RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 CDC42BPBQ9Y5S2 1711 aa34.19■■■■□ 3.06
SPHK1-210ENST00000592299 ARHGAP5Q13017 1502 aa34.15■■■■□ 3.06
SPHK1-210ENST00000592299 PTPRKQ15262 1439 aa34.12■■■■□ 3.05
SPHK1-210ENST00000592299 MAPKBP1O60336 1514 aa34.12■■■■□ 3.05
SPHK1-210ENST00000592299 PLCH2O75038 1416 aa34.11■■■■□ 3.05
SPHK1-210ENST00000592299 ABCA9Q8IUA7 1624 aa34.11■■■■□ 3.05
SPHK1-210ENST00000592299 DNMT1P26358 1616 aaKnown RBP34.07■■■■□ 3.04
SPHK1-210ENST00000592299 DAPK1P53355 1430 aa34.07■■■■□ 3.04
SPHK1-210ENST00000592299 CHIC2Q9UKJ5 165 aa34.06■■■■□ 3.04
SPHK1-210ENST00000592299 SAMD9LQ8IVG5 1584 aa34.05■■■■□ 3.04
SPHK1-210ENST00000592299 EFCAB2Q5VUJ9 269 aa34.04■■■■□ 3.04
SPHK1-210ENST00000592299 ABCC5O15440 1437 aa34.04■■■■□ 3.04
SPHK1-210ENST00000592299 HNRNPMP52272 730 aaKnown RBP eCLIP34■■■■□ 3.03
SPHK1-210ENST00000592299 SETD5Q9C0A6 1442 aa33.99■■■■□ 3.03
SPHK1-210ENST00000592299 ARAP3Q8WWN8 1544 aa33.98■■■■□ 3.03
SPHK1-210ENST00000592299 CD109Q6YHK3 1445 aa33.94■■■■□ 3.02
SPHK1-210ENST00000592299 RAB3GAP2Q9H2M9 1393 aa33.94■■■■□ 3.02
SPHK1-210ENST00000592299 PLEKHH2Q8IVE3 1493 aa33.94■■■■□ 3.02
SPHK1-210ENST00000592299 CCER1Q8TC90 406 aaPredicted RBP33.93■■■■□ 3.02
SPHK1-210ENST00000592299 RRP7BPQ9NSQ0 103 aa33.93■■■■□ 3.02
SPHK1-210ENST00000592299 SYCP2Q9BX26 1530 aa33.93■■■■□ 3.02
SPHK1-210ENST00000592299 FANCAO15360 1455 aa33.92■■■■□ 3.02
SPHK1-210ENST00000592299 MBD5Q9P267 1494 aa33.92■■■■□ 3.02
SPHK1-210ENST00000592299 HFM1A2PYH4 1435 aa33.92■■■■□ 3.02
SPHK1-210ENST00000592299 CROCC2H7BZ55 1655 aa33.91■■■■□ 3.02
SPHK1-210ENST00000592299 ARHGEF5Q12774 1597 aa33.91■■■■□ 3.02
SPHK1-210ENST00000592299 AKNAQ7Z591 1439 aa33.89■■■■□ 3.02
SPHK1-210ENST00000592299 KIAA1107Q9UPP5 1409 aa33.89■■■■□ 3.02
SPHK1-210ENST00000592299 TSPY4P0CV99 314 aa33.88■■■■□ 3.01
SPHK1-210ENST00000592299 TSPY10P0CW01 314 aa33.88■■■■□ 3.01
SPHK1-210ENST00000592299 RSPH4AQ5TD94 716 aa33.88■■■■□ 3.01
SPHK1-210ENST00000592299 NAIPQ13075 1403 aa33.87■■■■□ 3.01
SPHK1-210ENST00000592299 CCDC141Q6ZP82 1450 aa33.87■■■■□ 3.01
SPHK1-210ENST00000592299 DNAJC5Q9H3Z4 198 aa33.86■■■■□ 3.01
SPHK1-210ENST00000592299 ROCK1Q13464 1354 aa33.86■■■■□ 3.01
SPHK1-210ENST00000592299 ABCC1P33527 1531 aa33.85■■■■□ 3.01
SPHK1-210ENST00000592299 FAM69CQ0P6D2 419 aa33.85■■■■□ 3.01
SPHK1-210ENST00000592299 GLI2P10070 1586 aa33.83■■■■□ 3.01
SPHK1-210ENST00000592299 ARHGEF12Q9NZN5 1544 aa33.83■■■■□ 3.01
SPHK1-210ENST00000592299 DIP2BQ9P265 1576 aa33.83■■■■□ 3.01
SPHK1-210ENST00000592299 SHANK2Q9UPX8 1470 aa33.82■■■■□ 3.01
SPHK1-210ENST00000592299 C9orf84Q5VXU9 1444 aa33.82■■■■□ 3.01
SPHK1-210ENST00000592299 ADGBQ8N7X0 1667 aa33.81■■■■□ 3
SPHK1-210ENST00000592299 GCC2Q8IWJ2 1684 aa33.8■■■■□ 3
SPHK1-210ENST00000592299 MAP3K4Q9Y6R4 1608 aa33.79■■■■□ 3
SPHK1-210ENST00000592299 ANKRD30AQ9BXX3 1397 aa33.78■■■■□ 3
SPHK1-210ENST00000592299 HRCP23327 699 aa33.78■■■■□ 3
SPHK1-210ENST00000592299 ADGRL2O95490 1459 aa33.78■■■■□ 3
SPHK1-210ENST00000592299 NCOA1Q15788 1441 aa33.77■■■■□ 3
SPHK1-210ENST00000592299 ADGRL1O94910 1474 aa33.77■■■■□ 3
SPHK1-210ENST00000592299 CFAP74Q9C0B2 1584 aa33.75■■■□□ 2.99
SPHK1-210ENST00000592299 TRAPPC8Q9Y2L5 1435 aa33.74■■■□□ 2.99
SPHK1-210ENST00000592299 SCAPERQ9BY12 1400 aa33.73■■■□□ 2.99
SPHK1-210ENST00000592299 DHX57Q6P158 1386 aaKnown RBP33.69■■■□□ 2.98
SPHK1-210ENST00000592299 AFAP1Q8N556 730 aa33.69■■■□□ 2.98
SPHK1-210ENST00000592299 MAST1Q9Y2H9 1570 aa33.67■■■□□ 2.98
SPHK1-210ENST00000592299 KDM6BO15054 1643 aa33.66■■■□□ 2.98
SPHK1-210ENST00000592299 NEO1Q92859 1461 aa33.66■■■□□ 2.98
SPHK1-210ENST00000592299 TSPOAP1O95153 1857 aa33.64■■■□□ 2.98
SPHK1-210ENST00000592299 KIF15Q9NS87 1388 aa33.63■■■□□ 2.97
SPHK1-210ENST00000592299 KIF13AQ9H1H9 1805 aa33.63■■■□□ 2.97
SPHK1-210ENST00000592299 SPAG9O60271 1321 aaKnown RBP33.63■■■□□ 2.97
SPHK1-210ENST00000592299 ZEB1P37275 1124 aaPredicted RBP33.59■■■□□ 2.97
SPHK1-210ENST00000592299 ANKRD50Q9ULJ7 1429 aa33.59■■■□□ 2.97
SPHK1-210ENST00000592299 TRIM52Q96A61 297 aa33.58■■■□□ 2.97
SPHK1-210ENST00000592299 MYT1LQ9UL68 1186 aa33.57■■■□□ 2.96
SPHK1-210ENST00000592299 ZNF518AQ6AHZ1 1483 aa33.56■■■□□ 2.96
SPHK1-210ENST00000592299 PLXNC1O60486 1568 aa33.55■■■□□ 2.96
SPHK1-210ENST00000592299 RTEL1-TNFRSF6BF6WH68 1400 aa33.54■■■□□ 2.96
SPHK1-210ENST00000592299 PPRC1Q5VV67 1664 aaKnown RBP33.53■■■□□ 2.96
SPHK1-210ENST00000592299 TEX14Q8IWB6 1497 aa33.53■■■□□ 2.96
SPHK1-210ENST00000592299 POGZQ7Z3K3 1410 aa33.52■■■□□ 2.96
SPHK1-210ENST00000592299 ZFYVE16Q7Z3T8 1539 aa33.52■■■□□ 2.96
SPHK1-210ENST00000592299 ACIN1Q9UKV3 1341 aaKnown RBP33.51■■■□□ 2.95
SPHK1-210ENST00000592299 DENND4BO75064 1496 aaPredicted RBP33.5■■■□□ 2.95
SPHK1-210ENST00000592299 ATP7AQ04656 1500 aa33.49■■■□□ 2.95
SPHK1-210ENST00000592299 CLSPNQ9HAW4 1339 aa33.48■■■□□ 2.95
SPHK1-210ENST00000592299 INO80Q9ULG1 1556 aaPredicted RBP33.48■■■□□ 2.95
SPHK1-210ENST00000592299 RAPGEF3O95398 923 aa33.47■■■□□ 2.95
SPHK1-210ENST00000592299 DUOX2Q9NRD8 1548 aa33.45■■■□□ 2.95
SPHK1-210ENST00000592299 KDM5CP41229 1560 aa33.44■■■□□ 2.94
SPHK1-210ENST00000592299 KIDINS220Q9ULH0 1771 aa33.4■■■□□ 2.94
SPHK1-210ENST00000592299 TRHP20396 242 aaPredicted RBP33.4■■■□□ 2.94
SPHK1-210ENST00000592299 RICTORQ6R327 1708 aa33.39■■■□□ 2.94
SPHK1-210ENST00000592299 MPHOSPH9Q99550 1183 aa33.37■■■□□ 2.93
SPHK1-210ENST00000592299 HECW2Q9P2P5 1572 aa33.37■■■□□ 2.93
SPHK1-210ENST00000592299 ERBINQ96RT1 1412 aa33.37■■■□□ 2.93
SPHK1-210ENST00000592299 MLH3Q9UHC1 1453 aa33.37■■■□□ 2.93
SPHK1-210ENST00000592299 SLC4A1APQ9BWU0 796 aaKnown RBP33.33■■■□□ 2.93
SPHK1-210ENST00000592299 NUP155O75694 1391 aa33.32■■■□□ 2.93
SPHK1-210ENST00000592299 FRMPD1Q5SYB0 1578 aa33.29■■■□□ 2.92
SPHK1-210ENST00000592299 DHX29Q7Z478 1369 aaKnown RBP33.28■■■□□ 2.92
SPHK1-210ENST00000592299 PZPP20742 1482 aa33.27■■■□□ 2.92
SPHK1-210ENST00000592299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.27■■■□□ 2.928e-8■■■□□ 17.9
SPHK1-210ENST00000592299 ABCA6Q8N139 1617 aa33.23■■■□□ 2.91
SPHK1-210ENST00000592299 A2MP01023 1474 aa33.23■■■□□ 2.91
SPHK1-210ENST00000592299 UNC13BO14795 1591 aa33.23■■■□□ 2.91
SPHK1-210ENST00000592299 KDM5DQ9BY66 1539 aa33.22■■■□□ 2.91
SPHK1-210ENST00000592299 FOXD1Q16676 465 aa33.22■■■□□ 2.91
SPHK1-210ENST00000592299 ZMYM4Q5VZL5 1548 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms