RNA–Protein interactions for RNA: ENST00000594235.1

SIN3B-203, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best)

Gene SIN3B, Length 923 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-203ENST00000594235 NISCHQ9Y2I1 1504 aa47.86■■■■■ 5.25
SIN3B-203ENST00000594235 CCDC180Q9P1Z9 1646 aa42.86■■■■■ 4.45
SIN3B-203ENST00000594235 ABCC9O60706 1549 aa42.8■■■■■ 4.44
SIN3B-203ENST00000594235 RB1CC1Q8TDY2 1594 aa40.76■■■■■ 4.12
SIN3B-203ENST00000594235 NACADO15069 1562 aa40.52■■■■■ 4.08
SIN3B-203ENST00000594235 DCAF8L2P0C7V8 631 aa40.29■■■■■ 4.04
SIN3B-203ENST00000594235 DNAJC5BQ9UF47 199 aa40.11■■■■■ 4.01
SIN3B-203ENST00000594235 MYO15BQ96JP2 1530 aa40.03■■■■■ 4
SIN3B-203ENST00000594235 PABPN1Q86U42 306 aaKnown RBP eCLIP39.87■■■■□ 3.972e-6■□□□□ 9.6
SIN3B-203ENST00000594235 UNC13AQ9UPW8 1703 aa39.81■■■■□ 3.96
SIN3B-203ENST00000594235 ZCCHC6Q5VYS8 1495 aaKnown RBP39.7■■■■□ 3.95
SIN3B-203ENST00000594235 BICRAQ9NZM4 1560 aa39.62■■■■□ 3.93
SIN3B-203ENST00000594235 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
SIN3B-203ENST00000594235 SHROOM4Q9ULL8 1493 aa39.09■■■■□ 3.85
SIN3B-203ENST00000594235 SCRIBQ14160 1630 aa39.07■■■■□ 3.85
SIN3B-203ENST00000594235 CC2D2AQ9P2K1 1620 aa38.66■■■■□ 3.78
SIN3B-203ENST00000594235 EIF4G1Q04637 1599 aaKnown RBP38.62■■■■□ 3.77
SIN3B-203ENST00000594235 CECR2Q9BXF3 1484 aa38.55■■■■□ 3.76
SIN3B-203ENST00000594235 NCAPD3P42695 1498 aa37.44■■■■□ 3.58
SIN3B-203ENST00000594235 ATAD2BQ9ULI0 1458 aa37.33■■■■□ 3.57
SIN3B-203ENST00000594235 SMARCA4P51532 1647 aa37.29■■■■□ 3.56
SIN3B-203ENST00000594235 SMARCA2P51531 1590 aa37.21■■■■□ 3.55
SIN3B-203ENST00000594235 HMGXB3Q12766 1538 aa37.15■■■■□ 3.54
SIN3B-203ENST00000594235 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
SIN3B-203ENST00000594235 PEG3Q9GZU2 1588 aa36.96■■■■□ 3.51
SIN3B-203ENST00000594235 BAZ1BQ9UIG0 1483 aaKnown RBP36.95■■■■□ 3.51
SIN3B-203ENST00000594235 ERCC6Q03468 1493 aa36.93■■■■□ 3.5
SIN3B-203ENST00000594235 MROH2BQ7Z745 1585 aa36.88■■■■□ 3.49
SIN3B-203ENST00000594235 CUX2O14529 1486 aa36.85■■■■□ 3.49
SIN3B-203ENST00000594235 NESP48681 1621 aa36.81■■■■□ 3.48
SIN3B-203ENST00000594235 DNAJC5Q9H3Z4 198 aa36.74■■■■□ 3.47
SIN3B-203ENST00000594235 LAMC3Q9Y6N6 1575 aa36.54■■■■□ 3.44
SIN3B-203ENST00000594235 WIZO95785 1651 aa36.41■■■■□ 3.42
SIN3B-203ENST00000594235 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
SIN3B-203ENST00000594235 PDS5BQ9NTI5 1447 aa36.34■■■■□ 3.41
SIN3B-203ENST00000594235 KIF21AQ7Z4S6 1674 aa36.29■■■■□ 3.4
SIN3B-203ENST00000594235 CADPSQ9ULU8 1353 aa36.29■■■■□ 3.4
SIN3B-203ENST00000594235 RSF1Q96T23 1441 aaPredicted RBP36.17■■■■□ 3.38
SIN3B-203ENST00000594235 MRC2Q9UBG0 1479 aa36.03■■■■□ 3.36
SIN3B-203ENST00000594235 TOP2AP11388 1531 aaKnown RBP35.98■■■■□ 3.35
SIN3B-203ENST00000594235 WDR62O43379 1518 aa35.94■■■■□ 3.34
SIN3B-203ENST00000594235 CFTRP13569 1480 aa35.91■■■■□ 3.34
SIN3B-203ENST00000594235 CEP164Q9UPV0 1460 aa35.9■■■■□ 3.34
SIN3B-203ENST00000594235 FANCD2Q9BXW9 1451 aa35.87■■■■□ 3.33
SIN3B-203ENST00000594235 URB2Q14146 1524 aaKnown RBP35.59■■■■□ 3.29
SIN3B-203ENST00000594235 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
SIN3B-203ENST00000594235 PRDM2Q13029 1718 aa35.47■■■■□ 3.27
SIN3B-203ENST00000594235 TOPBP1Q92547 1522 aa35.21■■■■□ 3.23
SIN3B-203ENST00000594235 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
SIN3B-203ENST00000594235 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
SIN3B-203ENST00000594235 ZNF608Q9ULD9 1512 aaPredicted RBP35.14■■■■□ 3.22
SIN3B-203ENST00000594235 TRIM41Q8WV44 630 aa35.12■■■■□ 3.21
SIN3B-203ENST00000594235 ABCC8Q09428 1581 aa35.11■■■■□ 3.21
SIN3B-203ENST00000594235 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
SIN3B-203ENST00000594235 EIF4G3O43432 1585 aaKnown RBP34.92■■■■□ 3.18
SIN3B-203ENST00000594235 TARBP1Q13395 1621 aaKnown RBP34.88■■■■□ 3.17
SIN3B-203ENST00000594235 POLA1P09884 1462 aaPredicted RBP34.86■■■■□ 3.17
SIN3B-203ENST00000594235 AQRO60306 1485 aaKnown RBP eCLIP34.82■■■■□ 3.163e-6■■□□□ 13.8
SIN3B-203ENST00000594235 RAD54L2Q9Y4B4 1467 aa34.73■■■■□ 3.15
SIN3B-203ENST00000594235 RIMBP3CA6NJZ7 1639 aa34.7■■■■□ 3.15
SIN3B-203ENST00000594235 RIMBP3BA6NNM3 1639 aa34.7■■■■□ 3.15
SIN3B-203ENST00000594235 RIMBP3Q9UFD9 1639 aa34.7■■■■□ 3.15
SIN3B-203ENST00000594235 SOGA1O94964 1423 aa34.69■■■■□ 3.14
SIN3B-203ENST00000594235 CUX1P39880 1505 aa34.65■■■■□ 3.14
SIN3B-203ENST00000594235 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
SIN3B-203ENST00000594235 TDRD9Q8NDG6 1382 aaKnown RBP34.62■■■■□ 3.13
SIN3B-203ENST00000594235 ARHGEF11O15085 1522 aa34.62■■■■□ 3.13
SIN3B-203ENST00000594235 CHD1O14646 1710 aa34.61■■■■□ 3.13
SIN3B-203ENST00000594235 SUPT5HO00267 1087 aaKnown RBP34.57■■■■□ 3.12
SIN3B-203ENST00000594235 WDR97A6NE52 1622 aa34.52■■■■□ 3.12
SIN3B-203ENST00000594235 FBLN2P98095 1184 aa34.52■■■■□ 3.12
SIN3B-203ENST00000594235 SNAPC4Q5SXM2 1469 aa34.46■■■■□ 3.11
SIN3B-203ENST00000594235 GRIN2BQ13224 1484 aa34.38■■■■□ 3.09
SIN3B-203ENST00000594235 MAGI1Q96QZ7 1491 aaPredicted RBP34.38■■■■□ 3.09
SIN3B-203ENST00000594235 CYB5RLQ6IPT4 315 aa34.34■■■■□ 3.09
SIN3B-203ENST00000594235 ARAP1Q96P48 1450 aa34.31■■■■□ 3.08
SIN3B-203ENST00000594235 CHMP7Q8WUX9 453 aaPredicted RBP34.3■■■■□ 3.08
SIN3B-203ENST00000594235 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
SIN3B-203ENST00000594235 CLASP1Q7Z460 1538 aa34.27■■■■□ 3.08
SIN3B-203ENST00000594235 ABCA10Q8WWZ4 1543 aa34.27■■■■□ 3.08
SIN3B-203ENST00000594235 SYNJ2O15056 1496 aa34.27■■■■□ 3.08
SIN3B-203ENST00000594235 SYNJ1O43426 1573 aa34.22■■■■□ 3.07
SIN3B-203ENST00000594235 PBRM1Q86U86 1689 aa34.21■■■■□ 3.07
SIN3B-203ENST00000594235 ABCA5Q8WWZ7 1642 aa34.19■■■■□ 3.06
SIN3B-203ENST00000594235 WRNQ14191 1432 aaPredicted RBP eCLIP34.14■■■■□ 3.06
SIN3B-203ENST00000594235 TOP2BQ02880 1626 aa34.1■■■■□ 3.05
SIN3B-203ENST00000594235 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
SIN3B-203ENST00000594235 GRIN2AQ12879 1464 aa33.95■■■■□ 3.02
SIN3B-203ENST00000594235 ADAMTS12P58397 1594 aa33.94■■■■□ 3.02
SIN3B-203ENST00000594235 TRHP20396 242 aaPredicted RBP33.9■■■■□ 3.02
SIN3B-203ENST00000594235 NUP160Q12769 1436 aa33.86■■■■□ 3.01
SIN3B-203ENST00000594235 FHAD1B1AJZ9 1412 aa33.85■■■■□ 3.01
SIN3B-203ENST00000594235 ERICH3Q5RHP9 1530 aa33.83■■■■□ 3.01
SIN3B-203ENST00000594235 CEP170Q5SW79 1584 aa33.82■■■■□ 3
SIN3B-203ENST00000594235 ERCC6L2Q5T890 1561 aa33.75■■■□□ 2.99
SIN3B-203ENST00000594235 SHROOM2Q13796 1616 aa33.66■■■□□ 2.98
SIN3B-203ENST00000594235 PRG4Q92954 1404 aaPredicted RBP33.49■■■□□ 2.95
SIN3B-203ENST00000594235 JPH4Q96JJ6 628 aa33.47■■■□□ 2.95
SIN3B-203ENST00000594235 RUSC2Q8N2Y8 1516 aa33.46■■■□□ 2.95
SIN3B-203ENST00000594235 IGF1RP08069 1367 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms