPPC8Q9Y2L5 1435 aa38.92■■■■□ 3.82
HOMER3-207ENST00000594794 LOC105371045A0A1W2PR82 267 aa38.9■■■■□ 3.82
HOMER3-207ENST00000594794 AGLP35573 1532 aa38.88■■■■□ 3.81
HOMER3-207ENST00000594794 GPATCH8Q9UKJ3 1502 aaKnown RBP38.87■■■■□ 3.81
HOMER3-207ENST00000594794 ABCA6Q8N139 1617 aa38.86■■■■□ 3.81
HOMER3-207ENST00000594794 MYT1LQ9UL68 1186 aa38.86■■■■□ 3.81
HOMER3-207ENST00000594794 KIDINS220Q9ULH0 1771 aa38.8■■■■□ 3.8
HOMER3-207ENST00000594794 SAMD9LQ8IVG5 1584 aa38.79■■■■□ 3.8
HOMER3-207ENST00000594794 KIAA1107Q9UPP5 1409 aa38.79■■■■□ 3.8
HOMER3-207ENST00000594794 MTUS2Q5JR59 1369 aa38.77■■■■□ 3.8
HOMER3-207ENST00000594794 PLEKHH2Q8IVE3 1493 aa38.77■■■■□ 3.8
HOMER3-207ENST00000594794 PLPPR3Q6T4P5 718 aa38.75■■■■□ 3.79
HOMER3-207ENST00000594794 ZNF777Q9ULD5 760 aaPredicted RBP38.75■■■■□ 3.79
HOMER3-207ENST00000594794 CCNB3Q8WWL7 1395 aa38.73■■■■□ 3.79
HOMER3-207ENST00000594794 SETD1BQ9UPS6 1966 aaKnown RBP38.73■■■■□ 3.79
HOMER3-207ENST00000594794 HSPA2P54652 639 aa38.72■■■■□ 3.79
HOMER3-207ENST00000594794 SYCP2Q9BX26 1530 aa38.72■■■■□ 3.79
HOMER3-207ENST00000594794 PREX1Q8TCU6 1659 aa38.71■■■■□ 3.79
HOMER3-207ENST00000594794 CFDP1Q9UEE9 299 aaPredicted RBP38.71■■■■□ 3.79
HOMER3-207ENST00000594794 FBXO41Q8TF61 875 aa38.68■■■■□ 3.78
HOMER3-207ENST00000594794 EHBP1L1Q8N3D4 1523 aa38.67■■■■□ 3.78
HOMER3-207ENST00000594794 SPAG9O60271 1321 aaKnown RBP38.66■■■■□ 3.78
HOMER3-207ENST00000594794 CEBPAP49715 358 aaPredicted RBP38.66■■■■□ 3.78
HOMER3-207ENST00000594794 CNTLNQ9NXG0 1405 aa38.64■■■■□ 3.78
HOMER3-207ENST00000594794 HNRNPMP52272 730 aaKnown RBP eCLIP38.63■■■■□ 3.77
HOMER3-207ENST00000594794 ESF1Q9H501 851 aaKnown RBP38.6■■■■□ 3.77
HOMER3-207ENST00000594794 ATP7AQ04656 1500 aa38.59■■■■□ 3.77
HOMER3-207ENST00000594794 TIAM1Q13009 1591 aa38.58■■■■□ 3.77
HOMER3-207ENST00000594794 UHRF1BP1Q6BDS2 1440 aa38.58■■■■□ 3.77
HOMER3-207ENST00000594794 INO80Q9ULG1 1556 aaPredicted RBP38.57■■■■□ 3.77
HOMER3-207ENST00000594794 C3P01024 1663 aa38.57■■■■□ 3.76
HOMER3-207ENST00000594794 PLXNC1O60486 1568 aa38.53■■■■□ 3.76
HOMER3-207ENST00000594794 MROH2AA6NES4 1674 aa38.49■■■■□ 3.75
HOMER3-207ENST00000594794 A2MP01023 1474 aa38.49■■■■□ 3.75
HOMER3-207ENST00000594794 MBD5Q9P267 1494 aa38.49■■■■□ 3.75
HOMER3-207ENST00000594794 ZNF644Q9H582 1327 aaPredicted RBP38.49■■■■□ 3.75
HOMER3-207ENST00000594794 VPS8Q8N3P4 1428 aa38.48■■■■□ 3.75
HOMER3-207ENST00000594794 DMRT2Q9Y5R5 561 aa38.46■■■■□ 3.75
HOMER3-207ENST00000594794 RTEL1-TNFRSF6BF6WH68 1400 aa38.46■■■■□ 3.75
HOMER3-207ENST00000594794 NPATQ14207 1427 aa38.44■■■■□ 3.74
HOMER3-207ENST00000594794 SUPT6HQ7KZ85 1726 aaKnown RBP38.43■■■■□ 3.74
HOMER3-207ENST00000594794 PPP6R1Q9UPN7 881 aa38.42■■■■□ 3.74
HOMER3-207ENST00000594794 ADGBQ8N7X0 1667 aa38.42■■■■□ 3.74
HOMER3-207ENST00000594794 STRCQ7RTU9 1775 aa38.4■■■■□ 3.74
HOMER3-207ENST00000594794 NCOA2Q15596 1464 aa38.4■■■■□ 3.74
HOMER3-207ENST00000594794 RSPH4AQ5TD94 716 aa38.39■■■■□ 3.74
HOMER3-207ENST00000594794 ZMYM3Q14202 1370 aa38.38■■■■□ 3.73
HOMER3-207ENST00000594794 CERKQ8TCT0 537 aa38.32■■■■□ 3.72
HOMER3-207ENST00000594794 PTPRTO14522 1441 aa38.3■■■■□ 3.72
HOMER3-207ENST00000594794 CCDC141Q6ZP82 1450 aa38.3■■■■□ 3.72
HOMER3-207ENST00000594794 LRRC9Q6ZRR7 1453 aa38.29■■■■□ 3.72
HOMER3-207ENST00000594794 DHX29Q7Z478 1369 aaKnown RBP38.29■■■■□ 3.72
HOMER3-207ENST00000594794 KANK4Q5T7N3 995 aaPredicted RBP38.28■■■■□ 3.72
HOMER3-207ENST00000594794 CAMSAP2Q08AD1 1489 aa38.28■■■■□ 3.72
HOMER3-207ENST00000594794 MAP3K1Q13233 1512 aa38.28■■■■□ 3.72
HOMER3-207ENST00000594794 CLTCQ00610 1675 aaKnown RBP38.26■■■■□ 3.71
HOMER3-207ENST00000594794 GGT6Q6P531 493 aa38.25■■■■□ 3.71
HOMER3-207ENST00000594794 NCOA1Q15788 1441 aa38.22■■■■□ 3.71
HOMER3-207ENST00000594794 ARHGEF5Q12774 1597 aa38.22■■■■□ 3.71
HOMER3-207ENST00000594794 PTPRKQ15262 1439 aa38.2■■■■□ 3.71
HOMER3-207ENST00000594794 FAM135AQ9P2D6 1515 aa38.18■■■■□ 3.7
HOMER3-207ENST00000594794 ZNF142P52746 1687 aaPredicted RBP38.14■■■■□ 3.7
HOMER3-207ENST00000594794 CAMSAP1Q5T5Y3 1602 aa38.12■■■■□ 3.69
HOMER3-207ENST00000594794 TSPY4P0CV99 314 aa38.11■■■■□ 3.69
HOMER3-207ENST00000594794 TSPY10P0CW01 314 aa38.11■■■■□ 3.69
HOMER3-207ENST00000594794 MYO3AQ8NEV4 1616 aa38.11■■■■□ 3.69
HOMER3-207ENST00000594794 PLA2R1Q13018 1463 aa38.09■■■■□ 3.69
HOMER3-207ENST00000594794 MIA2Q96PC5 1412 aa38.08■■■■□ 3.69
HOMER3-207ENST00000594794 KIF3BO15066 747 aa38.07■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms