RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 STRCQ7RTU9 1775 aa18.9■□□□□ 0.62
DDX39A-219ENST00000592927 TTC37Q6PGP7 1564 aa18.89■□□□□ 0.62
DDX39A-219ENST00000592927 FMN1Q68DA7 1419 aa18.89■□□□□ 0.61
DDX39A-219ENST00000592927 SIGLEC1Q9BZZ2 1709 aa18.88■□□□□ 0.61
DDX39A-219ENST00000592927 PTPRTO14522 1441 aa18.88■□□□□ 0.61
DDX39A-219ENST00000592927 PREX1Q8TCU6 1659 aa18.86■□□□□ 0.61
DDX39A-219ENST00000592927 ZFYVE16Q7Z3T8 1539 aa18.86■□□□□ 0.61
DDX39A-219ENST00000592927 RICTORQ6R327 1708 aa18.86■□□□□ 0.61
DDX39A-219ENST00000592927 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
DDX39A-219ENST00000592927 UHRF1BP1Q6BDS2 1440 aa18.85■□□□□ 0.61
DDX39A-219ENST00000592927 FER1L4A9Z1Z3 1794 aa18.84■□□□□ 0.61
DDX39A-219ENST00000592927 IQSEC2Q5JU85 1478 aa18.84■□□□□ 0.61
DDX39A-219ENST00000592927 ZMYM4Q5VZL5 1548 aa18.82■□□□□ 0.6
DDX39A-219ENST00000592927 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
DDX39A-219ENST00000592927 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
DDX39A-219ENST00000592927 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
DDX39A-219ENST00000592927 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
DDX39A-219ENST00000592927 ATP1B4Q9UN42 357 aaPredicted RBP18.81■□□□□ 0.6
DDX39A-219ENST00000592927 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
DDX39A-219ENST00000592927 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.59
DDX39A-219ENST00000592927 HECW1Q76N89 1606 aa18.76■□□□□ 0.59
DDX39A-219ENST00000592927 ATP10AO60312 1499 aa18.76■□□□□ 0.59
DDX39A-219ENST00000592927 CASKIN1Q8WXD9 1431 aa18.75■□□□□ 0.59
DDX39A-219ENST00000592927 SCAPERQ9BY12 1400 aa18.73■□□□□ 0.59
DDX39A-219ENST00000592927 C9orf84Q5VXU9 1444 aa18.72■□□□□ 0.59
DDX39A-219ENST00000592927 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
DDX39A-219ENST00000592927 FYCO1Q9BQS8 1478 aa18.71■□□□□ 0.59
DDX39A-219ENST00000592927 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
DDX39A-219ENST00000592927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.69■□□□□ 0.587e-7■■□□□ 14.3
DDX39A-219ENST00000592927 ZNF335Q9H4Z2 1342 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-219ENST00000592927 NCOA1Q15788 1441 aa18.67■□□□□ 0.58
DDX39A-219ENST00000592927 HSPA1LP34931 641 aa18.67■□□□□ 0.58
DDX39A-219ENST00000592927 CCDC18Q5T9S5 1454 aa18.65■□□□□ 0.58
DDX39A-219ENST00000592927 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
DDX39A-219ENST00000592927 MED1Q15648 1581 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-219ENST00000592927 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-219ENST00000592927 NCKAP5LQ9HCH0 1330 aa18.64■□□□□ 0.57
DDX39A-219ENST00000592927 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
DDX39A-219ENST00000592927 TRAPPC8Q9Y2L5 1435 aa18.64■□□□□ 0.57
DDX39A-219ENST00000592927 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
DDX39A-219ENST00000592927 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
DDX39A-219ENST00000592927 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
DDX39A-219ENST00000592927 PLCH2O75038 1416 aa18.61■□□□□ 0.57
DDX39A-219ENST00000592927 MYT1LQ9UL68 1186 aa18.61■□□□□ 0.57
DDX39A-219ENST00000592927 PIP4K2BP78356 416 aa18.6■□□□□ 0.57
DDX39A-219ENST00000592927 EFCAB2Q5VUJ9 269 aa18.58■□□□□ 0.56
DDX39A-219ENST00000592927 AFAP1Q8N556 730 aa18.58■□□□□ 0.56
DDX39A-219ENST00000592927 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
DDX39A-219ENST00000592927 APLP2Q06481 763 aa18.57■□□□□ 0.56
DDX39A-219ENST00000592927 CAMSAP1Q5T5Y3 1602 aa18.56■□□□□ 0.56
DDX39A-219ENST00000592927 C3P01024 1663 aa18.56■□□□□ 0.56
DDX39A-219ENST00000592927 TROQ12816 1431 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-219ENST00000592927 TOM1O60784 492 aa18.52■□□□□ 0.56
DDX39A-219ENST00000592927 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.55
DDX39A-219ENST00000592927 PKD2Q13563 968 aa18.51■□□□□ 0.55
DDX39A-219ENST00000592927 ZNF518AQ6AHZ1 1483 aa18.51■□□□□ 0.55
DDX39A-219ENST00000592927 MAP3K1Q13233 1512 aa18.5■□□□□ 0.55
DDX39A-219ENST00000592927 TIAM1Q13009 1591 aa18.5■□□□□ 0.55
DDX39A-219ENST00000592927 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
DDX39A-219ENST00000592927 DIP2CQ9Y2E4 1556 aa18.47■□□□□ 0.55
DDX39A-219ENST00000592927 CNTLNQ9NXG0 1405 aa18.46■□□□□ 0.55
DDX39A-219ENST00000592927 KIF14Q15058 1648 aa18.45■□□□□ 0.54
DDX39A-219ENST00000592927 AGLP35573 1532 aa18.45■□□□□ 0.54
DDX39A-219ENST00000592927 NPATQ14207 1427 aa18.45■□□□□ 0.54
DDX39A-219ENST00000592927 REREQ9P2R6 1566 aa18.45■□□□□ 0.54
DDX39A-219ENST00000592927 LRRC9Q6ZRR7 1453 aa18.45■□□□□ 0.54
DDX39A-219ENST00000592927 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
DDX39A-219ENST00000592927 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
DDX39A-219ENST00000592927 KDM5CP41229 1560 aa18.43■□□□□ 0.54
DDX39A-219ENST00000592927 ZMYM3Q14202 1370 aa18.42■□□□□ 0.54
DDX39A-219ENST00000592927 PLA2R1Q13018 1463 aa18.41■□□□□ 0.54
DDX39A-219ENST00000592927 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
DDX39A-219ENST00000592927 TCOF1Q13428 1488 aaKnown RBP18.4■□□□□ 0.54
DDX39A-219ENST00000592927 MLH3Q9UHC1 1453 aa18.4■□□□□ 0.54
DDX39A-219ENST00000592927 ABCA6Q8N139 1617 aa18.39■□□□□ 0.53
DDX39A-219ENST00000592927 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-219ENST00000592927 ARHGAP5Q13017 1502 aa18.37■□□□□ 0.53
DDX39A-219ENST00000592927 CCNB3Q8WWL7 1395 aa18.36■□□□□ 0.53
DDX39A-219ENST00000592927 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
DDX39A-219ENST00000592927 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
DDX39A-219ENST00000592927 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
DDX39A-219ENST00000592927 CPS1P31327 1500 aa18.33■□□□□ 0.52
DDX39A-219ENST00000592927 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
DDX39A-219ENST00000592927 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
DDX39A-219ENST00000592927 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
DDX39A-219ENST00000592927 GPATCH8Q9UKJ3 1502 aaKnown RBP18.31■□□□□ 0.52
DDX39A-219ENST00000592927 CEP170BQ9Y4F5 1589 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-219ENST00000592927 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-219ENST00000592927 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
DDX39A-219ENST00000592927 MYO3AQ8NEV4 1616 aa18.28■□□□□ 0.52
DDX39A-219ENST00000592927 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
DDX39A-219ENST00000592927 ZNF142P52746 1687 aaPredicted RBP18.27■□□□□ 0.52
DDX39A-219ENST00000592927 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
DDX39A-219ENST00000592927 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
DDX39A-219ENST00000592927 ALKQ9UM73 1620 aa18.26■□□□□ 0.51
DDX39A-219ENST00000592927 POTEAQ6S8J7 498 aa18.25■□□□□ 0.51
DDX39A-219ENST00000592927 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
DDX39A-219ENST00000592927 ITSN2Q9NZM3 1697 aa18.24■□□□□ 0.51
DDX39A-219ENST00000592927 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
DDX39A-219ENST00000592927 GGT6Q6P531 493 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms