RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 POGZQ7Z3K3 1410 aa30.81■■■□□ 2.52
CCDC43-205ENST00000592333 CASKIN1Q8WXD9 1431 aa30.81■■■□□ 2.52
CCDC43-205ENST00000592333 ZFYVE16Q7Z3T8 1539 aa30.8■■■□□ 2.52
CCDC43-205ENST00000592333 CCDC18Q5T9S5 1454 aa30.79■■■□□ 2.52
CCDC43-205ENST00000592333 MADDQ8WXG6 1647 aa30.74■■■□□ 2.51
CCDC43-205ENST00000592333 LRRIQ1Q96JM4 1722 aa30.73■■■□□ 2.51
CCDC43-205ENST00000592333 YEATS2Q9ULM3 1422 aa30.73■■■□□ 2.51
CCDC43-205ENST00000592333 ZNF518AQ6AHZ1 1483 aa30.7■■■□□ 2.5
CCDC43-205ENST00000592333 FYCO1Q9BQS8 1478 aa30.69■■■□□ 2.5
CCDC43-205ENST00000592333 ARHGAP5Q13017 1502 aa30.68■■■□□ 2.5
CCDC43-205ENST00000592333 PCF11O94913 1555 aaKnown RBP30.68■■■□□ 2.5
CCDC43-205ENST00000592333 ATP10AO60312 1499 aa30.67■■■□□ 2.5
CCDC43-205ENST00000592333 C9orf84Q5VXU9 1444 aa30.63■■■□□ 2.49
CCDC43-205ENST00000592333 KDM5CP41229 1560 aa30.62■■■□□ 2.49
CCDC43-205ENST00000592333 RIMS1Q86UR5 1692 aaKnown RBP30.61■■■□□ 2.49
CCDC43-205ENST00000592333 CDC42BPBQ9Y5S2 1711 aa30.59■■■□□ 2.49
CCDC43-205ENST00000592333 SIGLEC1Q9BZZ2 1709 aa30.59■■■□□ 2.49
CCDC43-205ENST00000592333 PREX2Q70Z35 1606 aa30.58■■■□□ 2.49
CCDC43-205ENST00000592333 ILDR1Q86SU0 546 aaPredicted RBP30.56■■■□□ 2.48
CCDC43-205ENST00000592333 AFAP1Q8N556 730 aa30.55■■■□□ 2.48
CCDC43-205ENST00000592333 MLH3Q9UHC1 1453 aa30.55■■■□□ 2.48
CCDC43-205ENST00000592333 LMTK3Q96Q04 1460 aa30.54■■■□□ 2.48
CCDC43-205ENST00000592333 REREQ9P2R6 1566 aa30.53■■■□□ 2.48
CCDC43-205ENST00000592333 ARHGEF12Q9NZN5 1544 aa30.52■■■□□ 2.48
CCDC43-205ENST00000592333 ABCC1P33527 1531 aa30.51■■■□□ 2.47
CCDC43-205ENST00000592333 FER1L4A9Z1Z3 1794 aa30.49■■■□□ 2.47
CCDC43-205ENST00000592333 MLECQ14165 292 aa30.47■■■□□ 2.47
CCDC43-205ENST00000592333 CDC42BPAQ5VT25 1732 aa30.47■■■□□ 2.47
CCDC43-205ENST00000592333 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.46
CCDC43-205ENST00000592333 ITSN2Q9NZM3 1697 aa30.44■■■□□ 2.46
CCDC43-205ENST00000592333 MYT1LQ9UL68 1186 aa30.44■■■□□ 2.46
CCDC43-205ENST00000592333 TRAPPC8Q9Y2L5 1435 aa30.43■■■□□ 2.46
CCDC43-205ENST00000592333 AGLP35573 1532 aa30.42■■■□□ 2.46
CCDC43-205ENST00000592333 GPATCH8Q9UKJ3 1502 aaKnown RBP30.41■■■□□ 2.46
CCDC43-205ENST00000592333 ABCA6Q8N139 1617 aa30.38■■■□□ 2.45
CCDC43-205ENST00000592333 KIAA1107Q9UPP5 1409 aa30.37■■■□□ 2.45
CCDC43-205ENST00000592333 PLEKHH2Q8IVE3 1493 aa30.37■■■□□ 2.45
CCDC43-205ENST00000592333 MTUS2Q5JR59 1369 aa30.35■■■□□ 2.45
CCDC43-205ENST00000592333 SAMD9LQ8IVG5 1584 aa30.33■■■□□ 2.45
CCDC43-205ENST00000592333 KIDINS220Q9ULH0 1771 aa30.33■■■□□ 2.45
CCDC43-205ENST00000592333 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.44
CCDC43-205ENST00000592333 CFDP1Q9UEE9 299 aaPredicted RBP30.32■■■□□ 2.44
CCDC43-205ENST00000592333 PLPPR3Q6T4P5 718 aa30.31■■■□□ 2.44
CCDC43-205ENST00000592333 ZNF777Q9ULD5 760 aaPredicted RBP30.3■■■□□ 2.44
CCDC43-205ENST00000592333 CEP162Q5TB80 1403 aa30.3■■■□□ 2.44
CCDC43-205ENST00000592333 PREX1Q8TCU6 1659 aa30.28■■■□□ 2.44
CCDC43-205ENST00000592333 HSPA2P54652 639 aa30.28■■■□□ 2.44
CCDC43-205ENST00000592333 SYCP2Q9BX26 1530 aa30.27■■■□□ 2.44
CCDC43-205ENST00000592333 FBXO41Q8TF61 875 aa30.27■■■□□ 2.44
CCDC43-205ENST00000592333 SETD1BQ9UPS6 1966 aaKnown RBP30.26■■■□□ 2.44
CCDC43-205ENST00000592333 SPAG9O60271 1321 aaKnown RBP30.26■■■□□ 2.44
CCDC43-205ENST00000592333 ESF1Q9H501 851 aaKnown RBP30.26■■■□□ 2.43
CCDC43-205ENST00000592333 EHBP1L1Q8N3D4 1523 aa30.26■■■□□ 2.43
CCDC43-205ENST00000592333 CNTLNQ9NXG0 1405 aa30.25■■■□□ 2.43
CCDC43-205ENST00000592333 CEBPAP49715 358 aaPredicted RBP30.23■■■□□ 2.43
CCDC43-205ENST00000592333 HNRNPMP52272 730 aaKnown RBP eCLIP30.23■■■□□ 2.43
CCDC43-205ENST00000592333 UHRF1BP1Q6BDS2 1440 aa30.2■■■□□ 2.42
CCDC43-205ENST00000592333 ATP7AQ04656 1500 aa30.19■■■□□ 2.42
CCDC43-205ENST00000592333 TIAM1Q13009 1591 aa30.17■■■□□ 2.42
CCDC43-205ENST00000592333 INO80Q9ULG1 1556 aaPredicted RBP30.17■■■□□ 2.42
CCDC43-205ENST00000592333 C3P01024 1663 aa30.15■■■□□ 2.42
CCDC43-205ENST00000592333 DMRT2Q9Y5R5 561 aa30.15■■■□□ 2.42
CCDC43-205ENST00000592333 A2MP01023 1474 aa30.12■■■□□ 2.41
CCDC43-205ENST00000592333 PLXNC1O60486 1568 aa30.11■■■□□ 2.41
CCDC43-205ENST00000592333 PPP6R1Q9UPN7 881 aa30.11■■■□□ 2.41
CCDC43-205ENST00000592333 RTEL1-TNFRSF6BF6WH68 1400 aa30.11■■■□□ 2.41
CCDC43-205ENST00000592333 MBD5Q9P267 1494 aa30.11■■■□□ 2.41
CCDC43-205ENST00000592333 MROH2AA6NES4 1674 aa30.11■■■□□ 2.41
CCDC43-205ENST00000592333 NPATQ14207 1427 aa30.09■■■□□ 2.41
CCDC43-205ENST00000592333 RSPH4AQ5TD94 716 aa30.09■■■□□ 2.41
CCDC43-205ENST00000592333 SUPT6HQ7KZ85 1726 aaKnown RBP30.06■■■□□ 2.4
CCDC43-205ENST00000592333 ADGBQ8N7X0 1667 aa30.06■■■□□ 2.4
CCDC43-205ENST00000592333 ZNF644Q9H582 1327 aaPredicted RBP30.04■■■□□ 2.4
CCDC43-205ENST00000592333 NCOA2Q15596 1464 aa30.04■■■□□ 2.4
CCDC43-205ENST00000592333 ZMYM3Q14202 1370 aa30.03■■■□□ 2.4
CCDC43-205ENST00000592333 VPS8Q8N3P4 1428 aa30.03■■■□□ 2.4
CCDC43-205ENST00000592333 STRCQ7RTU9 1775 aa30■■■□□ 2.39
CCDC43-205ENST00000592333 CERKQ8TCT0 537 aa29.99■■■□□ 2.39
CCDC43-205ENST00000592333 PTPRTO14522 1441 aa29.97■■■□□ 2.39
CCDC43-205ENST00000592333 MAP3K1Q13233 1512 aa29.97■■■□□ 2.39
CCDC43-205ENST00000592333 DHX29Q7Z478 1369 aaKnown RBP29.97■■■□□ 2.39
CCDC43-205ENST00000592333 CCDC141Q6ZP82 1450 aa29.97■■■□□ 2.39
CCDC43-205ENST00000592333 CAMSAP2Q08AD1 1489 aa29.94■■■□□ 2.38
CCDC43-205ENST00000592333 GGT6Q6P531 493 aa29.94■■■□□ 2.38
CCDC43-205ENST00000592333 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
CCDC43-205ENST00000592333 LOC105371045A0A1W2PR82 267 aa29.93■■■□□ 2.38
CCDC43-205ENST00000592333 CLTCQ00610 1675 aaKnown RBP29.91■■■□□ 2.38
CCDC43-205ENST00000592333 ARHGEF5Q12774 1597 aa29.9■■■□□ 2.38
CCDC43-205ENST00000592333 FAM135AQ9P2D6 1515 aa29.9■■■□□ 2.38
CCDC43-205ENST00000592333 NCOA1Q15788 1441 aa29.89■■■□□ 2.38
CCDC43-205ENST00000592333 PTPRKQ15262 1439 aa29.88■■■□□ 2.37
CCDC43-205ENST00000592333 TSPY4P0CV99 314 aa29.87■■■□□ 2.37
CCDC43-205ENST00000592333 TSPY10P0CW01 314 aa29.87■■■□□ 2.37
CCDC43-205ENST00000592333 ZNF142P52746 1687 aaPredicted RBP29.82■■■□□ 2.36
CCDC43-205ENST00000592333 MIA2Q96PC5 1412 aa29.82■■■□□ 2.36
CCDC43-205ENST00000592333 CAMSAP1Q5T5Y3 1602 aa29.81■■■□□ 2.36
CCDC43-205ENST00000592333 PLA2R1Q13018 1463 aa29.8■■■□□ 2.36
CCDC43-205ENST00000592333 KIF3BO15066 747 aa29.8■■■□□ 2.36
CCDC43-205ENST00000592333 MYO3AQ8NEV4 1616 aa29.79■■■□□ 2.36
CCDC43-205ENST00000592333 PKD2Q13563 968 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms