RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CCNB3Q8WWL7 1395 aa23.37■■□□□ 1.33
DDX39A-221ENST00000593026 CDC42BPBQ9Y5S2 1711 aa23.36■■□□□ 1.33
DDX39A-221ENST00000593026 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
DDX39A-221ENST00000593026 EFCAB2Q5VUJ9 269 aa23.35■■□□□ 1.33
DDX39A-221ENST00000593026 GPATCH8Q9UKJ3 1502 aaKnown RBP23.34■■□□□ 1.33
DDX39A-221ENST00000593026 COL17A1Q9UMD9 1497 aaPredicted RBP23.34■■□□□ 1.33
DDX39A-221ENST00000593026 AKNAQ7Z591 1439 aa23.33■■□□□ 1.33
DDX39A-221ENST00000593026 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
DDX39A-221ENST00000593026 ADGRL1O94910 1474 aa23.29■■□□□ 1.32
DDX39A-221ENST00000593026 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
DDX39A-221ENST00000593026 DENND4BO75064 1496 aaPredicted RBP23.25■■□□□ 1.31
DDX39A-221ENST00000593026 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
DDX39A-221ENST00000593026 ZNF777Q9ULD5 760 aaPredicted RBP23.24■■□□□ 1.31
DDX39A-221ENST00000593026 SAMD9LQ8IVG5 1584 aa23.23■■□□□ 1.31
DDX39A-221ENST00000593026 RAPGEF3O95398 923 aa23.22■■□□□ 1.31
DDX39A-221ENST00000593026 ABCC1P33527 1531 aa23.22■■□□□ 1.31
DDX39A-221ENST00000593026 FRMPD1Q5SYB0 1578 aa23.21■■□□□ 1.31
DDX39A-221ENST00000593026 RICTORQ6R327 1708 aa23.21■■□□□ 1.31
DDX39A-221ENST00000593026 MYOM3Q5VTT5 1437 aa23.2■■□□□ 1.3
DDX39A-221ENST00000593026 POGZQ7Z3K3 1410 aa23.19■■□□□ 1.3
DDX39A-221ENST00000593026 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
DDX39A-221ENST00000593026 PLEKHH2Q8IVE3 1493 aa23.18■■□□□ 1.3
DDX39A-221ENST00000593026 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
DDX39A-221ENST00000593026 ZNF518AQ6AHZ1 1483 aa23.16■■□□□ 1.3
DDX39A-221ENST00000593026 ARHGEF12Q9NZN5 1544 aa23.15■■□□□ 1.3
DDX39A-221ENST00000593026 MIA2Q96PC5 1412 aa23.15■■□□□ 1.3
DDX39A-221ENST00000593026 ZNF644Q9H582 1327 aaPredicted RBP23.14■■□□□ 1.3
DDX39A-221ENST00000593026 CAMSAP2Q08AD1 1489 aa23.14■■□□□ 1.29
DDX39A-221ENST00000593026 KIAA1107Q9UPP5 1409 aa23.14■■□□□ 1.29
DDX39A-221ENST00000593026 ZMYM4Q5VZL5 1548 aa23.13■■□□□ 1.29
DDX39A-221ENST00000593026 PPARGC1BQ86YN6 1023 aaKnown RBP23.13■■□□□ 1.29
DDX39A-221ENST00000593026 TRAPPC8Q9Y2L5 1435 aa23.12■■□□□ 1.29
DDX39A-221ENST00000593026 KDM5CP41229 1560 aa23.1■■□□□ 1.29
DDX39A-221ENST00000593026 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.296e-15■■■■■ 35.3
DDX39A-221ENST00000593026 AFAP1Q8N556 730 aa23.1■■□□□ 1.29
DDX39A-221ENST00000593026 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.29
DDX39A-221ENST00000593026 MAGI2Q86UL8 1455 aa23.07■■□□□ 1.28
DDX39A-221ENST00000593026 MBD5Q9P267 1494 aa23.06■■□□□ 1.28
DDX39A-221ENST00000593026 PTPN23Q9H3S7 1636 aa23.06■■□□□ 1.28
DDX39A-221ENST00000593026 ZFYVE16Q7Z3T8 1539 aa23.06■■□□□ 1.28
DDX39A-221ENST00000593026 HECW2Q9P2P5 1572 aa23.06■■□□□ 1.28
DDX39A-221ENST00000593026 ARHGEF40Q8TER5 1519 aa23.05■■□□□ 1.28
DDX39A-221ENST00000593026 MYT1LQ9UL68 1186 aa23.03■■□□□ 1.28
DDX39A-221ENST00000593026 MLH3Q9UHC1 1453 aa23.03■■□□□ 1.28
DDX39A-221ENST00000593026 ARHGEF5Q12774 1597 aa23.02■■□□□ 1.28
DDX39A-221ENST00000593026 YEATS2Q9ULM3 1422 aa23.02■■□□□ 1.28
DDX39A-221ENST00000593026 TCOF1Q13428 1488 aaKnown RBP23.02■■□□□ 1.28
DDX39A-221ENST00000593026 CCDC141Q6ZP82 1450 aa23.02■■□□□ 1.28
DDX39A-221ENST00000593026 RSPH4AQ5TD94 716 aa23■■□□□ 1.27
DDX39A-221ENST00000593026 SPAG9O60271 1321 aaKnown RBP23■■□□□ 1.27
DDX39A-221ENST00000593026 ATP7AQ04656 1500 aa22.98■■□□□ 1.27
DDX39A-221ENST00000593026 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
DDX39A-221ENST00000593026 KIDINS220Q9ULH0 1771 aa22.97■■□□□ 1.27
DDX39A-221ENST00000593026 ABCA6Q8N139 1617 aa22.95■■□□□ 1.26
DDX39A-221ENST00000593026 DIP2CQ9Y2E4 1556 aa22.95■■□□□ 1.26
DDX39A-221ENST00000593026 ATP10AO60312 1499 aa22.94■■□□□ 1.26
DDX39A-221ENST00000593026 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
DDX39A-221ENST00000593026 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
DDX39A-221ENST00000593026 RTEL1-TNFRSF6BF6WH68 1400 aa22.92■■□□□ 1.26
DDX39A-221ENST00000593026 C9orf84Q5VXU9 1444 aa22.92■■□□□ 1.26
DDX39A-221ENST00000593026 KDM4FA0A1W2PPD8 638 aa22.92■■□□□ 1.26
DDX39A-221ENST00000593026 TSPY4P0CV99 314 aa22.92■■□□□ 1.26
DDX39A-221ENST00000593026 TSPY10P0CW01 314 aa22.92■■□□□ 1.26
DDX39A-221ENST00000593026 CROCC2H7BZ55 1655 aa22.9■■□□□ 1.26
DDX39A-221ENST00000593026 DAPK1P53355 1430 aa22.9■■□□□ 1.26
DDX39A-221ENST00000593026 MAST1Q9Y2H9 1570 aa22.89■■□□□ 1.26
DDX39A-221ENST00000593026 ABCC5O15440 1437 aa22.89■■□□□ 1.25
DDX39A-221ENST00000593026 ARID4BQ4LE39 1312 aaPredicted RBP22.88■■□□□ 1.25
DDX39A-221ENST00000593026 SHANK2Q9UPX8 1470 aa22.88■■□□□ 1.25
DDX39A-221ENST00000593026 REREQ9P2R6 1566 aa22.88■■□□□ 1.25
DDX39A-221ENST00000593026 SIGLEC1Q9BZZ2 1709 aa22.86■■□□□ 1.25
DDX39A-221ENST00000593026 RRBP1Q9P2E9 1410 aaKnown RBP22.86■■□□□ 1.25
DDX39A-221ENST00000593026 ADGBQ8N7X0 1667 aa22.85■■□□□ 1.25
DDX39A-221ENST00000593026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.85■■□□□ 1.25
DDX39A-221ENST00000593026 A2MP01023 1474 aa22.83■■□□□ 1.25
DDX39A-221ENST00000593026 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
DDX39A-221ENST00000593026 AGLP35573 1532 aa22.8■■□□□ 1.24
DDX39A-221ENST00000593026 BCORL1Q5H9F3 1711 aa22.79■■□□□ 1.24
DDX39A-221ENST00000593026 CHIC2Q9UKJ5 165 aa22.77■■□□□ 1.24
DDX39A-221ENST00000593026 DHX29Q7Z478 1369 aaKnown RBP22.76■■□□□ 1.23
DDX39A-221ENST00000593026 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
DDX39A-221ENST00000593026 ADGRL2O95490 1459 aa22.74■■□□□ 1.23
DDX39A-221ENST00000593026 ITGAEP38570 1179 aa22.74■■□□□ 1.23
DDX39A-221ENST00000593026 MLECQ14165 292 aa22.74■■□□□ 1.23
DDX39A-221ENST00000593026 ADAMTSL3P82987 1691 aa22.74■■□□□ 1.23
DDX39A-221ENST00000593026 KIF15Q9NS87 1388 aa22.74■■□□□ 1.23
DDX39A-221ENST00000593026 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
DDX39A-221ENST00000593026 DUOX2Q9NRD8 1548 aa22.72■■□□□ 1.23
DDX39A-221ENST00000593026 RRP7BPQ9NSQ0 103 aa22.72■■□□□ 1.23
DDX39A-221ENST00000593026 NCOA1Q15788 1441 aa22.72■■□□□ 1.23
DDX39A-221ENST00000593026 MADDQ8WXG6 1647 aa22.69■■□□□ 1.22
DDX39A-221ENST00000593026 EIF2AK4Q9P2K8 1649 aaKnown RBP22.68■■□□□ 1.22
DDX39A-221ENST00000593026 ROCK1Q13464 1354 aa22.67■■□□□ 1.22
DDX39A-221ENST00000593026 ERBINQ96RT1 1412 aa22.66■■□□□ 1.22
DDX39A-221ENST00000593026 FER1L4A9Z1Z3 1794 aa22.66■■□□□ 1.22
DDX39A-221ENST00000593026 KIF3BO15066 747 aa22.66■■□□□ 1.22
DDX39A-221ENST00000593026 GGT6Q6P531 493 aa22.64■■□□□ 1.21
DDX39A-221ENST00000593026 RIMS1Q86UR5 1692 aaKnown RBP22.64■■□□□ 1.21
DDX39A-221ENST00000593026 RNF17Q9BXT8 1623 aaKnown RBP22.61■■□□□ 1.21
DDX39A-221ENST00000593026 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms