RNA–Protein interactions for RNA: ENST00000594235.1

SIN3B-203, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best)

Gene SIN3B, Length 923 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-203ENST00000594235 MAGI2Q86UL8 1455 aa31.32■■■□□ 2.6
SIN3B-203ENST00000594235 LRRIQ1Q96JM4 1722 aa31.3■■■□□ 2.6
SIN3B-203ENST00000594235 MYO5CQ9NQX4 1742 aa31.29■■■□□ 2.6
SIN3B-203ENST00000594235 EFCAB2Q5VUJ9 269 aa31.28■■■□□ 2.6
SIN3B-203ENST00000594235 CLIP1P30622 1438 aa31.26■■■□□ 2.6
SIN3B-203ENST00000594235 CASKIN1Q8WXD9 1431 aa31.25■■■□□ 2.59
SIN3B-203ENST00000594235 SIGLEC1Q9BZZ2 1709 aa31.25■■■□□ 2.59
SIN3B-203ENST00000594235 PCF11O94913 1555 aaKnown RBP31.25■■■□□ 2.59
SIN3B-203ENST00000594235 ILDR1Q86SU0 546 aaPredicted RBP31.24■■■□□ 2.59
SIN3B-203ENST00000594235 RIMS1Q86UR5 1692 aaKnown RBP31.2■■■□□ 2.59
SIN3B-203ENST00000594235 ARHGAP5Q13017 1502 aa31.19■■■□□ 2.58
SIN3B-203ENST00000594235 CCDC18Q5T9S5 1454 aa31.19■■■□□ 2.58
SIN3B-203ENST00000594235 ZNF518AQ6AHZ1 1483 aa31.15■■■□□ 2.58
SIN3B-203ENST00000594235 ATP10AO60312 1499 aa31.14■■■□□ 2.58
SIN3B-203ENST00000594235 LMTK3Q96Q04 1460 aa31.13■■■□□ 2.57
SIN3B-203ENST00000594235 C9orf84Q5VXU9 1444 aa31.12■■■□□ 2.57
SIN3B-203ENST00000594235 FYCO1Q9BQS8 1478 aa31.12■■■□□ 2.57
SIN3B-203ENST00000594235 KDM5CP41229 1560 aa31.12■■■□□ 2.57
SIN3B-203ENST00000594235 AFAP1Q8N556 730 aa31.11■■■□□ 2.57
SIN3B-203ENST00000594235 CDC42BPBQ9Y5S2 1711 aa31.1■■■□□ 2.57
SIN3B-203ENST00000594235 MLECQ14165 292 aa31.1■■■□□ 2.57
SIN3B-203ENST00000594235 PREX2Q70Z35 1606 aa31.08■■■□□ 2.57
SIN3B-203ENST00000594235 ARHGEF12Q9NZN5 1544 aa31.04■■■□□ 2.56
SIN3B-203ENST00000594235 ABCC1P33527 1531 aa31.03■■■□□ 2.56
SIN3B-203ENST00000594235 FER1L4A9Z1Z3 1794 aa31.02■■■□□ 2.56
SIN3B-203ENST00000594235 PLPPR3Q6T4P5 718 aa31.02■■■□□ 2.56
SIN3B-203ENST00000594235 TRAPPC8Q9Y2L5 1435 aa31■■■□□ 2.55
SIN3B-203ENST00000594235 MLH3Q9UHC1 1453 aa30.99■■■□□ 2.55
SIN3B-203ENST00000594235 DIP2CQ9Y2E4 1556 aa30.99■■■□□ 2.55
SIN3B-203ENST00000594235 CDC42BPAQ5VT25 1732 aa30.97■■■□□ 2.55
SIN3B-203ENST00000594235 MYT1LQ9UL68 1186 aa30.95■■■□□ 2.55
SIN3B-203ENST00000594235 REREQ9P2R6 1566 aa30.95■■■□□ 2.54
SIN3B-203ENST00000594235 ABCA6Q8N139 1617 aa30.95■■■□□ 2.54
SIN3B-203ENST00000594235 ITSN2Q9NZM3 1697 aa30.94■■■□□ 2.54
SIN3B-203ENST00000594235 HSPA2P54652 639 aa30.93■■■□□ 2.54
SIN3B-203ENST00000594235 GPATCH8Q9UKJ3 1502 aaKnown RBP30.91■■■□□ 2.54
SIN3B-203ENST00000594235 SAMD9LQ8IVG5 1584 aa30.87■■■□□ 2.53
SIN3B-203ENST00000594235 CEBPAP49715 358 aaPredicted RBP30.86■■■□□ 2.53
SIN3B-203ENST00000594235 AGLP35573 1532 aa30.85■■■□□ 2.53
SIN3B-203ENST00000594235 KIDINS220Q9ULH0 1771 aa30.84■■■□□ 2.53
SIN3B-203ENST00000594235 ZNF777Q9ULD5 760 aaPredicted RBP30.84■■■□□ 2.53
SIN3B-203ENST00000594235 SYCP2Q9BX26 1530 aa30.83■■■□□ 2.53
SIN3B-203ENST00000594235 MTUS2Q5JR59 1369 aa30.79■■■□□ 2.52
SIN3B-203ENST00000594235 FBXO41Q8TF61 875 aa30.79■■■□□ 2.52
SIN3B-203ENST00000594235 CCNB3Q8WWL7 1395 aa30.79■■■□□ 2.52
SIN3B-203ENST00000594235 CEP162Q5TB80 1403 aa30.78■■■□□ 2.52
SIN3B-203ENST00000594235 HNRNPMP52272 730 aaKnown RBP eCLIP30.77■■■□□ 2.52
SIN3B-203ENST00000594235 CFDP1Q9UEE9 299 aaPredicted RBP30.77■■■□□ 2.52
SIN3B-203ENST00000594235 KIAA1107Q9UPP5 1409 aa30.77■■■□□ 2.52
SIN3B-203ENST00000594235 PREX1Q8TCU6 1659 aa30.77■■■□□ 2.52
SIN3B-203ENST00000594235 PLEKHH2Q8IVE3 1493 aa30.74■■■□□ 2.51
SIN3B-203ENST00000594235 SPAG9O60271 1321 aaKnown RBP30.73■■■□□ 2.51
SIN3B-203ENST00000594235 EHBP1L1Q8N3D4 1523 aa30.7■■■□□ 2.51
SIN3B-203ENST00000594235 C3P01024 1663 aa30.68■■■□□ 2.5
SIN3B-203ENST00000594235 ATP7AQ04656 1500 aa30.68■■■□□ 2.5
SIN3B-203ENST00000594235 TIAM1Q13009 1591 aa30.68■■■□□ 2.5
SIN3B-203ENST00000594235 UHRF1BP1Q6BDS2 1440 aa30.68■■■□□ 2.5
SIN3B-203ENST00000594235 ESF1Q9H501 851 aaKnown RBP30.67■■■□□ 2.5
SIN3B-203ENST00000594235 INO80Q9ULG1 1556 aaPredicted RBP30.66■■■□□ 2.5
SIN3B-203ENST00000594235 SETD1BQ9UPS6 1966 aaKnown RBP30.66■■■□□ 2.5
SIN3B-203ENST00000594235 CNTLNQ9NXG0 1405 aa30.65■■■□□ 2.5
SIN3B-203ENST00000594235 ZNF644Q9H582 1327 aaPredicted RBP30.64■■■□□ 2.5
SIN3B-203ENST00000594235 PLXNC1O60486 1568 aa30.62■■■□□ 2.49
SIN3B-203ENST00000594235 A2MP01023 1474 aa30.6■■■□□ 2.49
SIN3B-203ENST00000594235 MBD5Q9P267 1494 aa30.59■■■□□ 2.49
SIN3B-203ENST00000594235 SUPT6HQ7KZ85 1726 aaKnown RBP30.58■■■□□ 2.49
SIN3B-203ENST00000594235 STRCQ7RTU9 1775 aa30.57■■■□□ 2.48
SIN3B-203ENST00000594235 MROH2AA6NES4 1674 aa30.54■■■□□ 2.48
SIN3B-203ENST00000594235 CERKQ8TCT0 537 aa30.53■■■□□ 2.48
SIN3B-203ENST00000594235 ZMYM3Q14202 1370 aa30.53■■■□□ 2.48
SIN3B-203ENST00000594235 NCOA2Q15596 1464 aa30.52■■■□□ 2.48
SIN3B-203ENST00000594235 NPATQ14207 1427 aa30.51■■■□□ 2.47
SIN3B-203ENST00000594235 DMRT2Q9Y5R5 561 aa30.51■■■□□ 2.47
SIN3B-203ENST00000594235 LOC105371045A0A1W2PR82 267 aa30.49■■■□□ 2.47
SIN3B-203ENST00000594235 RTEL1-TNFRSF6BF6WH68 1400 aa30.48■■■□□ 2.47
SIN3B-203ENST00000594235 ADGBQ8N7X0 1667 aa30.48■■■□□ 2.47
SIN3B-203ENST00000594235 VPS8Q8N3P4 1428 aa30.46■■■□□ 2.47
SIN3B-203ENST00000594235 CLTCQ00610 1675 aaKnown RBP30.46■■■□□ 2.47
SIN3B-203ENST00000594235 GGT6Q6P531 493 aa30.45■■■□□ 2.47
SIN3B-203ENST00000594235 CAMSAP2Q08AD1 1489 aa30.44■■■□□ 2.46
SIN3B-203ENST00000594235 PTPRTO14522 1441 aa30.43■■■□□ 2.46
SIN3B-203ENST00000594235 CCDC141Q6ZP82 1450 aa30.43■■■□□ 2.46
SIN3B-203ENST00000594235 NCOA1Q15788 1441 aa30.42■■■□□ 2.46
SIN3B-203ENST00000594235 DHX29Q7Z478 1369 aaKnown RBP30.41■■■□□ 2.46
SIN3B-203ENST00000594235 PPP6R1Q9UPN7 881 aa30.4■■■□□ 2.46
SIN3B-203ENST00000594235 PTPRKQ15262 1439 aa30.39■■■□□ 2.46
SIN3B-203ENST00000594235 LRRC9Q6ZRR7 1453 aa30.39■■■□□ 2.46
SIN3B-203ENST00000594235 RSPH4AQ5TD94 716 aa30.36■■■□□ 2.45
SIN3B-203ENST00000594235 CAMSAP1Q5T5Y3 1602 aa30.34■■■□□ 2.45
SIN3B-203ENST00000594235 MYO3AQ8NEV4 1616 aa30.33■■■□□ 2.45
SIN3B-203ENST00000594235 ARHGEF5Q12774 1597 aa30.32■■■□□ 2.45
SIN3B-203ENST00000594235 MAP3K1Q13233 1512 aa30.3■■■□□ 2.44
SIN3B-203ENST00000594235 ZNF142P52746 1687 aaPredicted RBP30.3■■■□□ 2.44
SIN3B-203ENST00000594235 KIF3BO15066 747 aa30.29■■■□□ 2.44
SIN3B-203ENST00000594235 KANK4Q5T7N3 995 aaPredicted RBP30.29■■■□□ 2.44
SIN3B-203ENST00000594235 CEP170BQ9Y4F5 1589 aaPredicted RBP30.28■■■□□ 2.44
SIN3B-203ENST00000594235 LTBP4Q8N2S1 1624 aa30.25■■■□□ 2.43
SIN3B-203ENST00000594235 PLA2R1Q13018 1463 aa30.25■■■□□ 2.43
SIN3B-203ENST00000594235 NCKAP5LQ9HCH0 1330 aa30.23■■■□□ 2.43
SIN3B-203ENST00000594235 TSPY4P0CV99 314 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms